RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 ACACAQ13085 2346 aa10.07□□□□□ -0.8
CSPG4P13-202ENST00000567704 ARHGAP21Q5T5U3 1957 aa10.07□□□□□ -0.8
CSPG4P13-202ENST00000567704 H0YJW9 148 aa10.07□□□□□ -0.8
CSPG4P13-202ENST00000567704 NPC2P61916 151 aa10.07□□□□□ -0.8
CSPG4P13-202ENST00000567704 C2orf82Q6UX34 121 aa10.07□□□□□ -0.8
CSPG4P13-202ENST00000567704 DEFB125Q8N687 156 aa10.07□□□□□ -0.8
CSPG4P13-202ENST00000567704 NUP37Q8NFH4 326 aa10.07□□□□□ -0.8
CSPG4P13-202ENST00000567704 LINC01560Q8TB33 94 aa10.07□□□□□ -0.8
CSPG4P13-202ENST00000567704 PCNX1Q96RV3 2341 aa10.07□□□□□ -0.8
CSPG4P13-202ENST00000567704 IGHV3-11P01762 117 aa10.07□□□□□ -0.8
CSPG4P13-202ENST00000567704 LTBRP36941 435 aa10.07□□□□□ -0.8
CSPG4P13-202ENST00000567704 H3BMG7 143 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 SAP30O75446 220 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 AMTNQ6UX39 209 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 FAM168AQ92567 244 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 ZNF492Q9P255 531 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 M0R2P5 195 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 ATXN8Q156A1 80 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 ZNF562Q6V9R5 426 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 F8W1H4 67 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 LYNX1G3V0Z9 82 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 TNFRSF6BO95407 300 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 LYNX1P0DP58 116 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 PAX1P15863 534 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 ZNRD1Q9P1U0 126 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 DENND4AQ7Z401 1863 aa10.06□□□□□ -0.8
CSPG4P13-202ENST00000567704 K7ERJ3 54 aa10.05□□□□□ -0.8
CSPG4P13-202ENST00000567704 RHOGP84095 191 aa10.05□□□□□ -0.8
CSPG4P13-202ENST00000567704 CT83Q5H943 113 aa10.05□□□□□ -0.8
CSPG4P13-202ENST00000567704 WFDC12Q8WWY7 111 aa10.05□□□□□ -0.8
CSPG4P13-202ENST00000567704 FAM104BQ5XKR9 115 aa10.05□□□□□ -0.8
CSPG4P13-202ENST00000567704 CSTL1Q9H114 145 aa10.05□□□□□ -0.8
CSPG4P13-202ENST00000567704 CACNA1BQ00975 2339 aa10.05□□□□□ -0.8
CSPG4P13-202ENST00000567704 RRN3P1Q2M238 152 aa10.05□□□□□ -0.8
CSPG4P13-202ENST00000567704 TMEM200BQ69YZ2 307 aa10.05□□□□□ -0.8
CSPG4P13-202ENST00000567704 CNTFRP26992 372 aa10.05□□□□□ -0.8
CSPG4P13-202ENST00000567704 TMEM14BQ9NUH8 114 aa10.05□□□□□ -0.8
CSPG4P13-202ENST00000567704 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 CLEC2AQ6UVW9 174 aa10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 ETV2O00321 342 aaPredicted RBP10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 LYPD6Q86Y78 171 aa10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 WNT2P09544 360 aa10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 CD28P10747 220 aa10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 LGALS9BQ3B8N2 356 aa10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 LGALS9CQ6DKI2 356 aa10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 DUX5Q96PT3 197 aa10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 LINC01549A6NIU2 74 aa10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 SP9P0CG40 484 aa10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 TNFRSF14Q92956 283 aa10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 SPAG8Q99932 426 aaPredicted RBP10.04□□□□□ -0.8
CSPG4P13-202ENST00000567704 IGLV3-1P01715 115 aa10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 CENPVQ7Z7K6 275 aaPredicted RBP10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 C14orf178Q8N769 122 aaPredicted RBP10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 C9orf172C9J069 976 aa10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 Q0VFX4 171 aa10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 LYPD1Q8N2G4 141 aa10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 YAE1D1Q9NRH1 226 aa10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 KLF12Q9Y4X4 402 aa10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 SLC25A15Q9Y619 301 aa10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 ARFGEF3Q5TH69 2177 aa10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 A0A1W2PPI3 338 aa10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 ZFP36L1Q07352 338 aaKnown RBP10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 ZNF474Q6S9Z5 364 aaPredicted RBP10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 SIGLEC8Q9NYZ4 499 aa10.03□□□□□ -0.8
CSPG4P13-202ENST00000567704 PPDPFLQ8WWR9 84 aa10.02□□□□□ -0.8
CSPG4P13-202ENST00000567704 VGLL1Q99990 258 aa10.02□□□□□ -0.8
CSPG4P13-202ENST00000567704 USF3Q68DE3 2245 aa10.02□□□□□ -0.81
CSPG4P13-202ENST00000567704 MRPL51Q4U2R6 128 aaKnown RBP10.02□□□□□ -0.81
CSPG4P13-202ENST00000567704 NLRC5Q86WI3 1866 aa10.02□□□□□ -0.81
CSPG4P13-202ENST00000567704 TEX48A0A1B0GUV7 120 aa10.02□□□□□ -0.81
CSPG4P13-202ENST00000567704 IGHV1-8P0DP01 117 aa10.02□□□□□ -0.81
CSPG4P13-202ENST00000567704 LMO1P25800 156 aa10.02□□□□□ -0.81
CSPG4P13-202ENST00000567704 DUX3Q96PT4 197 aa10.02□□□□□ -0.81
CSPG4P13-202ENST00000567704 IGHV1-3A0A0C4DH29 117 aa10.01□□□□□ -0.81
CSPG4P13-202ENST00000567704 HAX1O00165 279 aa10.01□□□□□ -0.81
CSPG4P13-202ENST00000567704 SIGLEC9Q9Y336 463 aa10.01□□□□□ -0.81
CSPG4P13-202ENST00000567704 PLXNA4Q9HCM2 1894 aa10.01□□□□□ -0.81
CSPG4P13-202ENST00000567704 LINC00173Q6ZV60 143 aa10.01□□□□□ -0.81
CSPG4P13-202ENST00000567704 C8orf49Q96NF6 230 aa10.01□□□□□ -0.81
CSPG4P13-202ENST00000567704 PRDM6Q9NQX0 595 aa10.01□□□□□ -0.81
CSPG4P13-202ENST00000567704 ABCA4P78363 2273 aa10.01□□□□□ -0.81
CSPG4P13-202ENST00000567704 TRAV8-3A0A0A6YYJ7 113 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 WDR86Q86TI4 376 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 TMEM190Q8WZ59 177 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 GAFA1Q96PS6 74 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 DPH3P1Q9H4G8 78 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 SLC25A16P16260 332 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 ZC2HC1AQ96GY0 325 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 TMEM101Q96IK0 257 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 ZNF48Q96MX3 618 aaPredicted RBP10□□□□□ -0.81
CSPG4P13-202ENST00000567704 ZNF747Q9BV97 191 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 DKK2Q9UBU2 259 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10□□□□□ -0.81
CSPG4P13-202ENST00000567704 PRR20EP86478 221 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 PRR20CP86479 221 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 PRR20DP86480 221 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 PRR20BP86481 221 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 PRR20AP86496 221 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 C15orf32Q32M92 178 aa10□□□□□ -0.81
CSPG4P13-202ENST00000567704 SHANK2-AS3Q9BTD1 123 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms