RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 COL6A3P12111 3177 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 THBS3P49746 956 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 TFF3Q07654 80 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 Q0VG73 95 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 FOXF2Q12947 444 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 Q6ZN92 141 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 Q6ZWC4 215 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 SDK1Q7Z5N4 2213 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 WDR86Q86TI4 376 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 MDP1Q86V88 176 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 PRIMA1Q86XR5 153 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 C11orf53Q8IXP5 236 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 KMT2EQ8IZD2 1858 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 TMEM256Q8N2U0 113 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 DRAM1Q8N682 238 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 OR10P1Q8NGE3 313 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 ZNF502Q8TBZ5 544 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 STARD4Q96DR4 205 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 HES7Q9BYE0 225 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 IL36BQ9NZH7 164 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 TP53TG3Q9ULZ0 132 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 LY96Q9Y6Y9 160 aa4.08□□□□□ -1.76
CAPN3-214ENST00000565274 CNTRLQ7Z7A1 2325 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 TRGV5A0A0B4J1U4 118 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 A0A1W2PNU3 283 aaPredicted RBP4.07□□□□□ -1.76
CAPN3-214ENST00000565274 NCBP2LA6PVI3 153 aaKnown RBP4.07□□□□□ -1.76
CAPN3-214ENST00000565274 C9JCJ5 164 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 J3QQQ9 107 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 NUPR1O60356 82 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 SERF1AO75920 110 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 IGKV3-15P01624 115 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 IGLV1-44P01699 117 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 IGHV3-9P01782 118 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 IGHG2P01859 326 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 MT-ND6P03923 174 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 MYOD1P15172 320 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 CRISP2P16562 243 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 CA6P23280 308 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 ATP5G3P48201 142 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 BRWD1-AS2P59051 145 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 MRPL54Q6P161 138 aaKnown RBP4.07□□□□□ -1.76
CAPN3-214ENST00000565274 MMD2Q8IY49 270 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 Q8N7P7 452 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 ZNF709Q8N972 641 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 Q8N976 141 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 OR10G8Q8NGN5 311 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 SGMS2Q8NHU3 365 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 C11orf52Q96A22 123 aa4.07□□□□□ -1.76
CAPN3-214ENST00000565274 CHD3Q12873 2000 aaKnown RBP4.06□□□□□ -1.76
CAPN3-214ENST00000565274 TRAV26-2A0A0B4J265 109 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 FAM240AA0A1B0GVK7 77 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 A6NDN8 102 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 C15orf62A8K5M9 175 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 C12orf77C9JDV5 145 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 MRPS12O15235 138 aaKnown RBP4.06□□□□□ -1.76
CAPN3-214ENST00000565274 NDUFC2O95298 119 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 CGB3P0DN86 165 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 CGB7P0DN87 165 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 FGF6P10767 208 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 IFITM1P13164 125 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 CRYBB3P26998 211 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 OPRK1P41145 380 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 KIR2DS2P43631 304 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 NMUP48645 174 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 APOC4P55056 127 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 PLGLB1Q02325 96 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 RPL18AQ02543 176 aaKnown RBP4.06□□□□□ -1.76
CAPN3-214ENST00000565274 FOXI1Q12951 378 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 TMEM30BQ3MIR4 351 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 ZNF718Q3SXZ3 478 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 FAM201AQ5SY85 155 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 ACP7Q6ZNF0 438 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 TCF23Q7RTU1 214 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 COX8CQ7Z4L0 72 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 MRPL55Q7Z7F7 128 aaKnown RBP4.06□□□□□ -1.76
CAPN3-214ENST00000565274 ATOH7Q8N100 152 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 CIARTQ8N365 385 aaPredicted RBP4.06□□□□□ -1.76
CAPN3-214ENST00000565274 KLHDC1Q8N7A1 406 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 ZNF114Q8NC26 417 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 OR4F17Q8NGA8 305 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 OSR1Q8TAX0 266 aaPredicted RBP4.06□□□□□ -1.76
CAPN3-214ENST00000565274 FMC1Q96HJ9 113 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 KCNS1Q96KK3 526 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 TMEM204Q9BSN7 226 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 LINC00574Q9H8X3 128 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 ARL2-SNX15V9GYD0 113 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 TECTAO75443 2155 aa4.06□□□□□ -1.76
CAPN3-214ENST00000565274 NCKAP5O14513 1909 aa4.05□□□□□ -1.76
CAPN3-214ENST00000565274 DOCK10Q96BY6 2186 aa4.05□□□□□ -1.76
CAPN3-214ENST00000565274 TRBV20OR9-2A0A075B6H5 130 aa4.05□□□□□ -1.76
CAPN3-214ENST00000565274 GRIFINA4D1Z8 144 aa4.05□□□□□ -1.76
CAPN3-214ENST00000565274 SNURFLB1AK76 121 aa4.05□□□□□ -1.76
CAPN3-214ENST00000565274 SHISA9B4DS77 424 aa4.05□□□□□ -1.76
CAPN3-214ENST00000565274 BUB3O43684 328 aa4.05□□□□□ -1.76
CAPN3-214ENST00000565274 IGHV1-2P23083 117 aa4.05□□□□□ -1.76
CAPN3-214ENST00000565274 CBLN1P23435 193 aa4.05□□□□□ -1.76
CAPN3-214ENST00000565274 VDAC2P45880 294 aaPredicted RBP4.05□□□□□ -1.76
CAPN3-214ENST00000565274 RPL30P62888 115 aaKnown RBP4.05□□□□□ -1.76
CAPN3-214ENST00000565274 HERVK_113P63121 156 aa4.05□□□□□ -1.76
CAPN3-214ENST00000565274 ZNF90Q03938 601 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms