RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PPT1P50897 306 aa10.73□□□□□ -0.69
SKA2-205ENST00000580541 UBE2L3P68036 154 aaKnown RBP10.73□□□□□ -0.69
SKA2-205ENST00000580541 LYPD1Q8N2G4 141 aa10.73□□□□□ -0.69
SKA2-205ENST00000580541 SAT2Q96F10 170 aaPredicted RBP10.73□□□□□ -0.69
SKA2-205ENST00000580541 FAM110AQ9BQ89 295 aa10.73□□□□□ -0.69
SKA2-205ENST00000580541 AAMDCQ9H7C9 122 aa10.73□□□□□ -0.69
SKA2-205ENST00000580541 SMAD5-AS1Q9Y6J3 95 aa10.73□□□□□ -0.69
SKA2-205ENST00000580541 MAP1LC3B2A6NCE7 125 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 IZUMO1RA6ND01 250 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 G3V4G9 280 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 K7EQG2 157 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 MRPS12O15235 138 aaKnown RBP10.72□□□□□ -0.69
SKA2-205ENST00000580541 ARL14EPLP0DKL9 152 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 IGLC2P0DOY2 106 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 PSMB3P49720 205 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 BEAN1Q3B7T3 259 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 FAM74A1Q5RGS3 127 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 IQCF2Q8IXL9 164 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 DCANP1Q8TF63 244 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 MAP1LC3BQ9GZQ8 125 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 SELENOKQ9Y6D0 94 aa10.72□□□□□ -0.69
SKA2-205ENST00000580541 TRBV19A0A075B6N1 114 aa10.71□□□□□ -0.69
SKA2-205ENST00000580541 TRAV1-1A0A0B4J248 108 aa10.71□□□□□ -0.69
SKA2-205ENST00000580541 HMGB3O15347 200 aaKnown RBP10.71□□□□□ -0.69
SKA2-205ENST00000580541 OR10J4P0C629 311 aa10.71□□□□□ -0.69
SKA2-205ENST00000580541 PYYP10082 97 aa10.71□□□□□ -0.69
SKA2-205ENST00000580541 GCHFRP30047 84 aa10.71□□□□□ -0.69
SKA2-205ENST00000580541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.71□□□□□ -0.69
SKA2-205ENST00000580541 ZNF680Q8NEM1 530 aa10.71□□□□□ -0.69
SKA2-205ENST00000580541 BLNKQ8WV28 456 aa10.71□□□□□ -0.69
SKA2-205ENST00000580541 NKX6-2Q9C056 277 aaPredicted RBP10.71□□□□□ -0.69
SKA2-205ENST00000580541 ZNF586Q9NXT0 402 aa10.71□□□□□ -0.69
SKA2-205ENST00000580541 UBQLN2Q9UHD9 624 aa10.71□□□□□ -0.69
SKA2-205ENST00000580541 PRELID1Q9Y255 219 aa10.71□□□□□ -0.69
SKA2-205ENST00000580541 OR11H12B2RN74 326 aa10.7□□□□□ -0.7
SKA2-205ENST00000580541 H3BQ15 152 aa10.7□□□□□ -0.7
SKA2-205ENST00000580541 FHITP49789 147 aa10.7□□□□□ -0.7
SKA2-205ENST00000580541 RAB14P61106 215 aa10.7□□□□□ -0.7
SKA2-205ENST00000580541 ZNF726P1Q15940 193 aa10.7□□□□□ -0.7
SKA2-205ENST00000580541 FXYD5Q96DB9 178 aa10.7□□□□□ -0.7
SKA2-205ENST00000580541 CD81P60033 236 aa10.69□□□□□ -0.7
SKA2-205ENST00000580541 KPRPQ5T749 579 aaPredicted RBP10.69□□□□□ -0.7
SKA2-205ENST00000580541 SUN5Q8TC36 379 aa10.69□□□□□ -0.7
SKA2-205ENST00000580541 LINC00052Q96N35 136 aa10.69□□□□□ -0.7
SKA2-205ENST00000580541 ZNF331Q9NQX6 463 aaPredicted RBP10.69□□□□□ -0.7
SKA2-205ENST00000580541 CSN1S1P47710 185 aa10.68□□□□□ -0.7
SKA2-205ENST00000580541 FGF8P55075 233 aaPredicted RBP10.68□□□□□ -0.7
SKA2-205ENST00000580541 RANP62826 216 aaKnown RBP10.68□□□□□ -0.7
SKA2-205ENST00000580541 PSG3Q16557 428 aa10.68□□□□□ -0.7
SKA2-205ENST00000580541 ZNF767PQ75MW2 155 aa10.68□□□□□ -0.7
SKA2-205ENST00000580541 RXFP4Q8TDU9 374 aa10.68□□□□□ -0.7
SKA2-205ENST00000580541 MRPL53Q96EL3 112 aaKnown RBP10.68□□□□□ -0.7
SKA2-205ENST00000580541 ZNF503Q96F45 646 aa10.68□□□□□ -0.7
SKA2-205ENST00000580541 A0A1W2PRE2 83 aa10.67□□□□□ -0.7
SKA2-205ENST00000580541 SOCS3O14543 225 aa10.67□□□□□ -0.7
SKA2-205ENST00000580541 IFNA1P01562 189 aa10.67□□□□□ -0.7
SKA2-205ENST00000580541 ZNF688P0C7X2 276 aa10.67□□□□□ -0.7
SKA2-205ENST00000580541 TAGLN2P37802 199 aaKnown RBP10.67□□□□□ -0.7
SKA2-205ENST00000580541 PSMG4Q5JS54 123 aa10.67□□□□□ -0.7
SKA2-205ENST00000580541 EBLN2Q6P2I7 272 aa10.67□□□□□ -0.7
SKA2-205ENST00000580541 ARL6IP6Q8N6S5 226 aa10.67□□□□□ -0.7
SKA2-205ENST00000580541 CMTM2Q8TAZ6 248 aa10.67□□□□□ -0.7
SKA2-205ENST00000580541 C17orf77Q96MU5 243 aa10.67□□□□□ -0.7
SKA2-205ENST00000580541 OTORQ9NRC9 128 aa10.67□□□□□ -0.7
SKA2-205ENST00000580541 ARL2-SNX15V9GYD0 113 aa10.67□□□□□ -0.7
SKA2-205ENST00000580541 MGAM2Q2M2H8 2515 aa10.66□□□□□ -0.7
SKA2-205ENST00000580541 PKD1L1Q8TDX9 2849 aa10.66□□□□□ -0.7
SKA2-205ENST00000580541 SNRPCP09234 159 aaKnown RBP10.66□□□□□ -0.7
SKA2-205ENST00000580541 DEFB131AP59861 70 aa10.66□□□□□ -0.7
SKA2-205ENST00000580541 KRTAP10-11P60412 298 aa10.66□□□□□ -0.7
SKA2-205ENST00000580541 PMS2P11Q13670 270 aa10.66□□□□□ -0.7
SKA2-205ENST00000580541 SSX7Q7RTT5 188 aa10.66□□□□□ -0.7
SKA2-205ENST00000580541 ZNF738Q8NE65 137 aa10.66□□□□□ -0.7
SKA2-205ENST00000580541 TXNDC17Q9BRA2 123 aa10.66□□□□□ -0.7
SKA2-205ENST00000580541 MANBALQ9NQG1 85 aa10.66□□□□□ -0.7
SKA2-205ENST00000580541 PGPA6NDG6 321 aa10.65□□□□□ -0.7
SKA2-205ENST00000580541 H3BTX0 84 aa10.65□□□□□ -0.7
SKA2-205ENST00000580541 EIF3GO75821 320 aaKnown RBP eCLIP10.65□□□□□ -0.7
SKA2-205ENST00000580541 NDUFB4O95168 129 aa10.65□□□□□ -0.7
SKA2-205ENST00000580541 CD7P09564 240 aa10.65□□□□□ -0.7
SKA2-205ENST00000580541 ICAM4Q14773 271 aa10.65□□□□□ -0.7
SKA2-205ENST00000580541 PRR25Q96S07 402 aa10.65□□□□□ -0.7
SKA2-205ENST00000580541 Q9H3A6 140 aa10.65□□□□□ -0.7
SKA2-205ENST00000580541 TUBA4BQ9H853 241 aa10.65□□□□□ -0.7
SKA2-205ENST00000580541 MAP6D1Q9H9H5 199 aa10.65□□□□□ -0.7
SKA2-205ENST00000580541 TRAV8-2A0A0B4J237 113 aa10.64□□□□□ -0.71
SKA2-205ENST00000580541 A0A1B0GV50 99 aa10.64□□□□□ -0.71
SKA2-205ENST00000580541 F6UZH7 168 aa10.64□□□□□ -0.71
SKA2-205ENST00000580541 K7EQM0 130 aa10.64□□□□□ -0.71
SKA2-205ENST00000580541 DUSP14O95147 198 aaKnown RBP10.64□□□□□ -0.71
SKA2-205ENST00000580541 CST9LP1Q5W188 147 aa10.64□□□□□ -0.71
SKA2-205ENST00000580541 FOXI2Q6ZQN5 318 aa10.64□□□□□ -0.71
SKA2-205ENST00000580541 OR10J6PQ8NGY7 276 aa10.64□□□□□ -0.71
SKA2-205ENST00000580541 RPUSD4Q96CM3 377 aaKnown RBP10.64□□□□□ -0.71
SKA2-205ENST00000580541 TCEAL7Q9BRU2 100 aa10.64□□□□□ -0.71
SKA2-205ENST00000580541 TMPRSS5Q9H3S3 457 aa10.64□□□□□ -0.71
SKA2-205ENST00000580541 SERTM2A0A1B0GWG4 89 aa10.63□□□□□ -0.71
SKA2-205ENST00000580541 SLC17A3O00476 420 aa10.63□□□□□ -0.71
SKA2-205ENST00000580541 SUMO1P63165 101 aaKnown RBP10.63□□□□□ -0.71
SKA2-205ENST00000580541 ODF3L2Q3SX64 289 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms