RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 C20orf173Q96LM9 149 aa16.34■□□□□ 0.21
RAB40B-207ENST00000572603 HRH4Q9H3N8 390 aa16.34■□□□□ 0.21
RAB40B-207ENST00000572603 RPRMQ9NS64 109 aa16.34■□□□□ 0.21
RAB40B-207ENST00000572603 ZNF586Q9NXT0 402 aa16.34■□□□□ 0.21
RAB40B-207ENST00000572603 PLA2G2EQ9NZK7 142 aa16.34■□□□□ 0.21
RAB40B-207ENST00000572603 H3BTX0 84 aa16.33■□□□□ 0.2
RAB40B-207ENST00000572603 MBP02144 154 aa16.33■□□□□ 0.2
RAB40B-207ENST00000572603 DEFB121Q5J5C9 76 aa16.33■□□□□ 0.2
RAB40B-207ENST00000572603 LCN15Q6UWW0 184 aa16.33■□□□□ 0.2
RAB40B-207ENST00000572603 C16orf92Q96LL3 132 aa16.33■□□□□ 0.2
RAB40B-207ENST00000572603 RBMY1BA6NDE4 496 aaKnown RBP16.32■□□□□ 0.2
RAB40B-207ENST00000572603 RBMY1EA6NEQ0 496 aaKnown RBP16.32■□□□□ 0.2
RAB40B-207ENST00000572603 RBMY1DP0C7P1 496 aaKnown RBP16.32■□□□□ 0.2
RAB40B-207ENST00000572603 CDC34P49427 236 aaPredicted RBP16.32■□□□□ 0.2
RAB40B-207ENST00000572603 SNRPD3P62318 126 aaKnown RBP16.32■□□□□ 0.2
RAB40B-207ENST00000572603 IGFL4Q6B9Z1 124 aa16.32■□□□□ 0.2
RAB40B-207ENST00000572603 SSX7Q7RTT5 188 aa16.32■□□□□ 0.2
RAB40B-207ENST00000572603 FXYD5Q96DB9 178 aa16.32■□□□□ 0.2
RAB40B-207ENST00000572603 SAT2Q96F10 170 aaPredicted RBP16.32■□□□□ 0.2
RAB40B-207ENST00000572603 ZNF331Q9NQX6 463 aaPredicted RBP16.32■□□□□ 0.2
RAB40B-207ENST00000572603 SEC11BP0C7V7 166 aa16.31■□□□□ 0.2
RAB40B-207ENST00000572603 HIST1H1EP10412 219 aaKnown RBP16.31■□□□□ 0.2
RAB40B-207ENST00000572603 TPT1P13693 172 aaKnown RBP16.31■□□□□ 0.2
RAB40B-207ENST00000572603 HLA-DMBP28068 263 aa16.31■□□□□ 0.2
RAB40B-207ENST00000572603 ID1P41134 155 aa16.31■□□□□ 0.2
RAB40B-207ENST00000572603 DEFB1P60022 68 aa16.31■□□□□ 0.2
RAB40B-207ENST00000572603 ZNF726P1Q15940 193 aa16.31■□□□□ 0.2
RAB40B-207ENST00000572603 KHDC3LQ587J8 217 aa16.31■□□□□ 0.2
RAB40B-207ENST00000572603 BAP18Q8IXM2 172 aa16.31■□□□□ 0.2
RAB40B-207ENST00000572603 PAXXQ9BUH6 204 aa16.31■□□□□ 0.2
RAB40B-207ENST00000572603 OR51M1Q9H341 326 aa16.31■□□□□ 0.2
RAB40B-207ENST00000572603 HUWE1Q7Z6Z7 4374 aaKnown RBP16.3■□□□□ 0.2
RAB40B-207ENST00000572603 TRBV19A0A075B6N1 114 aa16.3■□□□□ 0.2
RAB40B-207ENST00000572603 OR7C2O60412 319 aa16.3■□□□□ 0.2
RAB40B-207ENST00000572603 NDUFB4O95168 129 aa16.3■□□□□ 0.2
RAB40B-207ENST00000572603 TAS2R45P59539 299 aa16.3■□□□□ 0.2
RAB40B-207ENST00000572603 EIF5AP63241 154 aaKnown RBP16.3■□□□□ 0.2
RAB40B-207ENST00000572603 GUK1Q16774 197 aa16.3■□□□□ 0.2
RAB40B-207ENST00000572603 RNF182Q8N6D2 247 aa16.3■□□□□ 0.2
RAB40B-207ENST00000572603 RAB24Q969Q5 203 aa16.3■□□□□ 0.2
RAB40B-207ENST00000572603 SLC50A1Q9BRV3 221 aa16.3■□□□□ 0.2
RAB40B-207ENST00000572603 TUBA4BQ9H853 241 aa16.3■□□□□ 0.2
RAB40B-207ENST00000572603 A0A1W2PPV4 95 aa16.29■□□□□ 0.2
RAB40B-207ENST00000572603 KNCNA6PVL3 124 aa16.29■□□□□ 0.2
RAB40B-207ENST00000572603 ZNF253O75346 499 aa16.29■□□□□ 0.2
RAB40B-207ENST00000572603 OR10J4P0C629 311 aa16.29■□□□□ 0.2
RAB40B-207ENST00000572603 STAG3L2P0CL84 134 aa16.29■□□□□ 0.2
RAB40B-207ENST00000572603 STAG3L3P0CL85 134 aa16.29■□□□□ 0.2
RAB40B-207ENST00000572603 AKR1C8PQ5T2L2 129 aa16.29■□□□□ 0.2
RAB40B-207ENST00000572603 LINC00052Q96N35 136 aa16.29■□□□□ 0.2
RAB40B-207ENST00000572603 HMGB3O15347 200 aaKnown RBP16.28■□□□□ 0.2
RAB40B-207ENST00000572603 UBE2L3P68036 154 aaKnown RBP16.28■□□□□ 0.2
RAB40B-207ENST00000572603 SLC51BQ86UW2 128 aa16.28■□□□□ 0.2
RAB40B-207ENST00000572603 RNF141Q8WVD5 230 aa16.28■□□□□ 0.2
RAB40B-207ENST00000572603 TMED6Q8WW62 240 aa16.28■□□□□ 0.2
RAB40B-207ENST00000572603 B9D2Q9BPU9 175 aa16.28■□□□□ 0.2
RAB40B-207ENST00000572603 PDE6HQ13956 83 aa16.27■□□□□ 0.2
RAB40B-207ENST00000572603 GDF5OSQ5U4N7 250 aa16.27■□□□□ 0.2
RAB40B-207ENST00000572603 PQLC2Q6ZP29 291 aa16.27■□□□□ 0.2
RAB40B-207ENST00000572603 PHYHIPLQ96FC7 376 aa16.27■□□□□ 0.2
RAB40B-207ENST00000572603 ACTR3CQ9C0K3 210 aaPredicted RBP16.27■□□□□ 0.2
RAB40B-207ENST00000572603 COL7A1Q02388 2944 aa16.27■□□□□ 0.19
RAB40B-207ENST00000572603 CTXND1A0A1B0GTU2 59 aa16.26■□□□□ 0.19
RAB40B-207ENST00000572603 NBEAP1P0C6P0 100 aa16.26■□□□□ 0.19
RAB40B-207ENST00000572603 ARL14EPLP0DKL9 152 aa16.26■□□□□ 0.19
RAB40B-207ENST00000572603 TRPT1Q86TN4 253 aaKnown RBP16.26■□□□□ 0.19
RAB40B-207ENST00000572603 LOC102724200A0A096LPH7 203 aaPredicted RBP16.25■□□□□ 0.19
RAB40B-207ENST00000572603 F6UB75 175 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 HLA-DRB4P13762 266 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 FHITP49789 147 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 PSG3Q16557 428 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 ACTL10Q5JWF8 245 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 FOXI2Q6ZQN5 318 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 SBSPONQ8IVN8 264 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 LRRC20Q8TCA0 184 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 BLNKQ8WV28 456 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 SAV1Q9H4B6 383 aaPredicted RBP16.25■□□□□ 0.19
RAB40B-207ENST00000572603 BOLA1Q9Y3E2 137 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 HLA-DRB4X5D2U9 266 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 TENM3Q9P273 2699 aa16.25■□□□□ 0.19
RAB40B-207ENST00000572603 BOLA2-SMG1P6H3BVE0 249 aa16.24■□□□□ 0.19
RAB40B-207ENST00000572603 RPL35AP18077 110 aaKnown RBP16.24■□□□□ 0.19
RAB40B-207ENST00000572603 HAGHQ16775 308 aa16.24■□□□□ 0.19
RAB40B-207ENST00000572603 A0A0J9YX75 114 aa16.23■□□□□ 0.19
RAB40B-207ENST00000572603 UMAD1C9J7I0 102 aa16.23■□□□□ 0.19
RAB40B-207ENST00000572603 H3BMM0 161 aa16.23■□□□□ 0.19
RAB40B-207ENST00000572603 C4BPBP20851 252 aa16.23■□□□□ 0.19
RAB40B-207ENST00000572603 ZNF738Q8NE65 137 aa16.23■□□□□ 0.19
RAB40B-207ENST00000572603 SUN5Q8TC36 379 aa16.23■□□□□ 0.19
RAB40B-207ENST00000572603 ASCL2Q99929 193 aa16.23■□□□□ 0.19
RAB40B-207ENST00000572603 PRB4P10163 310 aaPredicted RBP16.22■□□□□ 0.19
RAB40B-207ENST00000572603 GCHFRP30047 84 aa16.22■□□□□ 0.19
RAB40B-207ENST00000572603 STHQ8IWL8 128 aa16.22■□□□□ 0.19
RAB40B-207ENST00000572603 EXOC3-AS1Q8N2X6 119 aa16.22■□□□□ 0.19
RAB40B-207ENST00000572603 TGP01266 2768 aa16.21■□□□□ 0.19
RAB40B-207ENST00000572603 A8MTW9 85 aa16.21■□□□□ 0.19
RAB40B-207ENST00000572603 ZNF705FA8MVS1 300 aaPredicted RBP16.21■□□□□ 0.19
RAB40B-207ENST00000572603 M0R3E3 92 aa16.21■□□□□ 0.19
RAB40B-207ENST00000572603 CXorf1O96002 111 aa16.21■□□□□ 0.19
RAB40B-207ENST00000572603 PSG9Q00887 426 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms