RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ADMP35318 185 aa17.63■□□□□ 0.41
CCDC47-204ENST00000582252 PSG9Q00887 426 aa17.63■□□□□ 0.41
CCDC47-204ENST00000582252 ATP5G2Q06055 141 aa17.63■□□□□ 0.41
CCDC47-204ENST00000582252 WDR73Q6P4I2 378 aa17.63■□□□□ 0.41
CCDC47-204ENST00000582252 SIGLEC15Q6ZMC9 328 aa17.63■□□□□ 0.41
CCDC47-204ENST00000582252 EXOC3-AS1Q8N2X6 119 aa17.63■□□□□ 0.41
CCDC47-204ENST00000582252 IGF1P05019 195 aa17.62■□□□□ 0.41
CCDC47-204ENST00000582252 C19orf54Q5BKX5 351 aa17.62■□□□□ 0.41
CCDC47-204ENST00000582252 TMEM183AQ8IXX5 376 aa17.62■□□□□ 0.41
CCDC47-204ENST00000582252 HIST3H2BBQ8N257 126 aa17.62■□□□□ 0.41
CCDC47-204ENST00000582252 CIARTQ8N365 385 aaPredicted RBP17.62■□□□□ 0.41
CCDC47-204ENST00000582252 XKRY2A2RUG3 117 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 CLEC3BP05452 202 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 RELQ04864 619 aaPredicted RBP17.61■□□□□ 0.41
CCDC47-204ENST00000582252 LY6EQ16553 131 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 COA6Q5JTJ3 125 aaKnown RBP17.61■□□□□ 0.41
CCDC47-204ENST00000582252 TMEM75Q8N9X5 138 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 MLST8Q9BVC4 326 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 ZNF492Q9P255 531 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 SERTM2A0A1B0GWG4 89 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 H3BUA1 57 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 AVPP01185 164 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 MT-ND6P03923 174 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 PRR27Q6MZM9 219 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 GOLT1AQ6ZVE7 132 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 Q86TA4 180 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 ARL6IP6Q8N6S5 226 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 NUDT10Q8NFP7 164 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 NUDT11Q96G61 164 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 GNB4Q9HAV0 340 aa17.61■□□□□ 0.41
CCDC47-204ENST00000582252 SMAD7O15105 426 aaKnown RBP17.6■□□□□ 0.41
CCDC47-204ENST00000582252 BRI3O95415 125 aa17.6■□□□□ 0.41
CCDC47-204ENST00000582252 IGHG2P01859 326 aa17.6■□□□□ 0.41
CCDC47-204ENST00000582252 CSN1S1P47710 185 aa17.6■□□□□ 0.41
CCDC47-204ENST00000582252 CLEC19AQ6UXS0 136 aa17.6■□□□□ 0.41
CCDC47-204ENST00000582252 MS4A10Q96PG2 267 aa17.6■□□□□ 0.41
CCDC47-204ENST00000582252 GNB1LQ9BYB4 327 aa17.6■□□□□ 0.41
CCDC47-204ENST00000582252 IZUMO1RA6ND01 250 aa17.59■□□□□ 0.41
CCDC47-204ENST00000582252 TOMM20LQ6UXN7 152 aa17.59■□□□□ 0.41
CCDC47-204ENST00000582252 DAZAP1Q96EP5 407 aaKnown RBP17.59■□□□□ 0.41
CCDC47-204ENST00000582252 CCDC140Q96MF4 163 aa17.59■□□□□ 0.41
CCDC47-204ENST00000582252 ZNF253O75346 499 aa17.58■□□□□ 0.41
CCDC47-204ENST00000582252 C17orf77Q96MU5 243 aa17.58■□□□□ 0.41
CCDC47-204ENST00000582252 CT83Q5H943 113 aa17.58■□□□□ 0.4
CCDC47-204ENST00000582252 BCL6BQ8N143 479 aaPredicted RBP17.58■□□□□ 0.4
CCDC47-204ENST00000582252 SGK494Q96LW2 274 aa17.58■□□□□ 0.4
CCDC47-204ENST00000582252 ZFAND3Q9H8U3 227 aa17.58■□□□□ 0.4
CCDC47-204ENST00000582252 ZFP30Q9Y2G7 519 aa17.58■□□□□ 0.4
CCDC47-204ENST00000582252 TRGV3P03979 118 aa17.57■□□□□ 0.4
CCDC47-204ENST00000582252 IER3P46695 156 aa17.57■□□□□ 0.4
CCDC47-204ENST00000582252 RASL11AQ6T310 242 aa17.57■□□□□ 0.4
CCDC47-204ENST00000582252 GPR61Q9BZJ8 451 aa17.57■□□□□ 0.4
CCDC47-204ENST00000582252 MRPL18Q9H0U6 180 aaKnown RBP17.57■□□□□ 0.4
CCDC47-204ENST00000582252 NAT8BQ9UHF3 227 aa17.57■□□□□ 0.4
CCDC47-204ENST00000582252 SNURFLB1AK76 121 aa17.56■□□□□ 0.4
CCDC47-204ENST00000582252 DIRC3C9JPN6 131 aa17.56■□□□□ 0.4
CCDC47-204ENST00000582252 CBLN1P23435 193 aa17.56■□□□□ 0.4
CCDC47-204ENST00000582252 TCL1AP56279 114 aa17.56■□□□□ 0.4
CCDC47-204ENST00000582252 PRNTQ86SH4 94 aa17.56■□□□□ 0.4
CCDC47-204ENST00000582252 TSKUQ8WUA8 353 aa17.56■□□□□ 0.4
CCDC47-204ENST00000582252 RPP21Q9H633 154 aaKnown RBP17.56■□□□□ 0.4
CCDC47-204ENST00000582252 FBLL1A6NHQ2 334 aaKnown RBP17.55■□□□□ 0.4
CCDC47-204ENST00000582252 IFITM10A6NMD0 228 aa17.55■□□□□ 0.4
CCDC47-204ENST00000582252 P01737 135 aa17.55■□□□□ 0.4
CCDC47-204ENST00000582252 PSG3Q16557 428 aa17.55■□□□□ 0.4
CCDC47-204ENST00000582252 GFI1BQ5VTD9 330 aa17.55■□□□□ 0.4
CCDC47-204ENST00000582252 USMG5Q96IX5 58 aa17.55■□□□□ 0.4
CCDC47-204ENST00000582252 SONP18583 2426 aaKnown RBP17.55■□□□□ 0.4
CCDC47-204ENST00000582252 A8MWL6 223 aa17.55■□□□□ 0.4
CCDC47-204ENST00000582252 PDZD11Q5EBL8 140 aa17.55■□□□□ 0.4
CCDC47-204ENST00000582252 METTL26Q96S19 204 aa17.55■□□□□ 0.4
CCDC47-204ENST00000582252 ZNF331Q9NQX6 463 aaPredicted RBP17.55■□□□□ 0.4
CCDC47-204ENST00000582252 SOX21Q9Y651 276 aaPredicted RBP17.55■□□□□ 0.4
CCDC47-204ENST00000582252 C19orf71A6NCJ1 209 aa17.54■□□□□ 0.4
CCDC47-204ENST00000582252 IGLV2-11P01706 119 aa17.54■□□□□ 0.4
CCDC47-204ENST00000582252 HLA-DQA1P01909 254 aa17.54■□□□□ 0.4
CCDC47-204ENST00000582252 TPPP2P59282 170 aa17.54■□□□□ 0.4
CCDC47-204ENST00000582252 C1orf194Q5T5A4 169 aa17.54■□□□□ 0.4
CCDC47-204ENST00000582252 TEX29Q8N6K0 151 aa17.54■□□□□ 0.4
CCDC47-204ENST00000582252 OR4B1Q8NGF8 309 aa17.54■□□□□ 0.4
CCDC47-204ENST00000582252 OTOGQ6ZRI0 2925 aa17.54■□□□□ 0.4
CCDC47-204ENST00000582252 FSHBP01225 129 aa17.53■□□□□ 0.4
CCDC47-204ENST00000582252 GBGT1Q8N5D6 347 aa17.53■□□□□ 0.4
CCDC47-204ENST00000582252 PRSS22Q9GZN4 317 aa17.53■□□□□ 0.4
CCDC47-204ENST00000582252 LINC00527Q9UJ94 153 aa17.53■□□□□ 0.4
CCDC47-204ENST00000582252 ZNF580Q9UK33 172 aa17.53■□□□□ 0.4
CCDC47-204ENST00000582252 PSG8Q9UQ74 426 aa17.53■□□□□ 0.4
CCDC47-204ENST00000582252 A0A087X0K7 114 aa17.52■□□□□ 0.4
CCDC47-204ENST00000582252 TRAV8-1A0A0A6YYK1 113 aa17.52■□□□□ 0.4
CCDC47-204ENST00000582252 IGHV3-35A0A0C4DH35 117 aa17.52■□□□□ 0.4
CCDC47-204ENST00000582252 CA1P00915 261 aaPredicted RBP17.52■□□□□ 0.4
CCDC47-204ENST00000582252 FABP4P15090 132 aa17.52■□□□□ 0.4
CCDC47-204ENST00000582252 WIPF2Q8TF74 440 aaPredicted RBP17.52■□□□□ 0.4
CCDC47-204ENST00000582252 BUB3O43684 328 aa17.52■□□□□ 0.39
CCDC47-204ENST00000582252 PPIFP30405 207 aaKnown RBP17.52■□□□□ 0.39
CCDC47-204ENST00000582252 ATP5L2Q7Z4Y8 100 aa17.52■□□□□ 0.39
CCDC47-204ENST00000582252 OR10D4PQ8NGN7 298 aa17.52■□□□□ 0.39
CCDC47-204ENST00000582252 GFRA4Q9GZZ7 299 aa17.52■□□□□ 0.39
CCDC47-204ENST00000582252 CD5LO43866 347 aa17.51■□□□□ 0.39
CCDC47-204ENST00000582252 SPINK4O60575 86 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms