RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 GBGT1Q8N5D6 347 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 C16orf92Q96LL3 132 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 AAMDCQ9H7C9 122 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 NRN1Q9NPD7 142 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 SIGLEC8Q9NYZ4 499 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 SMAD5-AS1Q9Y6J3 95 aa12.48□□□□□ -0.41
ERCC4-208ENST00000576348 RBFOX3A6NFN3 312 aa12.47□□□□□ -0.41
ERCC4-208ENST00000576348 TFPI2P48307 235 aa12.47□□□□□ -0.41
ERCC4-208ENST00000576348 DEFB114Q30KQ6 69 aa12.47□□□□□ -0.41
ERCC4-208ENST00000576348 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.47□□□□□ -0.41
ERCC4-208ENST00000576348 COMMD7Q86VX2 200 aa12.47□□□□□ -0.41
ERCC4-208ENST00000576348 WFDC3Q8IUB2 231 aa12.47□□□□□ -0.41
ERCC4-208ENST00000576348 MDFIQ99750 246 aa12.47□□□□□ -0.41
ERCC4-208ENST00000576348 SLC50A1Q9BRV3 221 aa12.47□□□□□ -0.41
ERCC4-208ENST00000576348 ARL2-SNX15V9GYD0 113 aa12.47□□□□□ -0.41
ERCC4-208ENST00000576348 TENM1Q9UKZ4 2725 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 A0A1W2PRE2 83 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 ID1P41134 155 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 PEA15Q15121 130 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 C9orf66Q5T8R8 295 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 CMTM2Q8TAZ6 248 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 SUN5Q8TC36 379 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 C17orf77Q96MU5 243 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 FAM210AQ96ND0 272 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 NKX6-2Q9C056 277 aaPredicted RBP12.46□□□□□ -0.41
ERCC4-208ENST00000576348 Q9H3A6 140 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 OTORQ9NRC9 128 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 VAX2Q9UIW0 290 aa12.46□□□□□ -0.41
ERCC4-208ENST00000576348 YTHDF2Q9Y5A9 579 aaKnown RBP12.46□□□□□ -0.41
ERCC4-208ENST00000576348 TRAV25A0A0B4J276 109 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 LOC102723971A0A1B0GUV8 181 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 LINC00862A6NCI5 91 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 FAM74A7A6NL05 159 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 C11orf94C9JXX5 98 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 ZNF253O75346 499 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 PMS2P11Q13670 270 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 GUCA2BQ16661 112 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 NDUFA5Q16718 116 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 CD300EQ496F6 205 aaPredicted RBP12.45□□□□□ -0.42
ERCC4-208ENST00000576348 LYPD1Q8N2G4 141 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 RXFP4Q8TDU9 374 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 MS4A6AQ9H2W1 248 aa12.45□□□□□ -0.42
ERCC4-208ENST00000576348 RAB19A4D1S5 217 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 PGPA6NDG6 321 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 SLC17A3O00476 420 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 CSN1S1P47710 185 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 INSL3P51460 131 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 ICAM4Q14773 271 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 ZNF506Q5JVG8 444 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 FAM90A2PQ658T7 463 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 LCN12Q6JVE5 192 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 TMEM61Q8N0U2 210 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 OR2K2Q8NGT1 345 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 RARRES2Q99969 163 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 TXNDC17Q9BRA2 123 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 GPR61Q9BZJ8 451 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 TREM1Q9NP99 234 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 MED9Q9NWA0 146 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 COL6A5A8TX70 2615 aa12.44□□□□□ -0.42
ERCC4-208ENST00000576348 WNK1Q9H4A3 2382 aa12.43□□□□□ -0.42
ERCC4-208ENST00000576348 OR4C46A6NHA9 309 aa12.43□□□□□ -0.42
ERCC4-208ENST00000576348 ISLRO14498 428 aa12.43□□□□□ -0.42
ERCC4-208ENST00000576348 NDUFB4O95168 129 aa12.43□□□□□ -0.42
ERCC4-208ENST00000576348 SLC25A5P05141 298 aaKnown RBP12.43□□□□□ -0.42
ERCC4-208ENST00000576348 ATP5G3P48201 142 aa12.43□□□□□ -0.42
ERCC4-208ENST00000576348 SNRPD3P62318 126 aaKnown RBP12.43□□□□□ -0.42
ERCC4-208ENST00000576348 SUMO1P63165 101 aaKnown RBP12.43□□□□□ -0.42
ERCC4-208ENST00000576348 MEF2BQ02080 365 aaPredicted RBP12.43□□□□□ -0.42
ERCC4-208ENST00000576348 EXOC3-AS1Q8N2X6 119 aa12.43□□□□□ -0.42
ERCC4-208ENST00000576348 LINC00052Q96N35 136 aa12.43□□□□□ -0.42
ERCC4-208ENST00000576348 SPAG8Q99932 426 aaPredicted RBP12.43□□□□□ -0.42
ERCC4-208ENST00000576348 ZNF331Q9NQX6 463 aaPredicted RBP12.43□□□□□ -0.42
ERCC4-208ENST00000576348 CLEC5AQ9NY25 188 aa12.43□□□□□ -0.42
ERCC4-208ENST00000576348 RPH3ALQ9UNE2 315 aa12.43□□□□□ -0.42
ERCC4-208ENST00000576348 F6UZH7 168 aa12.42□□□□□ -0.42
ERCC4-208ENST00000576348 TSPAN4O14817 238 aa12.42□□□□□ -0.42
ERCC4-208ENST00000576348 IGLV1-51P01701 117 aa12.42□□□□□ -0.42
ERCC4-208ENST00000576348 PRELID1Q9Y255 219 aa12.42□□□□□ -0.42
ERCC4-208ENST00000576348 TRAV2A0A0B4J234 112 aa12.41□□□□□ -0.42
ERCC4-208ENST00000576348 GGTLC3B5MD39 225 aa12.41□□□□□ -0.42
ERCC4-208ENST00000576348 PDE6DO43924 150 aa12.41□□□□□ -0.42
ERCC4-208ENST00000576348 CEBPGP53567 150 aa12.41□□□□□ -0.42
ERCC4-208ENST00000576348 IGFL4Q6B9Z1 124 aa12.41□□□□□ -0.42
ERCC4-208ENST00000576348 C5orf17Q8NAS9 161 aa12.41□□□□□ -0.42
ERCC4-208ENST00000576348 ZNF738Q8NE65 137 aa12.41□□□□□ -0.42
ERCC4-208ENST00000576348 WFDC9Q8NEX5 89 aa12.41□□□□□ -0.42
ERCC4-208ENST00000576348 K7EQG2 157 aa12.4□□□□□ -0.42
ERCC4-208ENST00000576348 IGLL1P15814 213 aa12.4□□□□□ -0.42
ERCC4-208ENST00000576348 PRR31Q5SQ13 230 aa12.4□□□□□ -0.42
ERCC4-208ENST00000576348 UQCC3Q6UW78 93 aa12.4□□□□□ -0.42
ERCC4-208ENST00000576348 RNF182Q8N6D2 247 aa12.4□□□□□ -0.42
ERCC4-208ENST00000576348 TCEAL7Q9BRU2 100 aa12.4□□□□□ -0.42
ERCC4-208ENST00000576348 SMDT1Q9H4I9 107 aa12.4□□□□□ -0.42
ERCC4-208ENST00000576348 TRAV8-2A0A0B4J237 113 aa12.39□□□□□ -0.43
ERCC4-208ENST00000576348 K7EQM0 130 aa12.39□□□□□ -0.43
ERCC4-208ENST00000576348 SOCS3O14543 225 aa12.39□□□□□ -0.43
ERCC4-208ENST00000576348 ZNF688P0C7X2 276 aa12.39□□□□□ -0.43
ERCC4-208ENST00000576348 PSG3Q16557 428 aa12.39□□□□□ -0.43
ERCC4-208ENST00000576348 PSMG4Q5JS54 123 aa12.39□□□□□ -0.43
ERCC4-208ENST00000576348 DCANP1Q8TF63 244 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms