RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 CD69Q07108 199 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 PSG5Q15238 335 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 ZNF114Q8NC26 417 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 OR10AG1Q8NH19 301 aa12.74□□□□□ -0.37
USP43-204ENST00000573955 MRPL16Q9NX20 251 aaKnown RBP12.74□□□□□ -0.37
USP43-204ENST00000573955 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
USP43-204ENST00000573955 IGHV3-21A0A0B4J1V1 117 aa12.73□□□□□ -0.37
USP43-204ENST00000573955 CNIH1O95406 144 aa12.73□□□□□ -0.37
USP43-204ENST00000573955 AREGP15514 252 aa12.73□□□□□ -0.37
USP43-204ENST00000573955 NBPF19A0A087WUL8 3843 aa12.73□□□□□ -0.37
USP43-204ENST00000573955 HLA-DRB1P01911 266 aa12.73□□□□□ -0.37
USP43-204ENST00000573955 SRIP30626 198 aa12.73□□□□□ -0.37
USP43-204ENST00000573955 PLGLAQ15195 96 aa12.73□□□□□ -0.37
USP43-204ENST00000573955 EBLN2Q6P2I7 272 aa12.73□□□□□ -0.37
USP43-204ENST00000573955 MIR17HGQ75NE6 70 aa12.73□□□□□ -0.37
USP43-204ENST00000573955 AMMECR1Q9Y4X0 333 aaPredicted RBP12.73□□□□□ -0.37
USP43-204ENST00000573955 TENM4Q6N022 2769 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 USP9YO00507 2555 aaPredicted RBP12.72□□□□□ -0.37
USP43-204ENST00000573955 TMEM189A5PLL7 270 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 OR4C46A6NHA9 309 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 H3BRM9 83 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 RBP4P02753 201 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 FRMD6-AS1P0C7T7 363 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 HTR1DP28221 377 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 GPR183P32249 361 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 PRR20EP86478 221 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 PRR20CP86479 221 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 PRR20DP86480 221 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 PRR20BP86481 221 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 PRR20AP86496 221 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 KCNIP2Q9NS61 270 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 SIGLEC9Q9Y336 463 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 A1L4Q6 167 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 NDUFB4O95168 129 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 CRYBB3P26998 211 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 MRPL36Q9P0J6 103 aaKnown RBP12.72□□□□□ -0.37
USP43-204ENST00000573955 SPCS1Q9Y6A9 102 aa12.72□□□□□ -0.37
USP43-204ENST00000573955 LY6LH3BQJ8 138 aa12.71□□□□□ -0.37
USP43-204ENST00000573955 GATA3P23771 443 aa12.71□□□□□ -0.37
USP43-204ENST00000573955 RPL27AP46776 148 aaKnown RBP12.71□□□□□ -0.37
USP43-204ENST00000573955 RUSC1-AS1Q66K80 236 aa12.71□□□□□ -0.37
USP43-204ENST00000573955 NPIPB3Q92617 1050 aa12.71□□□□□ -0.37
USP43-204ENST00000573955 TNFRSF18Q9Y5U5 241 aa12.71□□□□□ -0.37
USP43-204ENST00000573955 ABCA1O95477 2261 aa12.71□□□□□ -0.37
USP43-204ENST00000573955 M0R2Z0 102 aa12.71□□□□□ -0.38
USP43-204ENST00000573955 HSBP1O75506 76 aa12.71□□□□□ -0.38
USP43-204ENST00000573955 FA2HQ7L5A8 372 aa12.71□□□□□ -0.38
USP43-204ENST00000573955 SPATA12Q7Z6I5 190 aa12.71□□□□□ -0.38
USP43-204ENST00000573955 PPP1R27Q86WC6 154 aa12.71□□□□□ -0.38
USP43-204ENST00000573955 MMD2Q8IY49 270 aa12.71□□□□□ -0.38
USP43-204ENST00000573955 TEX45Q8NA69 505 aa12.71□□□□□ -0.38
USP43-204ENST00000573955 A0A0G2JLM5 398 aa12.7□□□□□ -0.38
USP43-204ENST00000573955 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.7□□□□□ -0.38
USP43-204ENST00000573955 CXorf1O96002 111 aa12.7□□□□□ -0.38
USP43-204ENST00000573955 ARL3P36405 182 aa12.7□□□□□ -0.38
USP43-204ENST00000573955 VMO1Q7Z5L0 202 aa12.7□□□□□ -0.38
USP43-204ENST00000573955 SLC17A3O00476 420 aa12.7□□□□□ -0.38
USP43-204ENST00000573955 HES1Q14469 280 aa12.7□□□□□ -0.38
USP43-204ENST00000573955 RPEL1Q2QD12 228 aa12.7□□□□□ -0.38
USP43-204ENST00000573955 NRGNQ92686 78 aa12.7□□□□□ -0.38
USP43-204ENST00000573955 NAA38Q9BRA0 125 aaKnown RBP12.7□□□□□ -0.38
USP43-204ENST00000573955 SPXQ9BT56 116 aa12.7□□□□□ -0.38
USP43-204ENST00000573955 BPESC1Q9GZL8 116 aa12.7□□□□□ -0.38
USP43-204ENST00000573955 DPM3Q9P2X0 92 aa12.7□□□□□ -0.38
USP43-204ENST00000573955 hDV102S1A0JD36 115 aa12.69□□□□□ -0.38
USP43-204ENST00000573955 A6NDN8 102 aa12.69□□□□□ -0.38
USP43-204ENST00000573955 CRYGBP07316 175 aa12.69□□□□□ -0.38
USP43-204ENST00000573955 GCHFRP30047 84 aa12.69□□□□□ -0.38
USP43-204ENST00000573955 EFNA4P52798 201 aa12.69□□□□□ -0.38
USP43-204ENST00000573955 SUB1P53999 127 aaKnown RBP eCLIP12.69□□□□□ -0.38
USP43-204ENST00000573955 MFAP2P55001 183 aa12.69□□□□□ -0.38
USP43-204ENST00000573955 BOD1L2Q8IYS8 172 aa12.69□□□□□ -0.38
USP43-204ENST00000573955 ZNF843Q8N446 348 aa12.69□□□□□ -0.38
USP43-204ENST00000573955 YTHDF2Q9Y5A9 579 aaKnown RBP12.69□□□□□ -0.38
USP43-204ENST00000573955 FNDC10F2Z333 226 aa12.69□□□□□ -0.38
USP43-204ENST00000573955 C19orf24Q9BVV8 132 aa12.69□□□□□ -0.38
USP43-204ENST00000573955 DOPEY2Q9Y3R5 2298 aa12.68□□□□□ -0.38
USP43-204ENST00000573955 HIST1H1EP10412 219 aaKnown RBP12.68□□□□□ -0.38
USP43-204ENST00000573955 PRTN3P24158 256 aa12.68□□□□□ -0.38
USP43-204ENST00000573955 ATP5IP56385 69 aaPredicted RBP12.68□□□□□ -0.38
USP43-204ENST00000573955 OR11H6Q8NGC7 330 aa12.68□□□□□ -0.38
USP43-204ENST00000573955 TMEM70Q9BUB7 260 aa12.68□□□□□ -0.38
USP43-204ENST00000573955 C2orf70A6NJV1 201 aa12.68□□□□□ -0.38
USP43-204ENST00000573955 M0R1W7 72 aa12.68□□□□□ -0.38
USP43-204ENST00000573955 TMEM97Q5BJF2 176 aa12.68□□□□□ -0.38
USP43-204ENST00000573955 SCRT2Q9NQ03 307 aa12.68□□□□□ -0.38
USP43-204ENST00000573955 ZANQ9Y493 2812 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 MOSP00540 346 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 COX19Q49B96 90 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 MORN5Q5VZ52 161 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 FOXI2Q6ZQN5 318 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 DYNAPQ8N1N2 210 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 ZNF418Q8TF45 676 aaPredicted RBP12.67□□□□□ -0.38
USP43-204ENST00000573955 SLC25A33Q9BSK2 321 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 SERTAD4Q9NUC0 356 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 SCO2A0A1W2PP80 73 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 INS-IGF2F8WCM5 200 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 BMPR1BO00238 502 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 ISLRO14498 428 aa12.67□□□□□ -0.38
USP43-204ENST00000573955 SIVA1O15304 175 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms