RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 FAM157AC9JC47 383 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 SIVA1O15304 175 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 ZNF660Q6AZW8 331 aaPredicted RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 ZNF474Q6S9Z5 364 aaPredicted RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 Q6ZRM9 215 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 LYG1Q8N1E2 194 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 OR11H6Q8NGC7 330 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 NEU1Q99519 415 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 NPCDR1Q9BY65 106 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 SRD5A3Q9H8P0 318 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 OR51B2Q9Y5P1 312 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 CCL21O00585 134 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 NCR2O95944 276 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 COL10A1Q03692 680 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 C10orf126Q8N4M7 172 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 FAM216BQ8N7L0 139 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 GPR146Q96CH1 333 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 HELZ2Q9BYK8 2649 aaKnown RBP2.75□□□□□ -1.97
CHD9-213ENST00000564845 TNFRSF18Q9Y5U5 241 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 EXPH5Q8NEV8 1989 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 DSCAMO60469 2012 aa2.75□□□□□ -1.97
CHD9-213ENST00000564845 CRLF1O75462 422 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 PRSS57Q6UWY2 283 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 SPRY4Q9C004 299 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 IGHV1-69DA0A0B4J2H0 117 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 IGHV1-18A0A0C4DH31 117 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 MBD3L4A6NDZ8 208 aaPredicted RBP2.74□□□□□ -1.97
CHD9-213ENST00000564845 MBD3L3A6NE82 208 aaPredicted RBP2.74□□□□□ -1.97
CHD9-213ENST00000564845 MBD3L5A6NJ08 208 aaPredicted RBP2.74□□□□□ -1.97
CHD9-213ENST00000564845 SRRM5B3KS81 715 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 OR9G9P0C7N8 305 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 UBE2BP63146 152 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 MBD3L2Q8NHZ7 208 aaPredicted RBP2.74□□□□□ -1.97
CHD9-213ENST00000564845 MRPL53Q96EL3 112 aaKnown RBP2.74□□□□□ -1.97
CHD9-213ENST00000564845 WFDC1Q9HC57 220 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 TRBV6-7A0A0A0MS04 114 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 PEAR1Q5VY43 1037 aaPredicted RBP2.74□□□□□ -1.97
CHD9-213ENST00000564845 AJUBAQ96IF1 538 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 FOXA2Q9Y261 457 aaPredicted RBP2.74□□□□□ -1.97
CHD9-213ENST00000564845 LINC01548A6NM66 108 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 CECR9P0C854 216 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 EVI2AP22794 236 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 ATP6V0CP27449 155 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 HERV-K104P63124 156 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 RPL36AP83881 106 aaKnown RBP2.74□□□□□ -1.97
CHD9-213ENST00000564845 LCNL1Q6ZST4 164 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 RPL36ALQ969Q0 106 aaKnown RBP2.74□□□□□ -1.97
CHD9-213ENST00000564845 LINC00474Q9P2X8 69 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 DMRT1Q9Y5R6 373 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 E7EUB6 86 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 F8WEM9 126 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 TMEM75Q8N9X5 138 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 TMEM14CQ9P0S9 112 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 MED13LQ71F56 2210 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 TRAV24A0A0B4J272 114 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 HAX1O00165 279 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 TMEM50AO95807 157 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 ZNF134P52741 427 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 C10orf55Q5SWW7 151 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 Q6ZSR3 168 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 TPPP3Q9BW30 176 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 CEACAM4O75871 244 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 WNT10AQ9GZT5 417 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 CARHSP1Q9Y2V2 147 aaKnown RBP2.74□□□□□ -1.97
CHD9-213ENST00000564845 USP9YO00507 2555 aaPredicted RBP2.74□□□□□ -1.97
CHD9-213ENST00000564845 A0A0G2JNJ9 132 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 GFRA3O60609 400 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 IER3P46695 156 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 KLRD1Q13241 179 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 TAL2Q16559 108 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 C9orf152Q5JTZ5 239 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 ABHD12Q8N2K0 398 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 CD177Q8N6Q3 437 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 ZNF114Q8NC26 417 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 C5orf30Q96GV9 206 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 ODF3Q96PU9 254 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 SCRT1Q9BWW7 348 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 ZMAT4Q9H898 229 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 Q9UFV3 132 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 KLF12Q9Y4X4 402 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 FABP5P3A8MUU1 101 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 CXCL1P09341 107 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 GNB1P62873 340 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 SAMD5Q5TGI4 173 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 PPP1R27Q86WC6 154 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 Q96M66 194 aa2.74□□□□□ -1.97
CHD9-213ENST00000564845 TCRBV4S1A1TA0A5B7 111 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 APCSP02743 223 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 MED14OSP0DP75 135 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 HLA-DRB4P13762 266 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 TRGV9Q99603 122 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 TM2D2Q9BX73 214 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 CLCF1Q9UBD9 225 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 HLA-DRB4X5D2U9 266 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 APC2O95996 2303 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 IGHV3OR16-13A0A075B7E8 117 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 IGHV3-74A0A0B4J1X5 117 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 MUC21A0A0G2JKD1 596 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 MUC21A0A140T8X8 626 aa2.73□□□□□ -1.97
CHD9-213ENST00000564845 SSBP2P81877 361 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms