RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 FMC1Q96HJ9 113 aa15.02□□□□□ -0.01
CLN6-205ENST00000564846 RPH3ALQ9UNE2 315 aa15.02□□□□□ -0.01
CLN6-205ENST00000564846 ISLRO14498 428 aa15.01□□□□□ -0.01
CLN6-205ENST00000564846 ZNF207O43670 478 aaKnown RBP15.01□□□□□ -0.01
CLN6-205ENST00000564846 UBE2E2Q96LR5 201 aa15.01□□□□□ -0.01
CLN6-205ENST00000564846 OR5B12Q96R08 314 aa15.01□□□□□ -0.01
CLN6-205ENST00000564846 ESM1Q9NQ30 184 aa15.01□□□□□ -0.01
CLN6-205ENST00000564846 URGCP-MRPS24S4R325 110 aa15.01□□□□□ -0.01
CLN6-205ENST00000564846 TRAV34A0A0B4J273 112 aa15.01□□□□□ -0.01
CLN6-205ENST00000564846 IGLV2-8P01709 118 aa15.01□□□□□ -0.01
CLN6-205ENST00000564846 APOHP02749 345 aaPredicted RBP15.01□□□□□ -0.01
CLN6-205ENST00000564846 BAGE2Q86Y30 109 aa15.01□□□□□ -0.01
CLN6-205ENST00000564846 SMIM12Q96EX1 92 aa15.01□□□□□ -0.01
CLN6-205ENST00000564846 ZNF785A8K8V0 405 aa15□□□□□ -0.01
CLN6-205ENST00000564846 GCGP01275 180 aa15□□□□□ -0.01
CLN6-205ENST00000564846 SRD5A1P18405 259 aa15□□□□□ -0.01
CLN6-205ENST00000564846 MEOX2P50222 304 aa15□□□□□ -0.01
CLN6-205ENST00000564846 ARL6IP6Q8N6S5 226 aa15□□□□□ -0.01
CLN6-205ENST00000564846 OR10G8Q8NGN5 311 aa15□□□□□ -0.01
CLN6-205ENST00000564846 SMR3AQ99954 134 aa15□□□□□ -0.01
CLN6-205ENST00000564846 SONP18583 2426 aaKnown RBP15□□□□□ -0.01
CLN6-205ENST00000564846 IGHV3-66A0A0C4DH42 116 aa14.99□□□□□ -0.01
CLN6-205ENST00000564846 LY6G6DO95868 133 aa14.99□□□□□ -0.01
CLN6-205ENST00000564846 LGALS1P09382 135 aaKnown RBP14.99□□□□□ -0.01
CLN6-205ENST00000564846 S100PP25815 95 aa14.99□□□□□ -0.01
CLN6-205ENST00000564846 FAM106AQ4KMX7 169 aa14.99□□□□□ -0.01
CLN6-205ENST00000564846 Q6ZSV7 163 aa14.99□□□□□ -0.01
CLN6-205ENST00000564846 GPHB5Q86YW7 130 aa14.99□□□□□ -0.01
CLN6-205ENST00000564846 MYO9AB2RTY4 2548 aa14.99□□□□□ -0.01
CLN6-205ENST00000564846 ACANP16112 2415 aa14.99□□□□□ -0.01
CLN6-205ENST00000564846 A0A1W2PS18 150 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 ZNF320A2RRD8 509 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 K7EQM0 130 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 RNASE1P07998 156 aaKnown RBP14.98□□□□□ -0.01
CLN6-205ENST00000564846 RAB5AP20339 215 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 CSN1S1P47710 185 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 C16orf54Q6UWD8 224 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 GOLT1AQ6ZVE7 132 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 KLHDC1Q8N7A1 406 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 ZNF418Q8TF45 676 aaPredicted RBP14.98□□□□□ -0.01
CLN6-205ENST00000564846 IGHV3OR16-13A0A075B7E8 117 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 IGHV3-49A0A0A0MS15 119 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 IGHV3-74A0A0B4J1X5 117 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 SERTM2A0A1B0GWG4 89 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 FOLR2P14207 255 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 ERVFC1-1P60608 527 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 GRAMD2BQ96HH9 432 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 IMMP2LQ96T52 175 aa14.98□□□□□ -0.01
CLN6-205ENST00000564846 ZNF331Q9NQX6 463 aaPredicted RBP14.98□□□□□ -0.01
CLN6-205ENST00000564846 DAZ1Q9NQZ3 744 aaKnown RBP14.98□□□□□ -0.01
CLN6-205ENST00000564846 TRBV6-1A0A0K0K1D8 114 aa14.97□□□□□ -0.01
CLN6-205ENST00000564846 K7EMT4 169 aa14.97□□□□□ -0.01
CLN6-205ENST00000564846 CRYBA1P05813 215 aa14.97□□□□□ -0.01
CLN6-205ENST00000564846 PFN1P07737 140 aaKnown RBP14.97□□□□□ -0.01
CLN6-205ENST00000564846 MGST1P10620 155 aaKnown RBP14.97□□□□□ -0.01
CLN6-205ENST00000564846 TMEM75Q8N9X5 138 aa14.97□□□□□ -0.01
CLN6-205ENST00000564846 GLMPQ8WWB7 406 aa14.97□□□□□ -0.01
CLN6-205ENST00000564846 SLC50A1Q9BRV3 221 aa14.97□□□□□ -0.01
CLN6-205ENST00000564846 DIRC3C9JPN6 131 aa14.96□□□□□ -0.01
CLN6-205ENST00000564846 LTAP01374 205 aa14.96□□□□□ -0.01
CLN6-205ENST00000564846 OR5I1Q13606 314 aa14.96□□□□□ -0.01
CLN6-205ENST00000564846 RPEL1Q2QD12 228 aa14.96□□□□□ -0.01
CLN6-205ENST00000564846 KCNIP4Q6PIL6 250 aa14.96□□□□□ -0.01
CLN6-205ENST00000564846 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.96□□□□□ -0.01
CLN6-205ENST00000564846 OSTCQ9NRP0 149 aa14.96□□□□□ -0.01
CLN6-205ENST00000564846 ANK3Q12955 4377 aaKnown RBP14.96□□□□□ -0.01
CLN6-205ENST00000564846 TRBV24-1A0A075B6N3 115 aa14.96□□□□□ -0.02
CLN6-205ENST00000564846 M0R3E3 92 aa14.96□□□□□ -0.02
CLN6-205ENST00000564846 CXCL1P09341 107 aa14.96□□□□□ -0.02
CLN6-205ENST00000564846 SGK494Q96LW2 274 aa14.96□□□□□ -0.02
CLN6-205ENST00000564846 TGIF2-C20orf24A0A0A6YYL0 155 aa14.95□□□□□ -0.02
CLN6-205ENST00000564846 IGLV2-11P01706 119 aa14.95□□□□□ -0.02
CLN6-205ENST00000564846 HILS1P60008 231 aa14.95□□□□□ -0.02
CLN6-205ENST00000564846 NHLRC2Q8NBF2 726 aa14.95□□□□□ -0.02
CLN6-205ENST00000564846 MLST8Q9BVC4 326 aa14.95□□□□□ -0.02
CLN6-205ENST00000564846 UFC1Q9Y3C8 167 aa14.95□□□□□ -0.02
CLN6-205ENST00000564846 NOTCH2Q04721 2471 aa14.95□□□□□ -0.02
CLN6-205ENST00000564846 IGHV7-4-1A0A0J9YVY3 117 aa14.94□□□□□ -0.02
CLN6-205ENST00000564846 PSG3Q16557 428 aa14.94□□□□□ -0.02
CLN6-205ENST00000564846 Q86TA4 180 aa14.94□□□□□ -0.02
CLN6-205ENST00000564846 BIN3Q9NQY0 253 aa14.94□□□□□ -0.02
CLN6-205ENST00000564846 FOSL1P15407 271 aa14.93□□□□□ -0.02
CLN6-205ENST00000564846 FOXL1Q12952 345 aa14.93□□□□□ -0.02
CLN6-205ENST00000564846 IBA57Q5T440 356 aaKnown RBP14.93□□□□□ -0.02
CLN6-205ENST00000564846 FAM231DQ6ZW35 169 aa14.93□□□□□ -0.02
CLN6-205ENST00000564846 FAM210BQ96KR6 192 aa14.93□□□□□ -0.02
CLN6-205ENST00000564846 PYGO2Q9BRQ0 406 aa14.93□□□□□ -0.02
CLN6-205ENST00000564846 TRAV8-1A0A0A6YYK1 113 aa14.93□□□□□ -0.02
CLN6-205ENST00000564846 FBLL1A6NHQ2 334 aaKnown RBP14.93□□□□□ -0.02
CLN6-205ENST00000564846 CDX1P47902 265 aaPredicted RBP14.93□□□□□ -0.02
CLN6-205ENST00000564846 FLI1Q01543 452 aaPredicted RBP14.93□□□□□ -0.02
CLN6-205ENST00000564846 TMEM183AQ8IXX5 376 aa14.93□□□□□ -0.02
CLN6-205ENST00000564846 JMJD8Q96S16 334 aa14.93□□□□□ -0.02
CLN6-205ENST00000564846 RNASE7Q9H1E1 156 aaKnown RBP14.93□□□□□ -0.02
CLN6-205ENST00000564846 V9GYV3 84 aa14.93□□□□□ -0.02
CLN6-205ENST00000564846 TM4SF20Q53R12 229 aa14.92□□□□□ -0.02
CLN6-205ENST00000564846 C8orf86Q6ZUL3 223 aa14.92□□□□□ -0.02
CLN6-205ENST00000564846 PRNTQ86SH4 94 aa14.92□□□□□ -0.02
CLN6-205ENST00000564846 RHPN1-AS1Q9BWJ2 59 aa14.92□□□□□ -0.02
CLN6-205ENST00000564846 CLEC5AQ9NY25 188 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms