RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 ANXA3P12429 323 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 SRPXP78539 464 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 PSG3Q16557 428 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 SPANXN5Q5MJ07 72 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 TMED4Q7Z7H5 227 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 OR10J6PQ8NGY7 276 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 HIGD1AQ9Y241 93 aa10.67□□□□□ -0.7
PALB2-205ENST00000567003 MRPS16Q9Y3D3 137 aaKnown RBP10.67□□□□□ -0.7
PALB2-205ENST00000567003 CTDSPLO15194 276 aa10.66□□□□□ -0.7
PALB2-205ENST00000567003 SMIM18P0DKX4 95 aa10.66□□□□□ -0.7
PALB2-205ENST00000567003 CDKN1BP46527 198 aa10.66□□□□□ -0.7
PALB2-205ENST00000567003 SPCS2Q15005 226 aa10.66□□□□□ -0.7
PALB2-205ENST00000567003 ZNF493Q6ZR52 646 aa10.66□□□□□ -0.7
PALB2-205ENST00000567003 Q6ZRN7 208 aaPredicted RBP10.66□□□□□ -0.7
PALB2-205ENST00000567003 CYP2G1PQ6ZSU1 146 aa10.66□□□□□ -0.7
PALB2-205ENST00000567003 LINC00612Q8N6U2 182 aa10.66□□□□□ -0.7
PALB2-205ENST00000567003 RPUSD4Q96CM3 377 aaKnown RBP10.66□□□□□ -0.7
PALB2-205ENST00000567003 DIRAS2Q96HU8 199 aa10.66□□□□□ -0.7
PALB2-205ENST00000567003 SCGB3A2Q96PL1 93 aa10.66□□□□□ -0.7
PALB2-205ENST00000567003 A0A1W2PPQ1 181 aa10.65□□□□□ -0.7
PALB2-205ENST00000567003 J3KRW8 73 aa10.65□□□□□ -0.7
PALB2-205ENST00000567003 SYNGR2O43760 224 aa10.65□□□□□ -0.7
PALB2-205ENST00000567003 OR5G3P0C626 314 aa10.65□□□□□ -0.7
PALB2-205ENST00000567003 LINC00869P0C866 280 aa10.65□□□□□ -0.7
PALB2-205ENST00000567003 RPL7P18124 248 aaKnown RBP10.65□□□□□ -0.7
PALB2-205ENST00000567003 XGP55808 180 aa10.65□□□□□ -0.7
PALB2-205ENST00000567003 Q5VSD8 79 aa10.65□□□□□ -0.7
PALB2-205ENST00000567003 GFI1BQ5VTD9 330 aa10.65□□□□□ -0.7
PALB2-205ENST00000567003 LRRC20Q8TCA0 184 aa10.65□□□□□ -0.7
PALB2-205ENST00000567003 TMPRSS5Q9H3S3 457 aa10.65□□□□□ -0.7
PALB2-205ENST00000567003 SRRM2Q9UQ35 2752 aaKnown RBP10.64□□□□□ -0.71
PALB2-205ENST00000567003 A0A087X0K7 114 aa10.64□□□□□ -0.71
PALB2-205ENST00000567003 PRAC2D3DTV9 90 aa10.64□□□□□ -0.71
PALB2-205ENST00000567003 H7BYZ3 331 aa10.64□□□□□ -0.71
PALB2-205ENST00000567003 HYPMO75409 117 aa10.64□□□□□ -0.71
PALB2-205ENST00000567003 MED6O75586 246 aa10.64□□□□□ -0.71
PALB2-205ENST00000567003 IL5P05113 134 aa10.64□□□□□ -0.71
PALB2-205ENST00000567003 RAP2BP61225 183 aa10.64□□□□□ -0.71
PALB2-205ENST00000567003 LYPD1Q8N2G4 141 aa10.64□□□□□ -0.71
PALB2-205ENST00000567003 ZNF503Q96F45 646 aa10.64□□□□□ -0.71
PALB2-205ENST00000567003 CIB3Q96Q77 187 aaPredicted RBP10.64□□□□□ -0.71
PALB2-205ENST00000567003 DUXBA0A1W2PPF3 345 aa10.63□□□□□ -0.71
PALB2-205ENST00000567003 H3BTX0 84 aa10.63□□□□□ -0.71
PALB2-205ENST00000567003 CCNKO75909 580 aa10.63□□□□□ -0.71
PALB2-205ENST00000567003 RLN2P04090 185 aa10.63□□□□□ -0.71
PALB2-205ENST00000567003 HOXB5P09067 269 aa10.63□□□□□ -0.71
PALB2-205ENST00000567003 VAMP1P23763 118 aa10.63□□□□□ -0.71
PALB2-205ENST00000567003 S100A7P31151 101 aa10.63□□□□□ -0.71
PALB2-205ENST00000567003 RPP30P78346 268 aaKnown RBP10.63□□□□□ -0.71
PALB2-205ENST00000567003 PATE2Q6UY27 113 aa10.63□□□□□ -0.71
PALB2-205ENST00000567003 TNFRSF18Q9Y5U5 241 aa10.63□□□□□ -0.71
PALB2-205ENST00000567003 A0A096LPF7 62 aa10.62□□□□□ -0.71
PALB2-205ENST00000567003 PMS2P5A8MQ11 134 aa10.62□□□□□ -0.71
PALB2-205ENST00000567003 MRPS12O15235 138 aaKnown RBP10.62□□□□□ -0.71
PALB2-205ENST00000567003 SLC25A6P12236 298 aa10.62□□□□□ -0.71
PALB2-205ENST00000567003 RRAS2P62070 204 aaPredicted RBP10.62□□□□□ -0.71
PALB2-205ENST00000567003 Q6ZTI0 123 aa10.62□□□□□ -0.71
PALB2-205ENST00000567003 CCDC190Q86UF4 302 aa10.62□□□□□ -0.71
PALB2-205ENST00000567003 VSIG2Q96IQ7 327 aa10.62□□□□□ -0.71
PALB2-205ENST00000567003 RABL2BQ9UNT1 228 aa10.62□□□□□ -0.71
PALB2-205ENST00000567003 STRAPQ9Y3F4 350 aaKnown RBP10.62□□□□□ -0.71
PALB2-205ENST00000567003 SNURFLB1AK76 121 aa10.61□□□□□ -0.71
PALB2-205ENST00000567003 SLC17A3O00476 420 aa10.61□□□□□ -0.71
PALB2-205ENST00000567003 ADAP1O75689 374 aa10.61□□□□□ -0.71
PALB2-205ENST00000567003 DNAH10OSP0CZ25 163 aa10.61□□□□□ -0.71
PALB2-205ENST00000567003 KRTAP10-1P60331 282 aa10.61□□□□□ -0.71
PALB2-205ENST00000567003 CCDC28AQ8IWP9 274 aa10.61□□□□□ -0.71
PALB2-205ENST00000567003 ARL6Q9H0F7 186 aa10.61□□□□□ -0.71
PALB2-205ENST00000567003 LINC00854A0A1B0GVQ3 168 aa10.6□□□□□ -0.71
PALB2-205ENST00000567003 ANXA7P20073 488 aaKnown RBP10.6□□□□□ -0.71
PALB2-205ENST00000567003 PLP1P60201 277 aa10.6□□□□□ -0.71
PALB2-205ENST00000567003 SLC38A11Q08AI6 406 aa10.6□□□□□ -0.71
PALB2-205ENST00000567003 PPP1R1AQ13522 171 aa10.6□□□□□ -0.71
PALB2-205ENST00000567003 TMEM128Q5BJH2 165 aa10.6□□□□□ -0.71
PALB2-205ENST00000567003 LRTM2Q8N967 370 aa10.6□□□□□ -0.71
PALB2-205ENST00000567003 MDFICQ9P1T7 246 aa10.6□□□□□ -0.71
PALB2-205ENST00000567003 TRAV12-3A0A0B4J271 114 aa10.59□□□□□ -0.71
PALB2-205ENST00000567003 H3BNG1 76 aa10.59□□□□□ -0.71
PALB2-205ENST00000567003 SMR3BP02814 79 aaPredicted RBP10.59□□□□□ -0.71
PALB2-205ENST00000567003 POLR2GP62487 172 aaKnown RBP eCLIP10.59□□□□□ -0.71
PALB2-205ENST00000567003 HAMPP81172 84 aa10.59□□□□□ -0.71
PALB2-205ENST00000567003 C20orf144Q9BQM9 153 aa10.59□□□□□ -0.71
PALB2-205ENST00000567003 ARV1Q9H2C2 271 aa10.59□□□□□ -0.71
PALB2-205ENST00000567003 ZNF331Q9NQX6 463 aaPredicted RBP10.59□□□□□ -0.71
PALB2-205ENST00000567003 SIVA1O15304 175 aa10.58□□□□□ -0.72
PALB2-205ENST00000567003 NXPH4O95158 308 aa10.58□□□□□ -0.72
PALB2-205ENST00000567003 SFT2D2O95562 160 aa10.58□□□□□ -0.72
PALB2-205ENST00000567003 CT45A10P0DMU9 189 aa10.58□□□□□ -0.72
PALB2-205ENST00000567003 ERVFC1-1P60608 527 aa10.58□□□□□ -0.72
PALB2-205ENST00000567003 LCN15Q6UWW0 184 aa10.58□□□□□ -0.72
PALB2-205ENST00000567003 ZBTB8BQ8NAP8 495 aaPredicted RBP10.58□□□□□ -0.72
PALB2-205ENST00000567003 FRZBQ92765 325 aa10.58□□□□□ -0.72
PALB2-205ENST00000567003 PSENENQ9NZ42 101 aa10.58□□□□□ -0.72
PALB2-205ENST00000567003 RABL2AQ9UBK7 228 aaPredicted RBP10.58□□□□□ -0.72
PALB2-205ENST00000567003 RSL24D1Q9UHA3 163 aaKnown RBP10.58□□□□□ -0.72
PALB2-205ENST00000567003 SSSCA1O60232 199 aa10.57□□□□□ -0.72
PALB2-205ENST00000567003 MORN5Q5VZ52 161 aa10.57□□□□□ -0.72
PALB2-205ENST00000567003 DYNC2LI1Q8TCX1 351 aa10.57□□□□□ -0.72
PALB2-205ENST00000567003 SOSTQ9BQB4 213 aa10.57□□□□□ -0.72
PALB2-205ENST00000567003 SLC50A1Q9BRV3 221 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms