RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SIGLEC8Q9NYZ4 499 aa11.65□□□□□ -0.54
HERPUD1-219ENST00000570273 YTHDF2Q9Y5A9 579 aaKnown RBP11.65□□□□□ -0.54
HERPUD1-219ENST00000570273 LOC102723971A0A1B0GUV8 181 aa11.64□□□□□ -0.55
HERPUD1-219ENST00000570273 LINC00862A6NCI5 91 aa11.64□□□□□ -0.55
HERPUD1-219ENST00000570273 SLC17A3O00476 420 aa11.64□□□□□ -0.55
HERPUD1-219ENST00000570273 CD5P06127 495 aa11.64□□□□□ -0.55
HERPUD1-219ENST00000570273 COMMD7Q86VX2 200 aa11.64□□□□□ -0.55
HERPUD1-219ENST00000570273 FAM210AQ96ND0 272 aa11.64□□□□□ -0.55
HERPUD1-219ENST00000570273 RBFOX3A6NFN3 312 aa11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 FAM74A7A6NL05 159 aa11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 CD33P20138 364 aa11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 PMS2P11Q13670 270 aa11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 PDE6HQ13956 83 aa11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 DEFB114Q30KQ6 69 aa11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 CST9LP1Q5W188 147 aa11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 FAM90A2PQ658T7 463 aa11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 RBPMS2Q6ZRY4 209 aaKnown RBP11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 EIF5A2Q9GZV4 153 aaKnown RBP11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 NRN1Q9NPD7 142 aa11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 MED9Q9NWA0 146 aa11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 ARL2-SNX15V9GYD0 113 aa11.63□□□□□ -0.55
HERPUD1-219ENST00000570273 A0A1W2PRE2 83 aa11.62□□□□□ -0.55
HERPUD1-219ENST00000570273 NDUFB4O95168 129 aa11.62□□□□□ -0.55
HERPUD1-219ENST00000570273 TAGLN2P37802 199 aaKnown RBP11.62□□□□□ -0.55
HERPUD1-219ENST00000570273 RANP62826 216 aaKnown RBP11.62□□□□□ -0.55
HERPUD1-219ENST00000570273 CD300EQ496F6 205 aaPredicted RBP11.62□□□□□ -0.55
HERPUD1-219ENST00000570273 ZNF506Q5JVG8 444 aa11.62□□□□□ -0.55
HERPUD1-219ENST00000570273 GBGT1Q8N5D6 347 aa11.62□□□□□ -0.55
HERPUD1-219ENST00000570273 SLC50A1Q9BRV3 221 aa11.62□□□□□ -0.55
HERPUD1-219ENST00000570273 Q9H3A6 140 aa11.62□□□□□ -0.55
HERPUD1-219ENST00000570273 C11orf94C9JXX5 98 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 DNASE2O00115 360 aaPredicted RBP11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 ZNF253O75346 499 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 ATP5G3P48201 142 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 TFPI2P48307 235 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 PSG9Q00887 426 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 ICAM4Q14773 271 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 WFDC3Q8IUB2 231 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 TMEM61Q8N0U2 210 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 RXFP4Q8TDU9 374 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 C16orf92Q96LL3 132 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 RARRES2Q99969 163 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 MS4A6AQ9H2W1 248 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 AAMDCQ9H7C9 122 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 OTORQ9NRC9 128 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 VAX2Q9UIW0 290 aa11.61□□□□□ -0.55
HERPUD1-219ENST00000570273 RAB19A4D1S5 217 aa11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 GGTLC3B5MD39 225 aa11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 PAFAH1B2P68402 229 aa11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 C9orf66Q5T8R8 295 aa11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 SAMD13Q5VXD3 122 aa11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 EXOC3-AS1Q8N2X6 119 aa11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 MCRIP2Q9BUT9 160 aaKnown RBP11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 ZNF331Q9NQX6 463 aaPredicted RBP11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 TRAV25A0A0B4J276 109 aa11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 SOCS3O14543 225 aa11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 TSPAN4O14817 238 aa11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 SLC25A5P05141 298 aaKnown RBP11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 SUMO1P63165 101 aaKnown RBP11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 MEF2BQ02080 365 aaPredicted RBP11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 IGFL4Q6B9Z1 124 aa11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 LYPD1Q8N2G4 141 aa11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 NKX6-2Q9C056 277 aaPredicted RBP11.6□□□□□ -0.55
HERPUD1-219ENST00000570273 TRAV8-2A0A0B4J237 113 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 PGPA6NDG6 321 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 IGLV1-51P01701 117 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 ID1P41134 155 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 SRSF3P84103 164 aaKnown RBP11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 PEA15Q15121 130 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 GUCA2BQ16661 112 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 NDUFA5Q16718 116 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 WFDC9Q8NEX5 89 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 OR2K2Q8NGT1 345 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 CMTM2Q8TAZ6 248 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 DCANP1Q8TF63 244 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 TXNDC17Q9BRA2 123 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 TREM1Q9NP99 234 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 RPH3ALQ9UNE2 315 aa11.59□□□□□ -0.55
HERPUD1-219ENST00000570273 IZUMO1RA6ND01 250 aa11.58□□□□□ -0.56
HERPUD1-219ENST00000570273 K7EQG2 157 aa11.58□□□□□ -0.56
HERPUD1-219ENST00000570273 ISLRO14498 428 aa11.58□□□□□ -0.56
HERPUD1-219ENST00000570273 HLA-DMBP28068 263 aa11.58□□□□□ -0.56
HERPUD1-219ENST00000570273 INSL3P51460 131 aa11.58□□□□□ -0.56
HERPUD1-219ENST00000570273 CD81P60033 236 aa11.58□□□□□ -0.56
HERPUD1-219ENST00000570273 LCN12Q6JVE5 192 aa11.58□□□□□ -0.56
HERPUD1-219ENST00000570273 RNF182Q8N6D2 247 aa11.58□□□□□ -0.56
HERPUD1-219ENST00000570273 C5orf17Q8NAS9 161 aa11.58□□□□□ -0.56
HERPUD1-219ENST00000570273 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
HERPUD1-219ENST00000570273 TRAV2A0A0B4J234 112 aa11.57□□□□□ -0.56
HERPUD1-219ENST00000570273 OR4C46A6NHA9 309 aa11.57□□□□□ -0.56
HERPUD1-219ENST00000570273 F6UZH7 168 aa11.57□□□□□ -0.56
HERPUD1-219ENST00000570273 IGLL1P15814 213 aa11.57□□□□□ -0.56
HERPUD1-219ENST00000570273 GNG5P63218 68 aa11.57□□□□□ -0.56
HERPUD1-219ENST00000570273 CLEC5AQ9NY25 188 aa11.57□□□□□ -0.56
HERPUD1-219ENST00000570273 SCO2A0A1W2PP80 73 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 M0R3E3 92 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 PDE6DO43924 150 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 CSN1S1P47710 185 aa11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 SNRPD3P62318 126 aaKnown RBP11.56□□□□□ -0.56
HERPUD1-219ENST00000570273 PSG3Q16557 428 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms