RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 JKAMPQ9P055 326 aa17.1■□□□□ 0.33
SPSB3-208ENST00000566339 ATRXP46100 2492 aa17.1■□□□□ 0.33
SPSB3-208ENST00000566339 ARF6P62330 175 aa17.1■□□□□ 0.33
SPSB3-208ENST00000566339 BSPH1Q075Z2 132 aa17.1■□□□□ 0.33
SPSB3-208ENST00000566339 LGALS9BQ3B8N2 356 aa17.1■□□□□ 0.33
SPSB3-208ENST00000566339 LGALS9CQ6DKI2 356 aa17.1■□□□□ 0.33
SPSB3-208ENST00000566339 Q6ZVH6 145 aa17.1■□□□□ 0.33
SPSB3-208ENST00000566339 PRSS3P2Q8NHM4 247 aa17.1■□□□□ 0.33
SPSB3-208ENST00000566339 ZNF785A8K8V0 405 aa17.09■□□□□ 0.33
SPSB3-208ENST00000566339 BUB1B-PAK6H3BSN5 160 aa17.09■□□□□ 0.33
SPSB3-208ENST00000566339 K7ENP7 123 aa17.09■□□□□ 0.33
SPSB3-208ENST00000566339 SIVA1O15304 175 aa17.09■□□□□ 0.33
SPSB3-208ENST00000566339 ZNF48Q96MX3 618 aaPredicted RBP17.09■□□□□ 0.33
SPSB3-208ENST00000566339 RAB1BQ9H0U4 201 aa17.09■□□□□ 0.33
SPSB3-208ENST00000566339 PLCE1Q9P212 2302 aa17.09■□□□□ 0.33
SPSB3-208ENST00000566339 MUC21A0A0G2JKD1 596 aa17.08■□□□□ 0.33
SPSB3-208ENST00000566339 MUC21A0A140T8X8 626 aa17.08■□□□□ 0.33
SPSB3-208ENST00000566339 IGKV1-17P01599 117 aa17.08■□□□□ 0.33
SPSB3-208ENST00000566339 ARMS2P0C7Q2 107 aa17.08■□□□□ 0.33
SPSB3-208ENST00000566339 PLGLAQ15195 96 aa17.08■□□□□ 0.33
SPSB3-208ENST00000566339 MUC21Q5SSG8 566 aa17.08■□□□□ 0.33
SPSB3-208ENST00000566339 EXOC3-AS1Q8N2X6 119 aa17.08■□□□□ 0.33
SPSB3-208ENST00000566339 BSNQ9UPA5 3926 aa17.08■□□□□ 0.32
SPSB3-208ENST00000566339 TRAV8-1A0A0A6YYK1 113 aa17.07■□□□□ 0.32
SPSB3-208ENST00000566339 CT45A10P0DMU9 189 aa17.07■□□□□ 0.32
SPSB3-208ENST00000566339 COTL1Q14019 142 aa17.07■□□□□ 0.32
SPSB3-208ENST00000566339 MRPS12O15235 138 aaKnown RBP17.07■□□□□ 0.32
SPSB3-208ENST00000566339 CD24P25063 80 aa17.07■□□□□ 0.32
SPSB3-208ENST00000566339 WI2-2373I1.2A0A1W2PRP0 233 aa17.06■□□□□ 0.32
SPSB3-208ENST00000566339 PRRG2O14669 202 aa17.06■□□□□ 0.32
SPSB3-208ENST00000566339 C2orf91Q6ZV80 131 aa17.06■□□□□ 0.32
SPSB3-208ENST00000566339 OR9G4Q8NGQ1 327 aa17.06■□□□□ 0.32
SPSB3-208ENST00000566339 DYNLRB1Q9NP97 96 aa17.06■□□□□ 0.32
SPSB3-208ENST00000566339 IGHV3-72A0A0B4J1Y9 119 aa17.05■□□□□ 0.32
SPSB3-208ENST00000566339 A0A0G2JNJ9 132 aa17.05■□□□□ 0.32
SPSB3-208ENST00000566339 H3BTX0 84 aa17.05■□□□□ 0.32
SPSB3-208ENST00000566339 APOBEC3AP31941 199 aaPredicted RBP17.05■□□□□ 0.32
SPSB3-208ENST00000566339 SRSF2Q01130 221 aaKnown RBP17.05■□□□□ 0.32
SPSB3-208ENST00000566339 ZNF414Q96IQ9 312 aa17.05■□□□□ 0.32
SPSB3-208ENST00000566339 CST9LQ9H4G1 147 aa17.05■□□□□ 0.32
SPSB3-208ENST00000566339 Q9UFV3 132 aa17.05■□□□□ 0.32
SPSB3-208ENST00000566339 K7EIM0 57 aa17.05■□□□□ 0.32
SPSB3-208ENST00000566339 CNTFRP26992 372 aa17.05■□□□□ 0.32
SPSB3-208ENST00000566339 TMEM97Q5BJF2 176 aa17.05■□□□□ 0.32
SPSB3-208ENST00000566339 LY6LH3BQJ8 138 aa17.04■□□□□ 0.32
SPSB3-208ENST00000566339 PRB1P04280 392 aa17.04■□□□□ 0.32
SPSB3-208ENST00000566339 PSG9Q00887 426 aa17.04■□□□□ 0.32
SPSB3-208ENST00000566339 LINC01559Q495D7 138 aa17.04■□□□□ 0.32
SPSB3-208ENST00000566339 FAM104BQ5XKR9 115 aa17.04■□□□□ 0.32
SPSB3-208ENST00000566339 ZNF491Q8N8L2 437 aa17.04■□□□□ 0.32
SPSB3-208ENST00000566339 RPEQ96AT9 228 aa17.04■□□□□ 0.32
SPSB3-208ENST00000566339 RNF125Q96EQ8 232 aa17.04■□□□□ 0.32
SPSB3-208ENST00000566339 AAMDCQ9H7C9 122 aa17.04■□□□□ 0.32
SPSB3-208ENST00000566339 CFAP46Q8IYW2 2715 aa17.03■□□□□ 0.32
SPSB3-208ENST00000566339 A6NDN8 102 aa17.03■□□□□ 0.32
SPSB3-208ENST00000566339 OR2T8A6NH00 312 aa17.03■□□□□ 0.32
SPSB3-208ENST00000566339 ZNF138P52744 262 aa17.03■□□□□ 0.32
SPSB3-208ENST00000566339 OCIAD2Q56VL3 154 aa17.03■□□□□ 0.32
SPSB3-208ENST00000566339 ORMDL3Q8N138 153 aa17.03■□□□□ 0.32
SPSB3-208ENST00000566339 PIFOQ8TCI5 191 aa17.03■□□□□ 0.32
SPSB3-208ENST00000566339 PRRC2CQ9Y520 2896 aaKnown RBP17.03■□□□□ 0.32
SPSB3-208ENST00000566339 IGHV3-21A0A0B4J1V1 117 aa17.02■□□□□ 0.32
SPSB3-208ENST00000566339 H3BRM9 83 aa17.02■□□□□ 0.32
SPSB3-208ENST00000566339 CSN3P07498 182 aa17.02■□□□□ 0.32
SPSB3-208ENST00000566339 S100A7P31151 101 aa17.02■□□□□ 0.32
SPSB3-208ENST00000566339 FBXL15Q9H469 300 aa17.02■□□□□ 0.32
SPSB3-208ENST00000566339 B9A039 149 aa17.02■□□□□ 0.31
SPSB3-208ENST00000566339 FGF6P10767 208 aa17.02■□□□□ 0.31
SPSB3-208ENST00000566339 CRIP1P50238 77 aa17.02■□□□□ 0.31
SPSB3-208ENST00000566339 C21orf62-AS1Q17RA5 79 aa17.02■□□□□ 0.31
SPSB3-208ENST00000566339 AMMECR1LQ6DCA0 310 aa17.02■□□□□ 0.31
SPSB3-208ENST00000566339 SMIM15Q7Z3B0 74 aa17.02■□□□□ 0.31
SPSB3-208ENST00000566339 LHFPL4Q7Z7J7 247 aa17.02■□□□□ 0.31
SPSB3-208ENST00000566339 BOD1L2Q8IYS8 172 aa17.02■□□□□ 0.31
SPSB3-208ENST00000566339 TMEM189A5PLL7 270 aa17.01■□□□□ 0.31
SPSB3-208ENST00000566339 K7ERU9 68 aa17.01■□□□□ 0.31
SPSB3-208ENST00000566339 OR4X2Q8NGF9 303 aa17.01■□□□□ 0.31
SPSB3-208ENST00000566339 FASNP49327 2511 aaKnown RBP17.01■□□□□ 0.31
SPSB3-208ENST00000566339 A0A087X0K7 114 aa17■□□□□ 0.31
SPSB3-208ENST00000566339 SHISA9B4DS77 424 aa17■□□□□ 0.31
SPSB3-208ENST00000566339 HBDP02042 147 aa17■□□□□ 0.31
SPSB3-208ENST00000566339 CEACAM3P40198 252 aa17■□□□□ 0.31
SPSB3-208ENST00000566339 HSD52Q0P140 79 aa17■□□□□ 0.31
SPSB3-208ENST00000566339 LY6DQ14210 128 aa17■□□□□ 0.31
SPSB3-208ENST00000566339 GTF2H5Q6ZYL4 71 aa17■□□□□ 0.31
SPSB3-208ENST00000566339 IGFBPL1Q8WX77 278 aa17■□□□□ 0.31
SPSB3-208ENST00000566339 PRELID3AQ96N28 172 aa17■□□□□ 0.31
SPSB3-208ENST00000566339 NPBQ8NG41 125 aa17■□□□□ 0.31
SPSB3-208ENST00000566339 SIGLEC8Q9NYZ4 499 aa17■□□□□ 0.31
SPSB3-208ENST00000566339 A0A096LNJ9 63 aa16.99■□□□□ 0.31
SPSB3-208ENST00000566339 C7orf71A4D174 169 aa16.99■□□□□ 0.31
SPSB3-208ENST00000566339 CBY3A6NI87 242 aa16.99■□□□□ 0.31
SPSB3-208ENST00000566339 SCGB2A1O75556 95 aa16.99■□□□□ 0.31
SPSB3-208ENST00000566339 BMI1P35226 326 aa16.99■□□□□ 0.31
SPSB3-208ENST00000566339 LINC01546A6NGU7 62 aa16.98■□□□□ 0.31
SPSB3-208ENST00000566339 NDUFA3O95167 84 aa16.98■□□□□ 0.31
SPSB3-208ENST00000566339 NPIPB5A8MRT5 1133 aa16.97■□□□□ 0.31
SPSB3-208ENST00000566339 E7EQL1 145 aa16.97■□□□□ 0.31
SPSB3-208ENST00000566339 IFI27P40305 119 aaPredicted RBP16.97■□□□□ 0.31
SPSB3-208ENST00000566339 PAX8Q06710 450 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms