RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 FAM213BQ8TBF2 198 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 GPR61Q9BZJ8 451 aa7.87□□□□□ -1.15
CDH3-210ENST00000569117 A0A087X0K7 114 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 TRAV5A0A0B4J249 113 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 TRAV25A0A0B4J276 109 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 MAP1LC3B2A6NCE7 125 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 OR7C2O60412 319 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 IFNA7P01567 189 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 ARL14EPLP0DKL9 152 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 IGLC2P0DOY2 106 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 GALR1P47211 349 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 MEOX2P50222 304 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 PQLC2Q6ZP29 291 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 TCF24Q7RTU0 167 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 TMEM61Q8N0U2 210 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 ZNF503Q96F45 646 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 MAP1LC3BQ9GZQ8 125 aa7.86□□□□□ -1.15
CDH3-210ENST00000569117 PKD1L1Q8TDX9 2849 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 TSPAN4O14817 238 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 HMGB3O15347 200 aaKnown RBP7.85□□□□□ -1.15
CDH3-210ENST00000569117 EIF3GO75821 320 aaKnown RBP eCLIP7.85□□□□□ -1.15
CDH3-210ENST00000569117 PYYP10082 97 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 IGLL1P15814 213 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 UBE2L3P68036 154 aaKnown RBP7.85□□□□□ -1.15
CDH3-210ENST00000569117 CD300EQ496F6 205 aaPredicted RBP7.85□□□□□ -1.15
CDH3-210ENST00000569117 LCN12Q6JVE5 192 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 LRRC20Q8TCA0 184 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 MBD3L1Q8WWY6 194 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 SPAG8Q99932 426 aaPredicted RBP7.85□□□□□ -1.15
CDH3-210ENST00000569117 PAXXQ9BUH6 204 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 OR51M1Q9H341 326 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 HRH4Q9H3N8 390 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 NRN1Q9NPD7 142 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 UBQLN2Q9UHD9 624 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 SMAD5-AS1Q9Y6J3 95 aa7.85□□□□□ -1.15
CDH3-210ENST00000569117 TRAV2A0A0B4J234 112 aa7.84□□□□□ -1.15
CDH3-210ENST00000569117 TRAV1-1A0A0B4J248 108 aa7.84□□□□□ -1.15
CDH3-210ENST00000569117 ZNF705EA8MWA4 302 aaPredicted RBP7.84□□□□□ -1.15
CDH3-210ENST00000569117 CXorf1O96002 111 aa7.84□□□□□ -1.15
CDH3-210ENST00000569117 HIST1H1EP10412 219 aaKnown RBP7.84□□□□□ -1.15
CDH3-210ENST00000569117 SRSF3P84103 164 aaKnown RBP7.84□□□□□ -1.15
CDH3-210ENST00000569117 IFITM2Q01629 132 aa7.84□□□□□ -1.15
CDH3-210ENST00000569117 GUK1Q16774 197 aa7.84□□□□□ -1.15
CDH3-210ENST00000569117 SAMD13Q5VXD3 122 aa7.84□□□□□ -1.15
CDH3-210ENST00000569117 LCN15Q6UWW0 184 aa7.84□□□□□ -1.15
CDH3-210ENST00000569117 RBPMS2Q6ZRY4 209 aaKnown RBP7.84□□□□□ -1.15
CDH3-210ENST00000569117 FXYD5Q96DB9 178 aa7.84□□□□□ -1.15
CDH3-210ENST00000569117 SAT2Q96F10 170 aaPredicted RBP7.84□□□□□ -1.15
CDH3-210ENST00000569117 C17orf77Q96MU5 243 aa7.84□□□□□ -1.15
CDH3-210ENST00000569117 SELENOKQ9Y6D0 94 aa7.84□□□□□ -1.15
CDH3-210ENST00000569117 NOTCH3Q9UM47 2321 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 IZUMO1RA6ND01 250 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 ZNF785A8K8V0 405 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 H3BQ15 152 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 TEX46H3BTG2 121 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 SOCS3O14543 225 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 ZNF253O75346 499 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 HBE1P02100 147 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 OR10J4P0C629 311 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 GCHFRP30047 84 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 FGF8P55075 233 aaPredicted RBP7.83□□□□□ -1.16
CDH3-210ENST00000569117 BLOC1S1P78537 153 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 PDE6HQ13956 83 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 ZNF767PQ75MW2 155 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 SUN5Q8TC36 379 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 DCANP1Q8TF63 244 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 MS4A6AQ9H2W1 248 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 TMEM167BQ9NRX6 74 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 ZNF586Q9NXT0 402 aa7.83□□□□□ -1.16
CDH3-210ENST00000569117 IGKV3-7A0A075B6H7 116 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 TRBV19A0A075B6N1 114 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 OR4C46A6NHA9 309 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 K7EQG2 157 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 SLC17A3O00476 420 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 NBEAP1P0C6P0 100 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 PSMB3P49720 205 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 PAFAH1B2P68402 229 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 NUDT10Q8NFP7 164 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 LYPD6BQ8NI32 183 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 SFT2D1Q8WV19 159 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 NUDT11Q96G61 164 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 SLC50A1Q9BRV3 221 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 ZNF256Q9Y2P7 627 aaPredicted RBP7.82□□□□□ -1.16
CDH3-210ENST00000569117 ARL2-SNX15V9GYD0 113 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 DNHD1Q96M86 4753 aa7.82□□□□□ -1.16
CDH3-210ENST00000569117 CMYA5Q8N3K9 4069 aa7.81□□□□□ -1.16
CDH3-210ENST00000569117 LOC102723971A0A1B0GUV8 181 aa7.81□□□□□ -1.16
CDH3-210ENST00000569117 ISLRO14498 428 aa7.81□□□□□ -1.16
CDH3-210ENST00000569117 NDUFB4O95168 129 aa7.81□□□□□ -1.16
CDH3-210ENST00000569117 NMBP08949 121 aa7.81□□□□□ -1.16
CDH3-210ENST00000569117 EGFEM1PQ0D2K5 195 aa7.81□□□□□ -1.16
CDH3-210ENST00000569117 CCDC28AQ8IWP9 274 aa7.81□□□□□ -1.16
CDH3-210ENST00000569117 IQCF2Q8IXL9 164 aa7.81□□□□□ -1.16
CDH3-210ENST00000569117 GBGT1Q8N5D6 347 aa7.81□□□□□ -1.16
CDH3-210ENST00000569117 ZNF331Q9NQX6 463 aaPredicted RBP7.81□□□□□ -1.16
CDH3-210ENST00000569117 MGAM2Q2M2H8 2515 aa7.8□□□□□ -1.16
CDH3-210ENST00000569117 TRAV8-2A0A0B4J237 113 aa7.8□□□□□ -1.16
CDH3-210ENST00000569117 A0A1B0GV50 99 aa7.8□□□□□ -1.16
CDH3-210ENST00000569117 H3BTX0 84 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms