RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 C1orf194Q5T5A4 169 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 SLC25A34Q6PIV7 304 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 PATE2Q6UY27 113 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 FER1L6-AS1Q8NA97 138 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 FXYD7P58549 80 aa9.25□□□□□ -0.93
CDH1-210ENST00000566612 A0A1W2PS18 150 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 NDUFB8O95169 186 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 ERASQ7Z444 233 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 GLMPQ8WWB7 406 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 C17orf77Q96MU5 243 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 A8MWP6 167 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 M0R381 172 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 SAA4P35542 130 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 NDPQ00604 133 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 Q6ZWC4 215 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 POLR3KQ9Y2Y1 108 aaPredicted RBP9.24□□□□□ -0.93
CDH1-210ENST00000566612 SOX21Q9Y651 276 aaPredicted RBP9.24□□□□□ -0.93
CDH1-210ENST00000566612 TOMM40O96008 361 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 IGLC1P0CG04 106 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 RPS20P60866 119 aaKnown RBP9.24□□□□□ -0.93
CDH1-210ENST00000566612 MAP1LC3AQ9H492 121 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 M0R1W7 72 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 RAB9AP51151 201 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 ZNF562Q6V9R5 426 aa9.24□□□□□ -0.93
CDH1-210ENST00000566612 SETD2Q9BYW2 2564 aaPredicted RBP9.23□□□□□ -0.93
CDH1-210ENST00000566612 A6NNC1 897 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 DMRTC2Q8IXT2 367 aaPredicted RBP9.23□□□□□ -0.93
CDH1-210ENST00000566612 MYOZ3Q8TDC0 251 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 SHANK2-AS3Q9BTD1 123 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 DPF1Q92782 380 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 PHLDA3Q9Y5J5 127 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 DSCAMO60469 2012 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 MGAQ8IWI9 3026 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 NAV2Q8IVL1 2488 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 FABP5P3A8MUU1 101 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 G3V318 75 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 LYZL1Q6UWQ5 148 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 Q86TA4 180 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 ORMDL3Q8N138 153 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 C18orf32Q8TCD1 76 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 RCHY1Q96PM5 261 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 COL25A1Q9BXS0 654 aaPredicted RBP9.23□□□□□ -0.93
CDH1-210ENST00000566612 WNK1Q9H4A3 2382 aa9.23□□□□□ -0.93
CDH1-210ENST00000566612 NCR2O95944 276 aa9.22□□□□□ -0.93
CDH1-210ENST00000566612 ARMS2P0C7Q2 107 aa9.22□□□□□ -0.93
CDH1-210ENST00000566612 SRD5A1P18405 259 aa9.22□□□□□ -0.93
CDH1-210ENST00000566612 ATP5L2Q7Z4Y8 100 aa9.22□□□□□ -0.93
CDH1-210ENST00000566612 USP9XQ93008 2570 aaPredicted RBP9.22□□□□□ -0.93
CDH1-210ENST00000566612 EREGO14944 169 aa9.22□□□□□ -0.93
CDH1-210ENST00000566612 NUDT3O95989 172 aa9.22□□□□□ -0.93
CDH1-210ENST00000566612 VPS25Q9BRG1 176 aa9.22□□□□□ -0.93
CDH1-210ENST00000566612 Q0VG73 95 aa9.22□□□□□ -0.93
CDH1-210ENST00000566612 THAP8Q8NA92 274 aa9.22□□□□□ -0.93
CDH1-210ENST00000566612 FAM167A-AS1Q96KT0 104 aa9.22□□□□□ -0.93
CDH1-210ENST00000566612 LAMTOR2Q9Y2Q5 125 aa9.22□□□□□ -0.93
CDH1-210ENST00000566612 ZFYVE26Q68DK2 2539 aa9.21□□□□□ -0.93
CDH1-210ENST00000566612 FAM181BA6NEQ2 426 aa9.21□□□□□ -0.93
CDH1-210ENST00000566612 WFDC12Q8WWY7 111 aa9.21□□□□□ -0.93
CDH1-210ENST00000566612 PSG3Q16557 428 aa9.21□□□□□ -0.93
CDH1-210ENST00000566612 MINOS1Q5TGZ0 78 aa9.21□□□□□ -0.93
CDH1-210ENST00000566612 RUSC1-AS1Q66K80 236 aa9.21□□□□□ -0.93
CDH1-210ENST00000566612 MINOS1-NBL1R4GNA1 71 aa9.21□□□□□ -0.93
CDH1-210ENST00000566612 LOC102724200A0A096LPH7 203 aaPredicted RBP9.21□□□□□ -0.94
CDH1-210ENST00000566612 EVI2AP22794 236 aa9.21□□□□□ -0.94
CDH1-210ENST00000566612 FBLN7Q53RD9 439 aa9.21□□□□□ -0.94
CDH1-210ENST00000566612 UNQ6494/PRO21346Q6UXR6 183 aa9.21□□□□□ -0.94
CDH1-210ENST00000566612 TRBV19A0A075B6N1 114 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 TRAV9-2A0A087WT02 112 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 C7orf71A4D174 169 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 TGFAP01135 160 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 HIVEP3Q5T1R4 2406 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 PRSS46E5RG02 174 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 IGLV2-23P01705 113 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 Q6AWC8 147 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 RAB37Q96AX2 223 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 NBEAQ8NFP9 2946 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 ADAMTS20P59510 1910 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 SMIM27A0A1W2PRY6 76 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 D6R8Y8 96 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 NPFFO15130 113 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 ERCC8Q13216 396 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 FAM106AQ4KMX7 169 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 ZNF414Q96IQ9 312 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 C8orf49Q96NF6 230 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 YPEL4Q96NS1 127 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 SMKR1H3BMG3 65 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 ATP6V0E1O15342 81 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 TMEM97Q5BJF2 176 aa9.2□□□□□ -0.94
CDH1-210ENST00000566612 TRAV41A0A0B4J266 112 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 hDV102S1A0JD36 115 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 SH2D1AO60880 128 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 AMN1Q8IY45 258 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 RNF182Q8N6D2 247 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 TMEM208Q9BTX3 173 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 SONP18583 2426 aaKnown RBP9.19□□□□□ -0.94
CDH1-210ENST00000566612 COX6B1P14854 86 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 ID1P41134 155 aa9.19□□□□□ -0.94
CDH1-210ENST00000566612 COA6Q5JTJ3 125 aaKnown RBP9.19□□□□□ -0.94
CDH1-210ENST00000566612 FAM74A4Q5TZK3 123 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms