RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PPP1R14DQ9NXH3 145 aa10.84□□□□□ -0.67
NME3-211ENST00000568561 HYPMO75409 117 aa10.83□□□□□ -0.68
NME3-211ENST00000568561 ADAP1O75689 374 aa10.83□□□□□ -0.68
NME3-211ENST00000568561 UPK1BO75841 260 aa10.83□□□□□ -0.68
NME3-211ENST00000568561 CDK2AP2O75956 126 aa10.83□□□□□ -0.68
NME3-211ENST00000568561 SNRPCP09234 159 aaKnown RBP10.83□□□□□ -0.68
NME3-211ENST00000568561 IL7P13232 177 aa10.83□□□□□ -0.68
NME3-211ENST00000568561 RPL7P18124 248 aaKnown RBP10.83□□□□□ -0.68
NME3-211ENST00000568561 CCL18P55774 89 aa10.83□□□□□ -0.68
NME3-211ENST00000568561 RAP2BP61225 183 aa10.83□□□□□ -0.68
NME3-211ENST00000568561 B2MP61769 119 aa10.83□□□□□ -0.68
NME3-211ENST00000568561 RRAS2P62070 204 aaPredicted RBP10.83□□□□□ -0.68
NME3-211ENST00000568561 POLR2GP62487 172 aaKnown RBP eCLIP10.83□□□□□ -0.68
NME3-211ENST00000568561 TMEM144Q7Z5S9 345 aa10.83□□□□□ -0.68
NME3-211ENST00000568561 PARD6GQ9BYG4 376 aaPredicted RBP10.83□□□□□ -0.68
NME3-211ENST00000568561 KRTAP1-5Q9BYS1 174 aa10.83□□□□□ -0.68
NME3-211ENST00000568561 CBY3A6NI87 242 aa10.82□□□□□ -0.68
NME3-211ENST00000568561 TAS2R60P59551 318 aa10.82□□□□□ -0.68
NME3-211ENST00000568561 IFITM3Q01628 133 aa10.82□□□□□ -0.68
NME3-211ENST00000568561 CLINT1Q14677 625 aa10.82□□□□□ -0.68
NME3-211ENST00000568561 KIR3DS1Q14943 382 aa10.82□□□□□ -0.68
NME3-211ENST00000568561 PSG3Q16557 428 aa10.82□□□□□ -0.68
NME3-211ENST00000568561 SSX7Q7RTT5 188 aa10.82□□□□□ -0.68
NME3-211ENST00000568561 LRRC20Q8TCA0 184 aa10.82□□□□□ -0.68
NME3-211ENST00000568561 C16orf74Q96GX8 76 aa10.82□□□□□ -0.68
NME3-211ENST00000568561 NOP10Q9NPE3 64 aaKnown RBP10.82□□□□□ -0.68
NME3-211ENST00000568561 SSSCA1O60232 199 aa10.81□□□□□ -0.68
NME3-211ENST00000568561 S100A7P31151 101 aa10.81□□□□□ -0.68
NME3-211ENST00000568561 AP3S2P59780 193 aa10.81□□□□□ -0.68
NME3-211ENST00000568561 SPATA12Q7Z6I5 190 aa10.81□□□□□ -0.68
NME3-211ENST00000568561 TMEM256Q8N2U0 113 aa10.81□□□□□ -0.68
NME3-211ENST00000568561 RPUSD4Q96CM3 377 aaKnown RBP10.81□□□□□ -0.68
NME3-211ENST00000568561 ARL6Q9H0F7 186 aa10.81□□□□□ -0.68
NME3-211ENST00000568561 PSENENQ9NZ42 101 aa10.81□□□□□ -0.68
NME3-211ENST00000568561 TIMM8BQ9Y5J9 83 aaPredicted RBP10.81□□□□□ -0.68
NME3-211ENST00000568561 A0A087X0K7 114 aa10.8□□□□□ -0.68
NME3-211ENST00000568561 A0A0J9YY99 117 aa10.8□□□□□ -0.68
NME3-211ENST00000568561 PMS2P5A8MQ11 134 aa10.8□□□□□ -0.68
NME3-211ENST00000568561 H3BTX0 84 aa10.8□□□□□ -0.68
NME3-211ENST00000568561 SLC38A11Q08AI6 406 aa10.8□□□□□ -0.68
NME3-211ENST00000568561 OR5I1Q13606 314 aa10.8□□□□□ -0.68
NME3-211ENST00000568561 TRIQKQ629K1 86 aa10.8□□□□□ -0.68
NME3-211ENST00000568561 PATE2Q6UY27 113 aa10.8□□□□□ -0.68
NME3-211ENST00000568561 RNASE8Q8TDE3 154 aaKnown RBP10.8□□□□□ -0.68
NME3-211ENST00000568561 DEDD2Q8WXF8 326 aa10.8□□□□□ -0.68
NME3-211ENST00000568561 SLC25A21Q9BQT8 299 aaPredicted RBP10.8□□□□□ -0.68
NME3-211ENST00000568561 TRAV26-1A0A087WT03 109 aa10.79□□□□□ -0.68
NME3-211ENST00000568561 MRPS12O15235 138 aaKnown RBP10.79□□□□□ -0.68
NME3-211ENST00000568561 METTL15P1P0C7V9 234 aa10.79□□□□□ -0.68
NME3-211ENST00000568561 CDKN1BP46527 198 aa10.79□□□□□ -0.68
NME3-211ENST00000568561 PLP1P60201 277 aa10.79□□□□□ -0.68
NME3-211ENST00000568561 ID3Q02535 119 aa10.79□□□□□ -0.68
NME3-211ENST00000568561 TMEM263Q8WUH6 116 aaKnown RBP10.79□□□□□ -0.68
NME3-211ENST00000568561 ARV1Q9H2C2 271 aa10.79□□□□□ -0.68
NME3-211ENST00000568561 PRAC2D3DTV9 90 aa10.78□□□□□ -0.68
NME3-211ENST00000568561 PLA2G10O15496 165 aa10.78□□□□□ -0.68
NME3-211ENST00000568561 ANXA7P20073 488 aaKnown RBP10.78□□□□□ -0.68
NME3-211ENST00000568561 SELENOTP62341 195 aa10.78□□□□□ -0.68
NME3-211ENST00000568561 GNPNAT1Q96EK6 184 aaPredicted RBP10.78□□□□□ -0.68
NME3-211ENST00000568561 Q9H8V8 135 aa10.78□□□□□ -0.68
NME3-211ENST00000568561 C9orf170A2RU37 121 aa10.77□□□□□ -0.69
NME3-211ENST00000568561 H7BYZ3 331 aa10.77□□□□□ -0.69
NME3-211ENST00000568561 J3KRW8 73 aa10.77□□□□□ -0.69
NME3-211ENST00000568561 SLC17A3O00476 420 aa10.77□□□□□ -0.69
NME3-211ENST00000568561 SCGB1D2O95969 90 aa10.77□□□□□ -0.69
NME3-211ENST00000568561 HOXA5P20719 270 aa10.77□□□□□ -0.69
NME3-211ENST00000568561 KRTAP10-2P60368 255 aa10.77□□□□□ -0.69
NME3-211ENST00000568561 DLK1P80370 383 aa10.77□□□□□ -0.69
NME3-211ENST00000568561 ASAH1Q13510 395 aa10.77□□□□□ -0.69
NME3-211ENST00000568561 GFI1BQ5VTD9 330 aa10.77□□□□□ -0.69
NME3-211ENST00000568561 ZNF493Q6ZR52 646 aa10.77□□□□□ -0.69
NME3-211ENST00000568561 GAGE12BA1L429 117 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 GAGE7O76087 117 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 GAGE12FP0CL80 117 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 GAGE12GP0CL81 117 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 GAGE12IP0CL82 117 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 INPP1P49441 399 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 MORN5Q5VZ52 161 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 LCN15Q6UWW0 184 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 TMEM14EPQ6UXP3 125 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 Q8N1X5 172 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 SMIM8Q96KF7 97 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 ZNF331Q9NQX6 463 aaPredicted RBP10.76□□□□□ -0.69
NME3-211ENST00000568561 FLVCR2Q9UPI3 526 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 HERC1Q15751 4861 aa10.76□□□□□ -0.69
NME3-211ENST00000568561 NAP1L6A6NFF2 107 aa10.75□□□□□ -0.69
NME3-211ENST00000568561 M6PRP20645 277 aa10.75□□□□□ -0.69
NME3-211ENST00000568561 TEPPQ6URK8 271 aa10.75□□□□□ -0.69
NME3-211ENST00000568561 LINC00305Q7Z4B0 112 aa10.75□□□□□ -0.69
NME3-211ENST00000568561 LINC00612Q8N6U2 182 aa10.75□□□□□ -0.69
NME3-211ENST00000568561 OR10J6PQ8NGY7 276 aa10.75□□□□□ -0.69
NME3-211ENST00000568561 RXFP4Q8TDU9 374 aa10.75□□□□□ -0.69
NME3-211ENST00000568561 SCRT2Q9NQ03 307 aa10.75□□□□□ -0.69
NME3-211ENST00000568561 MGAT4CQ9UBM8 478 aa10.75□□□□□ -0.69
NME3-211ENST00000568561 LINC00854A0A1B0GVQ3 168 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 K7EPK0 472 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 GOSR2O14653 212 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 LYRM1O43325 122 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 CXCL2P19875 107 aa10.74□□□□□ -0.69
NME3-211ENST00000568561 DEFA1P59665 94 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms