RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 FAM104BQ5XKR9 115 aa12.25□□□□□ -0.45
SMG6-207ENST00000570756 PCP2Q8IVA1 136 aa12.25□□□□□ -0.45
SMG6-207ENST00000570756 PSG8Q9UQ74 426 aa12.25□□□□□ -0.45
SMG6-207ENST00000570756 IGHV1-46P01743 117 aa12.24□□□□□ -0.45
SMG6-207ENST00000570756 PIFOQ8TCI5 191 aa12.24□□□□□ -0.45
SMG6-207ENST00000570756 SIGMAR1Q99720 223 aa12.24□□□□□ -0.45
SMG6-207ENST00000570756 INTS1Q8N201 2190 aaKnown RBP12.24□□□□□ -0.45
SMG6-207ENST00000570756 PPIAL4CA0A0B4J2A2 164 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 TEX48A0A1B0GUV7 120 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 PPIAL4GP0DN37 164 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 PSG3Q16557 428 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 TPSG1Q9NRR2 321 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 HIGD1BQ9P298 99 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 CHD8Q9HCK8 2581 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 J3QR89 54 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 CCL3L1P16619 93 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 RPL27AP46776 148 aaKnown RBP12.23□□□□□ -0.45
SMG6-207ENST00000570756 LYPD1Q8N2G4 141 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 LINC00311Q8N616 119 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 C8orf31Q8N9H6 132 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 SCNM1Q9BWG6 230 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 F11RQ9Y624 299 aaKnown RBP12.23□□□□□ -0.45
SMG6-207ENST00000570756 ZZEF1O43149 2961 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 BOD1L1Q8NFC6 3051 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 NCOR2Q9Y618 2525 aa12.23□□□□□ -0.45
SMG6-207ENST00000570756 IGHV3-21A0A0B4J1V1 117 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 FTH1P19P0C7X4 201 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 GCSHP23434 173 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 PRSS57Q6UWY2 283 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 Q71RC1 249 aaPredicted RBP12.22□□□□□ -0.45
SMG6-207ENST00000570756 NGBQ9NPG2 151 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 MGAQ8IWI9 3026 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 ARFGEF3Q5TH69 2177 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 CADP27708 2225 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 TRBV19A0A075B6N1 114 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 AZU1P20160 251 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 ATP1A1-AS1Q5TC04 95 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 AMN1Q8IY45 258 aa12.22□□□□□ -0.45
SMG6-207ENST00000570756 FBLL1A6NHQ2 334 aaKnown RBP12.21□□□□□ -0.45
SMG6-207ENST00000570756 SHISA9B4DS77 424 aa12.21□□□□□ -0.45
SMG6-207ENST00000570756 PAX8Q06710 450 aa12.21□□□□□ -0.45
SMG6-207ENST00000570756 DIAPH2-AS1Q14236 149 aa12.21□□□□□ -0.45
SMG6-207ENST00000570756 C3orf36Q3SXR2 165 aa12.21□□□□□ -0.45
SMG6-207ENST00000570756 BCL6BQ8N143 479 aaPredicted RBP12.21□□□□□ -0.45
SMG6-207ENST00000570756 VGLL1Q99990 258 aa12.21□□□□□ -0.45
SMG6-207ENST00000570756 PRRC2CQ9Y520 2896 aaKnown RBP12.21□□□□□ -0.45
SMG6-207ENST00000570756 NDUFS7O75251 213 aa12.21□□□□□ -0.46
SMG6-207ENST00000570756 LYZL1Q6UWQ5 148 aa12.21□□□□□ -0.46
SMG6-207ENST00000570756 RASL11BQ9BPW5 248 aa12.21□□□□□ -0.46
SMG6-207ENST00000570756 A0A1B0GV72 72 aa12.2□□□□□ -0.46
SMG6-207ENST00000570756 NKX2-8O15522 239 aa12.2□□□□□ -0.46
SMG6-207ENST00000570756 ENSAO43768 121 aaKnown RBP12.2□□□□□ -0.46
SMG6-207ENST00000570756 FCGR2BP31994 310 aaPredicted RBP12.2□□□□□ -0.46
SMG6-207ENST00000570756 CRIP1P50238 77 aa12.2□□□□□ -0.46
SMG6-207ENST00000570756 MRGPRG-AS1Q2M3A8 158 aa12.2□□□□□ -0.46
SMG6-207ENST00000570756 TM4SF20Q53R12 229 aa12.2□□□□□ -0.46
SMG6-207ENST00000570756 TMEM200BQ69YZ2 307 aa12.2□□□□□ -0.46
SMG6-207ENST00000570756 CKS2P33552 79 aa12.2□□□□□ -0.46
SMG6-207ENST00000570756 MRPL51Q4U2R6 128 aaKnown RBP12.2□□□□□ -0.46
SMG6-207ENST00000570756 GTSF1LQ9H1H1 148 aa12.2□□□□□ -0.46
SMG6-207ENST00000570756 TMEM213A2RRL7 107 aa12.19□□□□□ -0.46
SMG6-207ENST00000570756 FXYD2P54710 66 aa12.19□□□□□ -0.46
SMG6-207ENST00000570756 CD300EQ496F6 205 aaPredicted RBP12.19□□□□□ -0.46
SMG6-207ENST00000570756 SIGLEC15Q6ZMC9 328 aa12.19□□□□□ -0.46
SMG6-207ENST00000570756 DKK2Q9UBU2 259 aa12.19□□□□□ -0.46
SMG6-207ENST00000570756 PLXNB1O43157 2135 aa12.19□□□□□ -0.46
SMG6-207ENST00000570756 IGF2RP11717 2491 aa12.19□□□□□ -0.46
SMG6-207ENST00000570756 F8W1H4 67 aa12.19□□□□□ -0.46
SMG6-207ENST00000570756 FXYD7P58549 80 aa12.19□□□□□ -0.46
SMG6-207ENST00000570756 SHANK2-AS3Q9BTD1 123 aa12.19□□□□□ -0.46
SMG6-207ENST00000570756 CHAC1Q9BUX1 264 aa12.19□□□□□ -0.46
SMG6-207ENST00000570756 SMPXQ9UHP9 88 aa12.19□□□□□ -0.46
SMG6-207ENST00000570756 K7EM74 188 aa12.18□□□□□ -0.46
SMG6-207ENST00000570756 THBDP07204 575 aa12.18□□□□□ -0.46
SMG6-207ENST00000570756 APELAP0DMC3 54 aa12.18□□□□□ -0.46
SMG6-207ENST00000570756 BMI1P35226 326 aa12.18□□□□□ -0.46
SMG6-207ENST00000570756 ZNF207O43670 478 aaKnown RBP12.18□□□□□ -0.46
SMG6-207ENST00000570756 RBP4P02753 201 aa12.18□□□□□ -0.46
SMG6-207ENST00000570756 SMAGPQ0VAQ4 97 aa12.18□□□□□ -0.46
SMG6-207ENST00000570756 RITA1Q96K30 269 aa12.18□□□□□ -0.46
SMG6-207ENST00000570756 TMEM133Q9H2Q1 129 aa12.18□□□□□ -0.46
SMG6-207ENST00000570756 GAGE12HA6NDE8 117 aa12.17□□□□□ -0.46
SMG6-207ENST00000570756 PLGLAQ15195 96 aa12.17□□□□□ -0.46
SMG6-207ENST00000570756 LINC01559Q495D7 138 aa12.17□□□□□ -0.46
SMG6-207ENST00000570756 ASCL2Q99929 193 aa12.17□□□□□ -0.46
SMG6-207ENST00000570756 DSPP15924 2871 aaKnown RBP12.17□□□□□ -0.46
SMG6-207ENST00000570756 NPYP01303 97 aa12.17□□□□□ -0.46
SMG6-207ENST00000570756 FOXI2Q6ZQN5 318 aa12.17□□□□□ -0.46
SMG6-207ENST00000570756 ATMQ13315 3056 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 ICE1Q9Y2F5 2266 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 TMSB15BA0A087X1C1 80 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 WI2-2373I1.2A0A1W2PRP0 233 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 H3BRN7 92 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 C17orf77Q96MU5 243 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 C8orf49Q96NF6 230 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 TM2D2Q9BX73 214 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 MAP1LC3AQ9H492 121 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 ZMAT4Q9H898 229 aa12.16□□□□□ -0.46
SMG6-207ENST00000570756 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
SMG6-207ENST00000570756 GOSR1O95249 250 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms