RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	SCP2D1	Q9UJQ7	156 aa		7.82	□□□□□ -1.16
TCF4-238	ENST00000568169		A0A087X0K7	114 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	PIGBOS1	A0A0B4J2F0	54 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	DUXB	A0A1W2PPF3	345 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	ANKRD20A5P	A0PJZ0	165 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	GAGE12B	A1L429	117 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	CTDSP2	O14595	271 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	CTDSPL	O15194	276 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	MED6	O75586	246 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	GAGE7	O76087	117 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	GAGE12F	P0CL80	117 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	GAGE12G	P0CL81	117 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	GAGE12I	P0CL82	117 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	SLC25A6	P12236	298 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	ANXA3	P12429	323 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	FUS	P35637	526 aa	Known RBP eCLIP	7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	FRZB	Q92765	325 aa		7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	RPUSD4	Q96CM3	377 aa	Known RBP	7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	CIB3	Q96Q77	187 aa	Predicted RBP	7.81	□□□□□ -1.16
TCF4-238	ENST00000568169	EREG	O14944	169 aa		7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	RGS5	O15539	181 aa		7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	RLN2	P04090	185 aa		7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	PRB4	P10163	310 aa	Predicted RBP	7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	PLP1	P60201	277 aa		7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	RAP2B	P61225	183 aa		7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	RPP30	P78346	268 aa	Known RBP	7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	AKR1C1	Q04828	323 aa		7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	KIR3DS1	Q14943	382 aa		7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	CYP2G1P	Q6ZSU1	146 aa		7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	CCDC28A	Q8IWP9	274 aa		7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	VSIG2	Q96IQ7	327 aa		7.8	□□□□□ -1.16
TCF4-238	ENST00000568169	HIGD1A	Q9Y241	93 aa		7.8	□□□□□ -1.16
TCF4-238	ENST00000568169		A0A096LPF7	62 aa		7.79	□□□□□ -1.16
TCF4-238	ENST00000568169	WRB	O00258	174 aa		7.79	□□□□□ -1.16
TCF4-238	ENST00000568169	MRPS12	O15235	138 aa	Known RBP	7.79	□□□□□ -1.16
TCF4-238	ENST00000568169	SYNGR2	O43760	224 aa		7.79	□□□□□ -1.16
TCF4-238	ENST00000568169	HYPM	O75409	117 aa		7.79	□□□□□ -1.16
TCF4-238	ENST00000568169	IL5	P05113	134 aa		7.79	□□□□□ -1.16
TCF4-238	ENST00000568169	KRTAP10-1	P60331	282 aa		7.79	□□□□□ -1.16
TCF4-238	ENST00000568169	ERVFC1-1	P60608	527 aa		7.79	□□□□□ -1.16
TCF4-238	ENST00000568169	ACOT7L	Q6ZUV0	252 aa		7.79	□□□□□ -1.16
TCF4-238	ENST00000568169	LRTM2	Q8N967	370 aa		7.79	□□□□□ -1.16
TCF4-238	ENST00000568169	SNURFL	B1AK76	121 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	SIVA1	O15304	175 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	OR5G3	P0C626	314 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	LINC00869	P0C866	280 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	DAZ2	Q13117	558 aa	Known RBP	7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	IL18	Q14116	193 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	SPANXN5	Q5MJ07	72 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	GFI1B	Q5VTD9	330 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	LRRC20	Q8TCA0	184 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	DIRAS2	Q96HU8	199 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	PARD6G	Q9BYG4	376 aa	Predicted RBP	7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	TMPRSS5	Q9H3S3	457 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	ZNF331	Q9NQX6	463 aa	Predicted RBP	7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	MCUB	Q9NWR8	336 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	RABL2A	Q9UBK7	228 aa	Predicted RBP	7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	RABL2B	Q9UNT1	228 aa		7.78	□□□□□ -1.16
TCF4-238	ENST00000568169	LOC100996750	A0A140TA64	210 aa		7.77	□□□□□ -1.17
TCF4-238	ENST00000568169	PMS2P5	A8MQ11	134 aa		7.77	□□□□□ -1.17
TCF4-238	ENST00000568169	CXCL2	P19875	107 aa		7.77	□□□□□ -1.17
TCF4-238	ENST00000568169	SELENOT	P62341	195 aa		7.77	□□□□□ -1.17
TCF4-238	ENST00000568169	TMEM128	Q5BJH2	165 aa		7.77	□□□□□ -1.17
TCF4-238	ENST00000568169		Q6ZTI0	123 aa		7.77	□□□□□ -1.17
TCF4-238	ENST00000568169	C18orf15	Q96N68	181 aa		7.77	□□□□□ -1.17
TCF4-238	ENST00000568169	KRTAP4-6	Q9BYQ5	205 aa		7.77	□□□□□ -1.17
TCF4-238	ENST00000568169	MDFIC	Q9P1T7	246 aa		7.77	□□□□□ -1.17
TCF4-238	ENST00000568169	STRAP	Q9Y3F4	350 aa	Known RBP	7.77	□□□□□ -1.17
TCF4-238	ENST00000568169	TNFRSF18	Q9Y5U5	241 aa		7.77	□□□□□ -1.17
TCF4-238	ENST00000568169		A0A087WTM6	91 aa		7.76	□□□□□ -1.17
TCF4-238	ENST00000568169		H3BP45	60 aa		7.76	□□□□□ -1.17
TCF4-238	ENST00000568169	NXPH4	O95158	308 aa		7.76	□□□□□ -1.17
TCF4-238	ENST00000568169	IFNA5	P01569	189 aa		7.76	□□□□□ -1.17
TCF4-238	ENST00000568169	C4orf46	Q504U0	113 aa		7.76	□□□□□ -1.17
TCF4-238	ENST00000568169	LCN15	Q6UWW0	184 aa		7.76	□□□□□ -1.17
TCF4-238	ENST00000568169	PATE2	Q6UY27	113 aa		7.76	□□□□□ -1.17
TCF4-238	ENST00000568169	TMED4	Q7Z7H5	227 aa		7.76	□□□□□ -1.17
TCF4-238	ENST00000568169	S100A7A	Q86SG5	101 aa		7.76	□□□□□ -1.17
TCF4-238	ENST00000568169	SLC50A1	Q9BRV3	221 aa		7.76	□□□□□ -1.17
TCF4-238	ENST00000568169	RNF24	Q9Y225	148 aa		7.76	□□□□□ -1.17
TCF4-238	ENST00000568169	SMCO3	A2RU48	225 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	PRAC2	D3DTV9	90 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169		K7EPK0	472 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	SMR3B	P02814	79 aa	Predicted RBP	7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	DNAH10OS	P0CZ25	163 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	ANXA7	P20073	488 aa	Known RBP	7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	VAMP1	P23763	118 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	ID3	Q02535	119 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	ICAM4	Q14773	271 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	CCDC190	Q86UF4	302 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	NFE4	Q86UQ8	179 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	PYGO2	Q9BRQ0	406 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	ARL6	Q9H0F7	186 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	ARV1	Q9H2C2	271 aa		7.75	□□□□□ -1.17
TCF4-238	ENST00000568169	TRAV12-3	A0A0B4J271	114 aa		7.74	□□□□□ -1.17
TCF4-238	ENST00000568169	CT45A10	P0DMU9	189 aa		7.74	□□□□□ -1.17
TCF4-238	ENST00000568169	SPCS2	Q15005	226 aa		7.74	□□□□□ -1.17
TCF4-238	ENST00000568169	PXDC1	Q5TGL8	231 aa		7.74	□□□□□ -1.17
TCF4-238	ENST00000568169	ZNF431	Q8TF32	576 aa	Predicted RBP	7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms