RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 CHEK1O14757 476 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 CSN3P07498 182 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 C3orf79P0CE67 100 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 ZNF25P17030 456 aaPredicted RBP4.24□□□□□ -1.73
VAPA-203ENST00000577539 CA7P43166 264 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 KLRD1Q13241 179 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 SPATA45Q537H7 98 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 HIST2H2BCQ6DN03 193 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 HIST2H2BDQ6DRA6 164 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 CIARTQ8N365 385 aaPredicted RBP4.24□□□□□ -1.73
VAPA-203ENST00000577539 C11orf42Q8N5U0 333 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 F11RQ9Y624 299 aaKnown RBP4.24□□□□□ -1.73
VAPA-203ENST00000577539 SPG11Q96JI7 2443 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 KIR2DL5BA0A0G2JN68 375 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 KIR2DL5BA0A0G2JPC4 375 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 CBY3A6NI87 242 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 HTR1DP28221 377 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 OR10J3Q5JRS4 329 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 SSX8Q7RTT4 187 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 KIR2DL5AQ8N109 375 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 C11orf44Q8N8P7 122 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 C18orf32Q8TCD1 76 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 TSKUQ8WUA8 353 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 TIMD4Q96H15 378 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 MIEN1Q9BRT3 115 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 IGHV3-35A0A0C4DH35 117 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 A6NNC1 897 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 INS-IGF2F8WCM5 200 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 TCRAP04437 139 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 FCGR2BP31994 310 aaPredicted RBP4.24□□□□□ -1.73
VAPA-203ENST00000577539 NUTF2P61970 127 aaKnown RBP4.24□□□□□ -1.73
VAPA-203ENST00000577539 Q6ZN92 141 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 OR4F17Q8NGA8 305 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 C8orf46Q8TAG6 207 aa4.24□□□□□ -1.73
VAPA-203ENST00000577539 RPP21Q9H633 154 aaKnown RBP4.24□□□□□ -1.73
VAPA-203ENST00000577539 IGHV3OR16-8A0A075B7F1 116 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 TMSB15BA0A087X1C1 80 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 TNFRSF13BO14836 293 aaPredicted RBP4.23□□□□□ -1.73
VAPA-203ENST00000577539 GNG7O60262 68 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 IGLV1-47P01700 117 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 IGHV3-23P01764 117 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 IL4P05112 153 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 PMCHL1Q16048 86 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 GDF5OSQ5U4N7 250 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 CCDC144NLQ6NUI1 221 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 ZNF841Q6ZN19 808 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 TEX43Q6ZNM6 134 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 C8orf31Q8N9H6 132 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 LINC01356Q8N9X3 169 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 OR4B1Q8NGF8 309 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 ZNF479Q96JC4 524 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 SLC25A39Q9BZJ4 359 aaPredicted RBP4.23□□□□□ -1.73
VAPA-203ENST00000577539 RAB1BQ9H0U4 201 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 CLEC5AQ9NY25 188 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 SPTBN4Q9H254 2564 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 K7EQM0 130 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 IGLC1P0CG04 106 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 TFPI2P48307 235 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 HNRNPA3P51991 378 aaKnown RBP4.23□□□□□ -1.73
VAPA-203ENST00000577539 HBBP68871 147 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 LINC00322Q6ZN03 302 aaPredicted RBP4.23□□□□□ -1.73
VAPA-203ENST00000577539 TNFRSF14Q92956 283 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 DPM3Q9P2X0 92 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 K7ENP7 123 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 M0R3E3 92 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 ESDP10768 282 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 PAX1P15863 534 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 FAM231DQ6ZW35 169 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 BPIFA4PQ86YQ2 179 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 C17orf77Q96MU5 243 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 C20orf144Q9BQM9 153 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 ATMQ13315 3056 aa4.23□□□□□ -1.73
VAPA-203ENST00000577539 CHD8Q9HCK8 2581 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 GP9P14770 177 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 MRGPRG-AS1Q2M3A8 158 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 NIT1Q86X76 327 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 FMC1Q96HJ9 113 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 LOC105371242A0A075B767 164 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 NBR2O15453 112 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 SCGB2A1O75556 95 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 TOMM40O96008 361 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 IGKV1-17P01599 117 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 CEACAM3P40198 252 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 ZNF138P52744 262 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 CD300EQ496F6 205 aaPredicted RBP4.22□□□□□ -1.73
VAPA-203ENST00000577539 CYB5R2Q6BCY4 276 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 FAM110AQ9BQ89 295 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 ALKBH7Q9BT30 221 aaPredicted RBP4.22□□□□□ -1.73
VAPA-203ENST00000577539 OTORQ9NRC9 128 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.22□□□□□ -1.738e-10■■□□□ 11.7
VAPA-203ENST00000577539 MUC21A0A0G2JKD1 596 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 MUC21A0A140T8X8 626 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 M0QZK8 103 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 FSTL3O95633 263 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 CT45A10P0DMU9 189 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 RAB4AP20338 218 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 NBL1P41271 181 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 MUC21Q5SSG8 566 aa4.22□□□□□ -1.73
VAPA-203ENST00000577539 Q71RC1 249 aaPredicted RBP4.22□□□□□ -1.73
VAPA-203ENST00000577539 KLHDC1Q8N7A1 406 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 288.5 ms