RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 ZNF48Q96MX3 618 aaPredicted RBP18.33■□□□□ 0.52
LINC00543-201ENST00000567234 RASL11BQ9BPW5 248 aa18.33■□□□□ 0.52
LINC00543-201ENST00000567234 ABCA12Q86UK0 2595 aa18.32■□□□□ 0.52
LINC00543-201ENST00000567234 IGLV11-55A0A075B6I3 123 aa18.32■□□□□ 0.52
LINC00543-201ENST00000567234 IZUMO1RA6ND01 250 aa18.32■□□□□ 0.52
LINC00543-201ENST00000567234 HELTA6NFD8 242 aa18.32■□□□□ 0.52
LINC00543-201ENST00000567234 GGTLC3B5MD39 225 aa18.32■□□□□ 0.52
LINC00543-201ENST00000567234 CHRDL1Q9BU40 450 aa18.32■□□□□ 0.52
LINC00543-201ENST00000567234 IGHV7-81A0A0B4J1V7 117 aa18.31■□□□□ 0.52
LINC00543-201ENST00000567234 APCSP02743 223 aa18.31■□□□□ 0.52
LINC00543-201ENST00000567234 NDPQ00604 133 aa18.31■□□□□ 0.52
LINC00543-201ENST00000567234 FAM120AOSQ5T036 256 aa18.31■□□□□ 0.52
LINC00543-201ENST00000567234 FANCD2OSQ96PS1 177 aa18.31■□□□□ 0.52
LINC00543-201ENST00000567234 ST20Q9HBF5 79 aa18.31■□□□□ 0.52
LINC00543-201ENST00000567234 ASH1LQ9NR48 2969 aaKnown RBP18.31■□□□□ 0.52
LINC00543-201ENST00000567234 PSG1P11464 419 aa18.3■□□□□ 0.52
LINC00543-201ENST00000567234 PMCHP20382 165 aa18.3■□□□□ 0.52
LINC00543-201ENST00000567234 FXYD5Q96DB9 178 aa18.3■□□□□ 0.52
LINC00543-201ENST00000567234 THYN1Q9P016 225 aa18.3■□□□□ 0.52
LINC00543-201ENST00000567234 IGHV4-30-2A0A087WSY4 118 aa18.3■□□□□ 0.52
LINC00543-201ENST00000567234 IGKV1-17P01599 117 aa18.3■□□□□ 0.52
LINC00543-201ENST00000567234 SRIP30626 198 aa18.3■□□□□ 0.52
LINC00543-201ENST00000567234 CENPWQ5EE01 88 aa18.3■□□□□ 0.52
LINC00543-201ENST00000567234 OR4F17Q8NGA8 305 aa18.3■□□□□ 0.52
LINC00543-201ENST00000567234 FASNP49327 2511 aaKnown RBP18.29■□□□□ 0.52
LINC00543-201ENST00000567234 IGHV1-69DA0A0B4J2H0 117 aa18.29■□□□□ 0.52
LINC00543-201ENST00000567234 IGHV1-69P01742 117 aa18.29■□□□□ 0.52
LINC00543-201ENST00000567234 CRYBB3P26998 211 aa18.29■□□□□ 0.52
LINC00543-201ENST00000567234 FAM231DQ6ZW35 169 aa18.29■□□□□ 0.52
LINC00543-201ENST00000567234 HIGD1AQ9Y241 93 aa18.29■□□□□ 0.52
LINC00543-201ENST00000567234 VPS13CQ709C8 3753 aa18.29■□□□□ 0.52
LINC00543-201ENST00000567234 OR2J3O76001 311 aa18.28■□□□□ 0.52
LINC00543-201ENST00000567234 PYYP10082 97 aa18.28■□□□□ 0.52
LINC00543-201ENST00000567234 EGR2P11161 476 aaPredicted RBP18.28■□□□□ 0.52
LINC00543-201ENST00000567234 HNF1AP20823 631 aa18.28■□□□□ 0.52
LINC00543-201ENST00000567234 ZNF331Q9NQX6 463 aaPredicted RBP18.28■□□□□ 0.52
LINC00543-201ENST00000567234 MFAP4P55083 255 aa18.28■□□□□ 0.52
LINC00543-201ENST00000567234 ANKRD17O75179 2603 aaKnown RBP18.27■□□□□ 0.52
LINC00543-201ENST00000567234 CRXO43186 299 aaPredicted RBP18.27■□□□□ 0.52
LINC00543-201ENST00000567234 KLK9Q2XQG4 91 aa18.27■□□□□ 0.52
LINC00543-201ENST00000567234 RCHY1Q96PM5 261 aa18.27■□□□□ 0.52
LINC00543-201ENST00000567234 KLK9Q9UKQ9 250 aa18.27■□□□□ 0.52
LINC00543-201ENST00000567234 HINT1P49773 126 aaPredicted RBP18.26■□□□□ 0.51
LINC00543-201ENST00000567234 UBE2G1P62253 170 aa18.26■□□□□ 0.51
LINC00543-201ENST00000567234 UNQ5815/PRO19632Q6UWF5 114 aa18.26■□□□□ 0.51
LINC00543-201ENST00000567234 C18orf32Q8TCD1 76 aa18.26■□□□□ 0.51
LINC00543-201ENST00000567234 MSMBP08118 114 aa18.26■□□□□ 0.51
LINC00543-201ENST00000567234 LYZP61626 148 aa18.26■□□□□ 0.51
LINC00543-201ENST00000567234 KLF17Q5JT82 389 aaPredicted RBP18.26■□□□□ 0.51
LINC00543-201ENST00000567234 ATP5L2Q7Z4Y8 100 aa18.26■□□□□ 0.51
LINC00543-201ENST00000567234 MEGF9Q9H1U4 602 aa18.26■□□□□ 0.51
LINC00543-201ENST00000567234 FAM181BA6NEQ2 426 aa18.25■□□□□ 0.51
LINC00543-201ENST00000567234 MYCNOSP40205 109 aa18.25■□□□□ 0.51
LINC00543-201ENST00000567234 C12orf54Q6X4T0 127 aa18.25■□□□□ 0.51
LINC00543-201ENST00000567234 TMEM14CQ9P0S9 112 aa18.25■□□□□ 0.51
LINC00543-201ENST00000567234 HSBP1O75506 76 aa18.24■□□□□ 0.51
LINC00543-201ENST00000567234 GP9P14770 177 aa18.24■□□□□ 0.51
LINC00543-201ENST00000567234 SLC25A16P16260 332 aa18.24■□□□□ 0.51
LINC00543-201ENST00000567234 ZNF329Q86UD4 541 aa18.24■□□□□ 0.51
LINC00543-201ENST00000567234 FAM110DQ8TAY7 271 aaPredicted RBP18.24■□□□□ 0.51
LINC00543-201ENST00000567234 APCP25054 2843 aa18.24■□□□□ 0.51
LINC00543-201ENST00000567234 GNG7O60262 68 aa18.23■□□□□ 0.51
LINC00543-201ENST00000567234 NBEAP1P0C6P0 100 aa18.23■□□□□ 0.51
LINC00543-201ENST00000567234 IBA57Q5T440 356 aaKnown RBP18.23■□□□□ 0.51
LINC00543-201ENST00000567234 TMEM190Q8WZ59 177 aa18.23■□□□□ 0.51
LINC00543-201ENST00000567234 SLC25A39Q9BZJ4 359 aaPredicted RBP18.23■□□□□ 0.51
LINC00543-201ENST00000567234 FCGR2BP31994 310 aaPredicted RBP18.23■□□□□ 0.51
LINC00543-201ENST00000567234 S100A7AQ86SG5 101 aa18.23■□□□□ 0.51
LINC00543-201ENST00000567234 IGF2BP2-AS1Q96M15 143 aa18.23■□□□□ 0.51
LINC00543-201ENST00000567234 C21orf62Q9NYP8 219 aa18.23■□□□□ 0.51
LINC00543-201ENST00000567234 TRAV40A0A0B4J280 105 aa18.22■□□□□ 0.51
LINC00543-201ENST00000567234 B4DSR2 109 aa18.22■□□□□ 0.51
LINC00543-201ENST00000567234 SCGB2A1O75556 95 aa18.22■□□□□ 0.51
LINC00543-201ENST00000567234 WI2-2373I1.2A0A1W2PRP0 233 aa18.21■□□□□ 0.51
LINC00543-201ENST00000567234 GATA3P23771 443 aa18.21■□□□□ 0.51
LINC00543-201ENST00000567234 C5orf56Q8N8D9 126 aa18.21■□□□□ 0.51
LINC00543-201ENST00000567234 ZNF491Q8N8L2 437 aa18.21■□□□□ 0.51
LINC00543-201ENST00000567234 SMIM12Q96EX1 92 aa18.21■□□□□ 0.51
LINC00543-201ENST00000567234 K7ERU9 68 aa18.21■□□□□ 0.51
LINC00543-201ENST00000567234 VAMP3Q15836 100 aa18.21■□□□□ 0.51
LINC00543-201ENST00000567234 DEFB125Q8N687 156 aa18.21■□□□□ 0.51
LINC00543-201ENST00000567234 MBD6Q96DN6 1003 aa18.21■□□□□ 0.51
LINC00543-201ENST00000567234 SHANK2-AS3Q9BTD1 123 aa18.21■□□□□ 0.51
LINC00543-201ENST00000567234 SOX21Q9Y651 276 aaPredicted RBP18.21■□□□□ 0.51
LINC00543-201ENST00000567234 C2orf70A6NJV1 201 aa18.2■□□□□ 0.5
LINC00543-201ENST00000567234 F8W735 103 aaPredicted RBP18.2■□□□□ 0.5
LINC00543-201ENST00000567234 PEX7O00628 323 aa18.2■□□□□ 0.5
LINC00543-201ENST00000567234 IGLV2-8P01709 118 aa18.2■□□□□ 0.5
LINC00543-201ENST00000567234 OCIAD2Q56VL3 154 aa18.2■□□□□ 0.5
LINC00543-201ENST00000567234 RNF125Q96EQ8 232 aa18.2■□□□□ 0.5
LINC00543-201ENST00000567234 GRAMD2BQ96HH9 432 aa18.2■□□□□ 0.5
LINC00543-201ENST00000567234 TMEM70Q9BUB7 260 aa18.2■□□□□ 0.5
LINC00543-201ENST00000567234 RNF24Q9Y225 148 aa18.2■□□□□ 0.5
LINC00543-201ENST00000567234 MOB4Q9Y3A3 225 aa18.2■□□□□ 0.5
LINC00543-201ENST00000567234 MAP1AP78559 2803 aaPredicted RBP18.19■□□□□ 0.5
LINC00543-201ENST00000567234 H3BRN7 92 aa18.19■□□□□ 0.5
LINC00543-201ENST00000567234 M0R2Z0 102 aa18.19■□□□□ 0.5
LINC00543-201ENST00000567234 IGLL1P15814 213 aa18.19■□□□□ 0.5
LINC00543-201ENST00000567234 CHCHD1Q96BP2 118 aaKnown RBP18.19■□□□□ 0.5
LINC00543-201ENST00000567234 TMUB1Q9BVT8 246 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms