RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 RBMY1A1P0DJD3 496 aaKnown RBP5.02□□□□□ -1.61
SF3B3-209ENST00000567635 RBMY1CP0DJD4 496 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 HLA-DRB4P13762 266 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 MIFP14174 115 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 ORM2P19652 201 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 RAB4AP20338 218 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 GATA2P23769 480 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-209ENST00000567635 GALR1P47211 349 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 PSMB3P49720 205 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 PAX9P55771 341 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 TAS2R30P59541 319 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 SELENOTP62341 195 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 DLK1P80370 383 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 RBMY1FQ15415 496 aaKnown RBP5.02□□□□□ -1.61
SF3B3-209ENST00000567635 LBHQ53QV2 105 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-209ENST00000567635 SAMD13Q5VXD3 122 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 SPATA31B1PQ5VZV4 182 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 Q8NAQ8 132 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 OR1B1Q8NGR6 318 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 CLUHP3Q96NS8 147 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 GPR82Q96P67 336 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 RSG1Q9BU20 258 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 RNF126Q9BV68 326 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 TMEM147Q9BVK8 224 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 CLEC5AQ9NY25 188 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 XCL2Q9UBD3 114 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 HLA-DRB4X5D2U9 266 aa5.02□□□□□ -1.61
SF3B3-209ENST00000567635 IGHV4-28A0A0C4DH34 117 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 FAM74A7A6NL05 159 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 PMS2P5A8MQ11 134 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 PRSS47A8MTI9 375 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 FNDC10F2Z333 226 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 SOCS3O14543 225 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 HYPMO75409 117 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 IGKV3-20P01619 116 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 MBPP02686 304 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-209ENST00000567635 METTL15P1P0C7V9 234 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 TAS2R60P59551 318 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 FAM74A3Q4VXF1 159 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 EBLN2Q6P2I7 272 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 TMEM14EPQ6UXP3 125 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 TMEM182Q6ZP80 229 aaPredicted RBP5.01□□□□□ -1.61
SF3B3-209ENST00000567635 FOXI2Q6ZQN5 318 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 CYP2G1PQ6ZSU1 146 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 ACOT7LQ6ZUV0 252 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 ZNF546Q86UE3 836 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 OR10P1Q8NGE3 313 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 THAP6Q8TBB0 222 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 PPP1R1CQ8WVI7 109 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 PCNPQ8WW12 178 aaKnown RBP5.01□□□□□ -1.61
SF3B3-209ENST00000567635 LINC00476Q8WZB0 136 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 C16orf92Q96LL3 132 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 PFDN5Q99471 154 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 HRH4Q9H3N8 390 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 SLC25A22Q9H936 323 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 NPVFQ9HCQ7 196 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 RPRMQ9NS64 109 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 X6R8D5 127 aa5.01□□□□□ -1.61
SF3B3-209ENST00000567635 A0A0D9SG52 128 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 C1orf196B1AJZ1 125 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 C11orf94C9JXX5 98 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 DEDDO75618 318 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 OR5G3P0C626 314 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 CXCL2P19875 107 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 S100A11P31949 105 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 DEFB1P60022 68 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 PLP1P60201 277 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 VAMP2P63027 116 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 PSG9Q00887 426 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 GDF5OSQ5U4N7 250 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 FAM78BQ5VT40 261 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 TEPPQ6URK8 271 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 ATRAIDQ6UW56 229 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 TMUB2Q71RG4 321 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 S100A7AQ86SG5 101 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 OR4B1Q8NGF8 309 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 C2CD4CQ8TF44 421 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 SHANK2-AS3Q9BTD1 123 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 GGACTQ9BVM4 153 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 SLC25A39Q9BZJ4 359 aaPredicted RBP5□□□□□ -1.61
SF3B3-209ENST00000567635 HIGD1AQ9Y241 93 aa5□□□□□ -1.61
SF3B3-209ENST00000567635 RCL1Q9Y2P8 373 aaKnown RBP5□□□□□ -1.61
SF3B3-209ENST00000567635 LYSTQ99698 3801 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 ELOA3CA0A087WX78 387 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-209ENST00000567635 FXYD6-FXYD2A0A087WZ82 144 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 A0A0J9YX75 114 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 SMIM9A6NGZ8 99 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 H0YIZ8 118 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 K7EPK0 472 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 LINC00869P0C866 280 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 HLA-DMBP28068 263 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 TCTAP57738 103 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 FXYD7P58549 80 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 RAB2AP61019 212 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 ARL16Q0P5N6 197 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 LGALS9CQ6DKI2 356 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 ZNF705AQ6ZN79 300 aaPredicted RBP4.99□□□□□ -1.61
SF3B3-209ENST00000567635 KCNRGQ8N5I3 272 aa4.99□□□□□ -1.61
SF3B3-209ENST00000567635 INO80EQ8NBZ0 244 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms