RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 TMEM182Q6ZP80 229 aaPredicted RBP8.67□□□□□ -1.02
SS18-219ENST00000581570 LRRC20Q8TCA0 184 aa8.67□□□□□ -1.02
SS18-219ENST00000581570 YIPF6Q96EC8 236 aa8.67□□□□□ -1.02
SS18-219ENST00000581570 PRR13Q9NZ81 148 aa8.67□□□□□ -1.02
SS18-219ENST00000581570 GPR132Q9UNW8 380 aa8.67□□□□□ -1.02
SS18-219ENST00000581570 KCNIP3Q9Y2W7 256 aa8.67□□□□□ -1.02
SS18-219ENST00000581570 RPL7P18124 248 aaKnown RBP8.66□□□□□ -1.02
SS18-219ENST00000581570 KIR3DS1Q14943 382 aa8.66□□□□□ -1.02
SS18-219ENST00000581570 FAAP20Q6NZ36 180 aa8.66□□□□□ -1.02
SS18-219ENST00000581570 LYZL2Q7Z4W2 148 aa8.66□□□□□ -1.02
SS18-219ENST00000581570 OR1S1Q8NH92 325 aa8.66□□□□□ -1.02
SS18-219ENST00000581570 TMEM70Q9BUB7 260 aa8.66□□□□□ -1.02
SS18-219ENST00000581570 TRAV9-2A0A087WT02 112 aa8.65□□□□□ -1.02
SS18-219ENST00000581570 A0A0B4J2A0 478 aa8.65□□□□□ -1.02
SS18-219ENST00000581570 DISC1C4P0D8 188 aa8.65□□□□□ -1.02
SS18-219ENST00000581570 H3BRN7 92 aa8.65□□□□□ -1.02
SS18-219ENST00000581570 IAPPP10997 89 aa8.65□□□□□ -1.02
SS18-219ENST00000581570 AKR1C4P17516 323 aa8.65□□□□□ -1.02
SS18-219ENST00000581570 Q6ZTI0 123 aa8.65□□□□□ -1.02
SS18-219ENST00000581570 SYT8Q8NBV8 401 aa8.65□□□□□ -1.02
SS18-219ENST00000581570 RPUSD4Q96CM3 377 aaKnown RBP8.65□□□□□ -1.02
SS18-219ENST00000581570 SHPKQ9UHJ6 478 aa8.65□□□□□ -1.02
SS18-219ENST00000581570 TRGV2A0A075B6R0 118 aa8.64□□□□□ -1.03
SS18-219ENST00000581570 RAP2BP61225 183 aa8.64□□□□□ -1.03
SS18-219ENST00000581570 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
SS18-219ENST00000581570 GFI1BQ5VTD9 330 aa8.64□□□□□ -1.03
SS18-219ENST00000581570 MZT2AQ6P582 158 aa8.64□□□□□ -1.03
SS18-219ENST00000581570 SHANK2-AS3Q9BTD1 123 aa8.64□□□□□ -1.03
SS18-219ENST00000581570 PARD6GQ9BYG4 376 aaPredicted RBP8.64□□□□□ -1.03
SS18-219ENST00000581570 EXTL2Q9UBQ6 330 aa8.64□□□□□ -1.03
SS18-219ENST00000581570 HIGD1AQ9Y241 93 aa8.64□□□□□ -1.03
SS18-219ENST00000581570 HMCN2Q8NDA2 5059 aa8.64□□□□□ -1.03
SS18-219ENST00000581570 A0A087X0K7 114 aa8.63□□□□□ -1.03
SS18-219ENST00000581570 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
SS18-219ENST00000581570 NCS1P62166 190 aa8.63□□□□□ -1.03
SS18-219ENST00000581570 CCDC190Q86UF4 302 aa8.63□□□□□ -1.03
SS18-219ENST00000581570 C15orf40Q8WUR7 153 aa8.63□□□□□ -1.03
SS18-219ENST00000581570 MSRB1Q9NZV6 116 aa8.63□□□□□ -1.03
SS18-219ENST00000581570 ICOSQ9Y6W8 199 aa8.63□□□□□ -1.03
SS18-219ENST00000581570 NPIPB6E9PJ23 425 aa8.62□□□□□ -1.03
SS18-219ENST00000581570 PAX4O43316 350 aa8.62□□□□□ -1.03
SS18-219ENST00000581570 HYPMO75409 117 aa8.62□□□□□ -1.03
SS18-219ENST00000581570 IL5P05113 134 aa8.62□□□□□ -1.03
SS18-219ENST00000581570 VBP1P61758 197 aa8.62□□□□□ -1.03
SS18-219ENST00000581570 RPP30P78346 268 aaKnown RBP8.62□□□□□ -1.03
SS18-219ENST00000581570 AKR1C1Q04828 323 aa8.62□□□□□ -1.03
SS18-219ENST00000581570 LYPD5Q6UWN5 251 aa8.62□□□□□ -1.03
SS18-219ENST00000581570 LY96Q9Y6Y9 160 aa8.62□□□□□ -1.03
SS18-219ENST00000581570 TRAV12-3A0A0B4J271 114 aa8.61□□□□□ -1.03
SS18-219ENST00000581570 PRSS46E5RG02 174 aa8.61□□□□□ -1.03
SS18-219ENST00000581570 J3KRW8 73 aa8.61□□□□□ -1.03
SS18-219ENST00000581570 PITX3O75364 302 aa8.61□□□□□ -1.03
SS18-219ENST00000581570 ZNF324O75467 553 aaPredicted RBP8.61□□□□□ -1.03
SS18-219ENST00000581570 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
SS18-219ENST00000581570 OR5G3P0C626 314 aa8.61□□□□□ -1.03
SS18-219ENST00000581570 SSBP1Q04837 148 aaKnown RBP8.61□□□□□ -1.03
SS18-219ENST00000581570 CYP2G1PQ6ZSU1 146 aa8.61□□□□□ -1.03
SS18-219ENST00000581570 DEFB104AQ8WTQ1 72 aa8.61□□□□□ -1.03
SS18-219ENST00000581570 PRRT1Q99946 306 aa8.61□□□□□ -1.03
SS18-219ENST00000581570 PYGO2Q9BRQ0 406 aa8.61□□□□□ -1.03
SS18-219ENST00000581570 TRGV1A0A0A0MS02 117 aa8.6□□□□□ -1.03
SS18-219ENST00000581570 MED6O75586 246 aa8.6□□□□□ -1.03
SS18-219ENST00000581570 AKAIN1P0CW23 69 aa8.6□□□□□ -1.03
SS18-219ENST00000581570 ANXA7P20073 488 aaKnown RBP8.6□□□□□ -1.03
SS18-219ENST00000581570 SRPXP78539 464 aa8.6□□□□□ -1.03
SS18-219ENST00000581570 S100A7AQ86SG5 101 aa8.6□□□□□ -1.03
SS18-219ENST00000581570 OR51S1Q8NGJ8 323 aa8.6□□□□□ -1.03
SS18-219ENST00000581570 CIB3Q96Q77 187 aaPredicted RBP8.6□□□□□ -1.03
SS18-219ENST00000581570 LINC00467Q9BRT7 94 aa8.6□□□□□ -1.03
SS18-219ENST00000581570 ZNF331Q9NQX6 463 aaPredicted RBP8.6□□□□□ -1.03
SS18-219ENST00000581570 GSN-AS1Q9NRJ2 163 aa8.6□□□□□ -1.03
SS18-219ENST00000581570 FAM30AQ9NZY2 134 aa8.6□□□□□ -1.03
SS18-219ENST00000581570 FUT9Q9Y231 359 aa8.6□□□□□ -1.03
SS18-219ENST00000581570 DNAH8Q96JB1 4490 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 PMS2P5A8MQ11 134 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 PRAC2D3DTV9 90 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 K7EP13 123 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 WRBO00258 174 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 LINC00869P0C866 280 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 ANXA3P12429 323 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 CXCL2P19875 107 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 EVI2AP22794 236 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 PLP1P60201 277 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 ACOT7LQ6ZUV0 252 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 CLVS1Q8IUQ0 354 aaPredicted RBP8.59□□□□□ -1.03
SS18-219ENST00000581570 NTN5Q8WTR8 489 aaPredicted RBP8.59□□□□□ -1.03
SS18-219ENST00000581570 AP3S1Q92572 193 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 SCGB3A2Q96PL1 93 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 SLC50A1Q9BRV3 221 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 VCX3AQ9NNX9 186 aa8.59□□□□□ -1.03
SS18-219ENST00000581570 SMCO3A2RU48 225 aa8.58□□□□□ -1.04
SS18-219ENST00000581570 MRPS12O15235 138 aaKnown RBP8.58□□□□□ -1.04
SS18-219ENST00000581570 IGHV3-53P01767 116 aa8.58□□□□□ -1.04
SS18-219ENST00000581570 SNRPCP09234 159 aaKnown RBP8.58□□□□□ -1.04
SS18-219ENST00000581570 LEPP41159 167 aa8.58□□□□□ -1.04
SS18-219ENST00000581570 MRPS10P82664 201 aaKnown RBP8.58□□□□□ -1.04
SS18-219ENST00000581570 MRPL23Q16540 153 aaKnown RBP8.58□□□□□ -1.04
SS18-219ENST00000581570 SPANXN5Q5MJ07 72 aa8.58□□□□□ -1.04
SS18-219ENST00000581570 LCN15Q6UWW0 184 aa8.58□□□□□ -1.04
SS18-219ENST00000581570 NEGR1Q7Z3B1 354 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms