RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	IGHV3-53	P01767	116 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	CD2	P06729	351 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	HIST1H2BJ	P06899	126 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	GPX1	P07203	203 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	TSPAN19	P0C672	248 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	METTL15P1	P0C7V9	234 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	FGF7	P21781	194 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	RPL22	P35268	128 aa	Known RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	AQP4	P55087	323 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	NDUFA6	P56556	154 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	HIST1H4A	P62805	103 aa	Known RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	MYL5	Q02045	173 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	ZNF117	Q03924	483 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	AKR1C1	Q04828	323 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	MIA	Q16674	131 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	RNASE10	Q5GAN6	216 aa	Known RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	MEIG1	Q5JSS6	88 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	CLLU1	Q5K131	121 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	NCMAP	Q5T1S8	102 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	EIF5AL1	Q6IS14	154 aa	Known RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	C22orf39	Q6P5X5	142 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	HAGHL	Q6PII5	290 aa	Predicted RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	LCN15	Q6UWW0	184 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	PATE2	Q6UY27	113 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	C7orf65	Q6ZTY9	151 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	PHF5A	Q7RTV0	110 aa	Known RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243		Q8NAQ8	132 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	MORN4	Q8NDC4	146 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	OR10P1	Q8NGE3	313 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	OR5D14	Q8NGL3	314 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	PFN4	Q8NHR9	129 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	TMEM106A	Q96A25	262 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	SDF2	Q99470	211 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	RETNLB	Q9BQ08	111 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	CST9L	Q9H4G1	147 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	RNF122	Q9H9V4	155 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	SOX21	Q9Y651	276 aa	Predicted RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	FOCAD	Q5VW36	1801 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	VIRMA	Q69YN4	1812 aa	Known RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	DISP2	A7MBM2	1401 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	SMG6	Q86US8	1419 aa	Known RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	TRAPPC8	Q9Y2L5	1435 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	WDR90	Q96KV7	1748 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	MYO5A	Q9Y4I1	1855 aa	Known RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	TCOF1	Q13428	1488 aa	Known RBP	0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	RIMBP3C	A6NJZ7	1639 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	RIMBP3B	A6NNM3	1639 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	RIMBP3	Q9UFD9	1639 aa		0.86	□□□□□ -2.27
UBR1-209	ENST00000569243	ADGB	Q8N7X0	1667 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	TRAV7	A0A075B6U4	112 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	TRAV27	A0A087WT01	109 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	IGKV2D-26	A0A0A0MRZ7	120 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	TRAV1-1	A0A0B4J248	108 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243		A0A0G2JMM0	328 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	TRBV27	A0A0K0K1C4	114 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243		A0A1B0GW54	56 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243		A0A1W2PPB8	328 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	GRIFIN	A4D1Z8	144 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	OR2T8	A6NH00	312 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	ZNF727	A8MUV8	499 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	KIR3DP1	A8MWS1	328 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243		A8MWV9	139 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	CORT	O00230	105 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	OR1I1	O60431	355 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	HBD	P02042	147 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	CLPS	P04118	112 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	MSMB	P08118	114 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	CTSG	P08311	255 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	CD14	P08571	375 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	TRGC1	P0CF51	173 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	AKAIN1	P0CW23	69 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	GZMB	P10144	247 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	PRB4	P10163	310 aa	Predicted RBP	0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	MGST1	P10620	155 aa	Known RBP	0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	HLA-E	P13747	358 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	HIST1H1D	P16402	221 aa	Known RBP	0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	GUCA1A	P43080	201 aa	Predicted RBP	0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	KLRD1	Q13241	179 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	CDK5R1	Q15078	307 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	SS18	Q15532	418 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	ARHGAP31	Q2M1Z3	1444 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	DPPA3	Q6W0C5	159 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243		Q6ZQT7	251 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	C3orf62	Q6ZUJ4	267 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243		Q8IYB0	196 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	NALCN	Q8IZF0	1738 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	C10orf126	Q8N4M7	172 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	LINC00311	Q8N616	119 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	TCTEX1D1	Q8N7M0	179 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	ANKRD31	Q8N7Z5	1873 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	OR4S1	Q8NGB4	309 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	OR5A2	Q8NGI9	324 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	NAT14	Q8WUY8	206 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	CLEC2B	Q92478	149 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	CHCHD1	Q96BP2	118 aa	Known RBP	0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	CIB3	Q96Q77	187 aa	Predicted RBP	0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	YPEL2	Q96QA6	119 aa		0.85	□□□□□ -2.27
UBR1-209	ENST00000569243	OR8B2	Q96RD0	313 aa		0.85	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms