RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PMS2P5A8MQ11 134 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 F6UB75 175 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 PRR30Q53SZ7 412 aaPredicted RBP5.76□□□□□ -1.49
CNOT1-216ENST00000569240 SIPA1L1O43166 1804 aa5.76□□□□□ -1.49
CNOT1-216ENST00000569240 INS-IGF2F8WCM5 200 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 CD7P09564 240 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 LINC00158P58513 81 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 LINC00311Q8N616 119 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 C8orf31Q8N9H6 132 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 GATD1Q8NB37 220 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 SBF2Q86WG5 1849 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 CCL8P80075 99 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 PRIMA1Q86XR5 153 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 ADARB2-AS1A8MUL3 147 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 COL9A2Q14055 689 aaPredicted RBP5.75□□□□□ -1.49
CNOT1-216ENST00000569240 RNF183Q96D59 192 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 NDUFA12Q9UI09 145 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 BTAF1O14981 1849 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 IMMP1LQ96LU5 166 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 KIAA1217Q5T5P2 1943 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 WFDC2Q14508 124 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 PMS2CLQ68D20 193 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 FLVCR1-AS1Q8TAF5 88 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 I3L3M4 83 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 PAX4O43316 350 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 SIGLEC15Q6ZMC9 328 aa5.75□□□□□ -1.49
CNOT1-216ENST00000569240 MED14OSP0DP75 135 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 HERVK_113P63121 156 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 CR1LQ2VPA4 569 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 C3orf36Q3SXR2 165 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 C2orf70A6NJV1 201 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 RNASE4P34096 147 aaKnown RBP5.74□□□□□ -1.49
CNOT1-216ENST00000569240 DEFB109BQ30KR1 87 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 DUX3Q96PT4 197 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 NDUFA4L2Q9NRX3 87 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 FAM240AA0A1B0GVK7 77 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 SH2D6Q7Z4S9 175 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 ZNRF1Q8ND25 227 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 PRR25Q96S07 402 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 LOC285556D6RIA3 1793 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 A0A1B0GX51 115 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 TRGV3P03979 118 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 CECR9P0C854 216 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 ZNF114Q8NC26 417 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 CFHR2P36980 270 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 ZNF876PQ49A33 203 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 USMG5Q96IX5 58 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 PIKFYVEQ9Y2I7 2098 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 NYNRINQ9P2P1 1898 aaKnown RBP5.74□□□□□ -1.49
CNOT1-216ENST00000569240 MYO16Q9Y6X6 1858 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 NDUFC2-KCTD14E9PQ53 114 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 AMTNQ6UX39 209 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 DUX5Q96PT3 197 aa5.74□□□□□ -1.49
CNOT1-216ENST00000569240 TGFBR3LH3BV60 316 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 TP53TG1Q9Y2A0 90 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 IGHV3-72A0A0B4J1Y9 119 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 K7EN84 100 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 CD59P13987 128 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 LYPD6Q86Y78 171 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 CYYR1Q96J86 154 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 ORMDL1Q9P0S3 153 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 FAM223BA6NKX1 122 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 FAM223AQ8IWN6 122 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 A0A087WV48 116 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 C17orf100A8MU93 164 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 P0DMU3 169 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 FAM231AP0DMU4 169 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 FAM231CP0DMU5 169 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 ERCC8Q13216 396 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 TIMM17AQ99595 171 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 TOMM7Q9P0U1 55 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 H3BRN7 92 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 NDUFA7O95182 113 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 FXYD5Q96DB9 178 aa5.73□□□□□ -1.49
CNOT1-216ENST00000569240 CGB1A6NKQ9 187 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 BAALC-AS2P0C853 105 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 LINC00473A8K010 186 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 EXOC3-AS1Q8N2X6 119 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 PDCD11Q14690 1871 aaKnown RBP5.72□□□□□ -1.49
CNOT1-216ENST00000569240 CENPVL3A0A0U1RRI6 287 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 TMEM213A2RRL7 107 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 F8WEM9 126 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 DUX4L9Q6RFH8 374 aaPredicted RBP5.72□□□□□ -1.49
CNOT1-216ENST00000569240 C11orf44Q8N8P7 122 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 IGF2BP2-AS1Q96M15 143 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 DSCR8Q96T75 97 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 C11orf1Q9H5F2 150 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 IGKV1-6A0A0C4DH72 117 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 A0A0J9YXY3 114 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 PSMB8P28062 276 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 PAX8Q06710 450 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 TDRG1Q3Y452 100 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 IGKV1-39P01597 117 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 IGKV1D-39P04432 117 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 KIF26BQ2KJY2 2108 aa5.72□□□□□ -1.49
CNOT1-216ENST00000569240 C11orf86A6NJI1 115 aa5.71□□□□□ -1.49
CNOT1-216ENST00000569240 K7ERJ3 54 aa5.71□□□□□ -1.49
CNOT1-216ENST00000569240 FXYD2P54710 66 aa5.71□□□□□ -1.49
CNOT1-216ENST00000569240 URB1O60287 2271 aaKnown RBP5.71□□□□□ -1.49
CNOT1-216ENST00000569240 SDHAF1A6NFY7 115 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms