RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 M6PRP20645 277 aa10.68□□□□□ -0.7
PKD1-236ENST00000568796 CCDC28AQ8IWP9 274 aa10.68□□□□□ -0.7
PKD1-236ENST00000568796 LRTM2Q8N967 370 aa10.68□□□□□ -0.7
PKD1-236ENST00000568796 RNASE8Q8TDE3 154 aaKnown RBP10.68□□□□□ -0.7
PKD1-236ENST00000568796 RXFP4Q8TDU9 374 aa10.68□□□□□ -0.7
PKD1-236ENST00000568796 CCDC59Q9P031 241 aaKnown RBP10.68□□□□□ -0.7
PKD1-236ENST00000568796 GAGE12BA1L429 117 aa10.67□□□□□ -0.7
PKD1-236ENST00000568796 H7BYZ3 331 aa10.67□□□□□ -0.7
PKD1-236ENST00000568796 GAGE7O76087 117 aa10.67□□□□□ -0.7
PKD1-236ENST00000568796 SFT2D2O95562 160 aa10.67□□□□□ -0.7
PKD1-236ENST00000568796 GAGE12FP0CL80 117 aa10.67□□□□□ -0.7
PKD1-236ENST00000568796 GAGE12GP0CL81 117 aa10.67□□□□□ -0.7
PKD1-236ENST00000568796 GAGE12IP0CL82 117 aa10.67□□□□□ -0.7
PKD1-236ENST00000568796 RRAS2P62070 204 aaPredicted RBP10.67□□□□□ -0.7
PKD1-236ENST00000568796 S100A7AQ86SG5 101 aa10.67□□□□□ -0.7
PKD1-236ENST00000568796 ARL6Q9H0F7 186 aa10.67□□□□□ -0.7
PKD1-236ENST00000568796 Q9H3A6 140 aa10.67□□□□□ -0.7
PKD1-236ENST00000568796 A0A087X0K7 114 aa10.66□□□□□ -0.7
PKD1-236ENST00000568796 ZNF701M0R085 212 aaPredicted RBP10.66□□□□□ -0.7
PKD1-236ENST00000568796 RLN2P04090 185 aa10.66□□□□□ -0.7
PKD1-236ENST00000568796 SNRPCP09234 159 aaKnown RBP10.66□□□□□ -0.7
PKD1-236ENST00000568796 PPP1R1AQ13522 171 aa10.66□□□□□ -0.7
PKD1-236ENST00000568796 KIR3DS1Q14943 382 aa10.66□□□□□ -0.7
PKD1-236ENST00000568796 ESRGQ1W209 222 aa10.66□□□□□ -0.7
PKD1-236ENST00000568796 CCDC190Q86UF4 302 aa10.66□□□□□ -0.7
PKD1-236ENST00000568796 TOMM5Q8N4H5 51 aa10.66□□□□□ -0.7
PKD1-236ENST00000568796 MCFD2Q8NI22 146 aa10.66□□□□□ -0.7
PKD1-236ENST00000568796 DYNC2LI1Q8TCX1 351 aa10.66□□□□□ -0.7
PKD1-236ENST00000568796 PARD6GQ9BYG4 376 aaPredicted RBP10.66□□□□□ -0.7
PKD1-236ENST00000568796 MRPS26Q9BYN8 205 aaKnown RBP10.66□□□□□ -0.7
PKD1-236ENST00000568796 ZNF586Q9NXT0 402 aa10.66□□□□□ -0.7
PKD1-236ENST00000568796 PSENENQ9NZ42 101 aa10.66□□□□□ -0.7
PKD1-236ENST00000568796 PMS2P5A8MQ11 134 aa10.65□□□□□ -0.7
PKD1-236ENST00000568796 SNURFLB1AK76 121 aa10.65□□□□□ -0.7
PKD1-236ENST00000568796 J3KRW8 73 aa10.65□□□□□ -0.7
PKD1-236ENST00000568796 TNFSF8P32971 234 aa10.65□□□□□ -0.7
PKD1-236ENST00000568796 AP3S2P59780 193 aa10.65□□□□□ -0.7
PKD1-236ENST00000568796 PLP1P60201 277 aa10.65□□□□□ -0.7
PKD1-236ENST00000568796 SELENOTP62341 195 aa10.65□□□□□ -0.7
PKD1-236ENST00000568796 POLR2GP62487 172 aaKnown RBP eCLIP10.65□□□□□ -0.7
PKD1-236ENST00000568796 ZNF503Q96F45 646 aa10.65□□□□□ -0.7
PKD1-236ENST00000568796 A0A1W2PPQ1 181 aa10.64□□□□□ -0.71
PKD1-236ENST00000568796 SSSCA1O60232 199 aa10.64□□□□□ -0.71
PKD1-236ENST00000568796 BTF3P20290 206 aaKnown RBP10.64□□□□□ -0.71
PKD1-236ENST00000568796 HOXA5P20719 270 aa10.64□□□□□ -0.71
PKD1-236ENST00000568796 PYDC2Q56P42 97 aa10.64□□□□□ -0.71
PKD1-236ENST00000568796 RAB2BQ8WUD1 216 aa10.64□□□□□ -0.71
PKD1-236ENST00000568796 SOSTQ9BQB4 213 aa10.64□□□□□ -0.71
PKD1-236ENST00000568796 C20orf144Q9BQM9 153 aa10.64□□□□□ -0.71
PKD1-236ENST00000568796 SLC25A21Q9BQT8 299 aaPredicted RBP10.64□□□□□ -0.71
PKD1-236ENST00000568796 UPK3BQ9BT76 320 aa10.64□□□□□ -0.71
PKD1-236ENST00000568796 ARV1Q9H2C2 271 aa10.64□□□□□ -0.71
PKD1-236ENST00000568796 RNF24Q9Y225 148 aa10.64□□□□□ -0.71
PKD1-236ENST00000568796 MRPS16Q9Y3D3 137 aaKnown RBP10.64□□□□□ -0.71
PKD1-236ENST00000568796 EPM2AB3EWF7 344 aa10.63□□□□□ -0.71
PKD1-236ENST00000568796 CCNKO75909 580 aa10.63□□□□□ -0.71
PKD1-236ENST00000568796 SLC38A11Q08AI6 406 aa10.63□□□□□ -0.71
PKD1-236ENST00000568796 GFI1BQ5VTD9 330 aa10.63□□□□□ -0.71
PKD1-236ENST00000568796 LCN15Q6UWW0 184 aa10.63□□□□□ -0.71
PKD1-236ENST00000568796 PATE2Q6UY27 113 aa10.63□□□□□ -0.71
PKD1-236ENST00000568796 LINC00612Q8N6U2 182 aa10.63□□□□□ -0.71
PKD1-236ENST00000568796 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
PKD1-236ENST00000568796 MGAT4CQ9UBM8 478 aa10.63□□□□□ -0.71
PKD1-236ENST00000568796 HERC1Q15751 4861 aa10.63□□□□□ -0.71
PKD1-236ENST00000568796 H3BTX0 84 aa10.62□□□□□ -0.71
PKD1-236ENST00000568796 CXCL2P19875 107 aa10.62□□□□□ -0.71
PKD1-236ENST00000568796 ID3Q02535 119 aa10.62□□□□□ -0.71
PKD1-236ENST00000568796 LINC00305Q7Z4B0 112 aa10.62□□□□□ -0.71
PKD1-236ENST00000568796 TMPRSS5Q9H3S3 457 aa10.62□□□□□ -0.71
PKD1-236ENST00000568796 NPVFQ9HCQ7 196 aa10.62□□□□□ -0.71
PKD1-236ENST00000568796 ZNF331Q9NQX6 463 aaPredicted RBP10.62□□□□□ -0.71
PKD1-236ENST00000568796 TRAV12-3A0A0B4J271 114 aa10.61□□□□□ -0.71
PKD1-236ENST00000568796 PRAC2D3DTV9 90 aa10.61□□□□□ -0.71
PKD1-236ENST00000568796 GOSR2O14653 212 aa10.61□□□□□ -0.71
PKD1-236ENST00000568796 MRPS12O15235 138 aaKnown RBP10.61□□□□□ -0.71
PKD1-236ENST00000568796 NOL3O60936 208 aaKnown RBP10.61□□□□□ -0.71
PKD1-236ENST00000568796 METTL15P1P0C7V9 234 aa10.61□□□□□ -0.71
PKD1-236ENST00000568796 LINC00315P59091 139 aa10.61□□□□□ -0.71
PKD1-236ENST00000568796 TEPPQ6URK8 271 aa10.61□□□□□ -0.71
PKD1-236ENST00000568796 TRIM63Q969Q1 353 aa10.61□□□□□ -0.71
PKD1-236ENST00000568796 SLIRPQ9GZT3 109 aaKnown RBP10.61□□□□□ -0.71
PKD1-236ENST00000568796 PTTG2Q9NZH5 202 aa10.61□□□□□ -0.71
PKD1-236ENST00000568796 H3BNG1 76 aa10.6□□□□□ -0.71
PKD1-236ENST00000568796 SCGB1D2O95969 90 aa10.6□□□□□ -0.71
PKD1-236ENST00000568796 FUSP35637 526 aaKnown RBP eCLIP10.6□□□□□ -0.71
PKD1-236ENST00000568796 TMBIM6P55061 237 aa10.6□□□□□ -0.71
PKD1-236ENST00000568796 BPIFA4PQ86YQ2 179 aa10.6□□□□□ -0.71
PKD1-236ENST00000568796 OR10P1Q8NGE3 313 aa10.6□□□□□ -0.71
PKD1-236ENST00000568796 SMIM8Q96KF7 97 aa10.6□□□□□ -0.71
PKD1-236ENST00000568796 TRGV2A0A075B6R0 118 aa10.59□□□□□ -0.71
PKD1-236ENST00000568796 SLC17A3O00476 420 aa10.59□□□□□ -0.71
PKD1-236ENST00000568796 EREGO14944 169 aa10.59□□□□□ -0.71
PKD1-236ENST00000568796 COX7A2P2O60397 106 aa10.59□□□□□ -0.71
PKD1-236ENST00000568796 LEPP41159 167 aa10.59□□□□□ -0.71
PKD1-236ENST00000568796 PXDC1Q5TGL8 231 aa10.59□□□□□ -0.71
PKD1-236ENST00000568796 Q6ZTI0 123 aa10.59□□□□□ -0.71
PKD1-236ENST00000568796 ZNF546Q86UE3 836 aa10.59□□□□□ -0.71
PKD1-236ENST00000568796 A0A096LPF7 62 aa10.58□□□□□ -0.72
PKD1-236ENST00000568796 C9orf170A2RU37 121 aa10.58□□□□□ -0.72
PKD1-236ENST00000568796 INAFM2P0DMQ5 153 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms