RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 FRMPD3Q5JV73 1810 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 TRAV12-2A0A075B6T6 113 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 SMIM26A0A096LP01 95 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 TRAV8-2A0A0B4J237 113 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 TRAV8-4A0A0B4J246 113 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 H3BMG7 143 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 SDCBPO00560 298 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 HCRTO43612 131 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 CREBL2O60519 120 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 PDCD6O75340 191 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 GYPAP02724 150 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 SRP19P09132 144 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 ZNF688P0C7X2 276 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 COX7CP15954 63 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 MYCNOSP40205 109 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 ASIPP42127 132 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 QRFPP83859 136 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 ERCC8Q13216 396 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 OR7A5Q15622 319 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 MSMO1Q15800 293 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 RTL8BQ17RB0 113 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 CENPWQ5EE01 88 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 MORN3Q6PF18 240 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 Q6ZQT7 251 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 WDR86Q86TI4 376 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 LINC00596Q86U02 117 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 ZNF101Q8IZC7 436 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 RPP25LQ8N5L8 163 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 LINC00337Q8N6G1 96 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 CYB561D1Q8N8Q1 229 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 OR2A1Q8NGT9 310 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 CMTM2Q8TAZ6 248 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 RPS4Y2Q8TD47 263 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 BRK1Q8WUW1 75 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 FXYD5Q96DB9 178 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 AQP10Q96PS8 301 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 PMCHL2Q9BQD1 86 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 SHANK2-AS3Q9BTD1 123 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 RTL8AQ9BWD3 113 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 MRPL20Q9BYC9 149 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 MANBALQ9NQG1 85 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 LAMTOR3Q9UHA4 124 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 COQ4Q9Y3A0 265 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 FIS1Q9Y3D6 152 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 VWDEQ8N2E2 1590 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 UGGT1Q9NYU2 1555 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 ZCCHC11Q5TAX3 1644 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 HECW1Q76N89 1606 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 RBBP6Q7Z6E9 1792 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 DENND4CQ5VZ89 1909 aa2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 MYO18AQ92614 2054 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-202ENST00000577300 SCN4AP35499 1836 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 TET3O43151 1660 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 CUL7Q14999 1698 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 NWD1Q149M9 1564 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 IGLV1-36A0A0B4J1U3 117 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 TRAV41A0A0B4J266 112 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 DPRXA6NFQ7 191 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 A8MWL6 223 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 H3BP45 60 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 LGALS9O00182 355 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 GNGT2O14610 69 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 SS18L1O75177 396 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 DEDDO75618 318 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 SNCGO76070 127 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 TCL1BO95988 128 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 SOD1P00441 154 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 PTHP01270 115 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 IGHV3-7P01780 117 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 RBP4P02753 201 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 CD3DP04234 171 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 TCRAP04437 139 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 RNASE2P10153 161 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 C1orf140Q5VVS0 124 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 ZNF322Q6U7Q0 402 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 FP248Q71RG6 208 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 LINC00305Q7Z4B0 112 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 FAM19A3Q7Z5A8 133 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 MSRB3Q8IXL7 192 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 OR2T10Q8NGZ9 312 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 OR10AC1Q8NH08 325 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 OR52P1PQ8NH57 321 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 C10orf105Q8TEF2 133 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 PPDPFLQ8WWR9 84 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 NMNAT3Q96T66 252 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 HDHD3Q9BSH5 251 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 DEFB127Q9H1M4 99 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 C11orf68Q9H3H3 251 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 DPH3P1Q9H4G8 78 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 NAA60Q9H7X0 242 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 F11RQ9Y624 299 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 PPLO60437 1756 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 STRCQ7RTU9 1775 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 NESP48681 1621 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 MROH2AA6NES4 1674 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 CITO14578 2027 aa2.12□□□□□ -2.07
SMCHD1-202ENST00000577300 GLI3P10071 1580 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 IGKV1D-8A0A087WSZ0 117 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 TRBV6-7A0A0A0MS04 114 aa2.11□□□□□ -2.07
SMCHD1-202ENST00000577300 IGHV1-58A0A0C4DH39 117 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms