RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 TPPP2P59282 170 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 Q0VG73 95 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 C19orf54Q5BKX5 351 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 DMRTA1Q5VZB9 504 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 TOMM20LQ6UXN7 152 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 CLEC19AQ6UXS0 136 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 RBPMS2Q6ZRY4 209 aaKnown RBP5.3□□□□□ -1.56
SMG6-217ENST00000575338 PRNTQ86SH4 94 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 TMEM219Q86XT9 240 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 EXOC3-AS1Q8N2X6 119 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 MBD6Q96DN6 1003 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 GPR61Q9BZJ8 451 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 PRSS22Q9GZN4 317 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 ZFAND3Q9H8U3 227 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 PSG8Q9UQ74 426 aa5.3□□□□□ -1.56
SMG6-217ENST00000575338 FLNBO75369 2602 aaKnown RBP5.3□□□□□ -1.56
SMG6-217ENST00000575338 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.29□□□□□ -1.568e-6■■■■□ 21.9
SMG6-217ENST00000575338 GCN1Q92616 2671 aaKnown RBP5.29□□□□□ -1.56
SMG6-217ENST00000575338 IGHV3OR16-10A0A075B7F0 116 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 HIGD1CA8MV81 97 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 NPIPB6E9PJ23 425 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 TGFAP01135 160 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 APCSP02743 223 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 PRB1P04280 392 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 ESDP10768 282 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 CBLN1P23435 193 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 ARL3P36405 182 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 HBBP68871 147 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 SLC35B1P78383 322 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 SRSF2Q01130 221 aaKnown RBP5.29□□□□□ -1.56
SMG6-217ENST00000575338 RIGQ13278 110 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 FBLN7Q53RD9 439 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 C9orf139Q6ZV77 190 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 COX8CQ7Z4L0 72 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 BAGE3Q86Y29 109 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 NHLRC2Q8NBF2 726 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 OR10D4PQ8NGN7 298 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 PIFOQ8TCI5 191 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 LINC00479Q96M42 142 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 BBC3Q96PG8 261 aaPredicted RBP5.29□□□□□ -1.56
SMG6-217ENST00000575338 NIT2Q9NQR4 276 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 S4R3C0 116 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 ABCA2Q9BZC7 2435 aa5.29□□□□□ -1.56
SMG6-217ENST00000575338 NAV2Q8IVL1 2488 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.28□□□□□ -1.56
SMG6-217ENST00000575338 G3V318 75 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 CHEK1O14757 476 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 IGHV3-23P01764 117 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 RNF224P0DH78 156 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 PF4V1P10720 104 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 RAB4AP20338 218 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 FOXA3P55318 350 aaPredicted RBP5.28□□□□□ -1.56
SMG6-217ENST00000575338 TCL1AP56279 114 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 SCGB2A2Q13296 93 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 LY6EQ16553 131 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 IQCJQ1A5X6 159 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 Q5PR19 223 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 MRPL54Q6P161 138 aaKnown RBP5.28□□□□□ -1.56
SMG6-217ENST00000575338 TMEM136Q6ZRR5 245 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 NUP35Q8NFH5 326 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 OR2D3Q8NGH3 330 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 CCDC140Q96MF4 163 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 MS4A10Q96PG2 267 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 NEU1Q99519 415 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 HIST1H2BLQ99880 126 aa5.28□□□□□ -1.56
SMG6-217ENST00000575338 ASH1LQ9NR48 2969 aaKnown RBP5.28□□□□□ -1.56
SMG6-217ENST00000575338 A0A1B0GUT8 65 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 A1L4Q6 167 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 TSTD3H0UI37 97 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 H3BTX0 84 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 K7EMT4 169 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 IGLV1-40P01703 118 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 IGLV2-11P01706 119 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 SNRPCP09234 159 aaKnown RBP5.27□□□□□ -1.57
SMG6-217ENST00000575338 CR1P17927 2039 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 PPIFP30405 207 aaKnown RBP5.27□□□□□ -1.57
SMG6-217ENST00000575338 JOSD1Q15040 202 aaPredicted RBP5.27□□□□□ -1.57
SMG6-217ENST00000575338 FAM106AQ4KMX7 169 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 PDZD11Q5EBL8 140 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 TMEM78Q5T7P6 136 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 ASCL2Q99929 193 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 SAMD10Q9BYL1 202 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 NPFFR1Q9GZQ6 430 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 VPREB3Q9UKI3 123 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 LENEPQ9Y5L5 61 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 U3KQE9 123 aa5.27□□□□□ -1.57
SMG6-217ENST00000575338 SETXQ7Z333 2677 aaKnown RBP5.27□□□□□ -1.57
SMG6-217ENST00000575338 PRRC2AP48634 2157 aaKnown RBP5.26□□□□□ -1.57
SMG6-217ENST00000575338 A0A096LNT2 108 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 A0A1B0GXF2 115 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 TMEM189A5PLL7 270 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 FABP5P3A8MUU1 101 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 A8MWP6 167 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 HAX1O00165 279 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 AMBPP02760 352 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 ELANEP08246 267 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 FOXE3Q13461 319 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 LCN12Q6JVE5 192 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 C16orf54Q6UWD8 224 aa5.26□□□□□ -1.57
SMG6-217ENST00000575338 TMEM86BQ8N661 226 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms