RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 STXBP6Q8NFX7 210 aa16.3■□□□□ 0.2
MAP1LC3B-206ENST00000564844 RALYQ9UKM9 306 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-206ENST00000564844 TMEM265A0A087WTH1 108 aa16.29■□□□□ 0.2
MAP1LC3B-206ENST00000564844 IGHG3P01860 377 aa16.29■□□□□ 0.2
MAP1LC3B-206ENST00000564844 MS4A6AQ9H2W1 248 aa16.29■□□□□ 0.2
MAP1LC3B-206ENST00000564844 LINC00312Q9Y6C7 94 aa16.29■□□□□ 0.2
MAP1LC3B-206ENST00000564844 IGHV3OR16-8A0A075B7F1 116 aa16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 A0A0G2JLM5 398 aa16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 IGLV2-11P01706 119 aa16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 VMA21Q3ZAQ7 101 aa16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 IGFL4Q6B9Z1 124 aa16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 OR1N2Q8NGR9 330 aa16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 WFDC12Q8WWY7 111 aa16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 MEF2CQ06413 473 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 TMEM95Q3KNT9 176 aa16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 KLF17Q5JT82 389 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 TIMM23BQ5SRD1 257 aa16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 OR4A5Q8NH83 315 aa16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 SLC25A39Q9BZJ4 359 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 TMEM133Q9H2Q1 129 aa16.28■□□□□ 0.2
MAP1LC3B-206ENST00000564844 A0A096LNJ9 63 aa16.27■□□□□ 0.2
MAP1LC3B-206ENST00000564844 HAX1O00165 279 aa16.27■□□□□ 0.2
MAP1LC3B-206ENST00000564844 RPL27AP46776 148 aaKnown RBP16.27■□□□□ 0.2
MAP1LC3B-206ENST00000564844 CRIP1P50238 77 aa16.27■□□□□ 0.2
MAP1LC3B-206ENST00000564844 FBXL15Q9H469 300 aa16.27■□□□□ 0.2
MAP1LC3B-206ENST00000564844 SIGLEC8Q9NYZ4 499 aa16.27■□□□□ 0.2
MAP1LC3B-206ENST00000564844 ATP5IP56385 69 aaPredicted RBP16.27■□□□□ 0.2
MAP1LC3B-206ENST00000564844 VSTM2AQ8TAG5 236 aa16.27■□□□□ 0.2
MAP1LC3B-206ENST00000564844 TNFRSF14Q92956 283 aa16.27■□□□□ 0.2
MAP1LC3B-206ENST00000564844 DKK2Q9UBU2 259 aa16.27■□□□□ 0.2
MAP1LC3B-206ENST00000564844 OR2K2Q8NGT1 345 aa16.27■□□□□ 0.19
MAP1LC3B-206ENST00000564844 C8orf46Q8TAG6 207 aa16.27■□□□□ 0.19
MAP1LC3B-206ENST00000564844 K7ERJ3 54 aa16.26■□□□□ 0.19
MAP1LC3B-206ENST00000564844 RIGQ13278 110 aa16.26■□□□□ 0.19
MAP1LC3B-206ENST00000564844 PLGLAQ15195 96 aa16.26■□□□□ 0.19
MAP1LC3B-206ENST00000564844 LYZL1Q6UWQ5 148 aa16.26■□□□□ 0.19
MAP1LC3B-206ENST00000564844 COL27A1Q8IZC6 1860 aaPredicted RBP16.26■□□□□ 0.19
MAP1LC3B-206ENST00000564844 GCSHP23434 173 aa16.25■□□□□ 0.19
MAP1LC3B-206ENST00000564844 GTF2H5Q6ZYL4 71 aa16.25■□□□□ 0.19
MAP1LC3B-206ENST00000564844 ZNF492Q9P255 531 aa16.25■□□□□ 0.19
MAP1LC3B-206ENST00000564844 A1L4Q6 167 aa16.25■□□□□ 0.19
MAP1LC3B-206ENST00000564844 GNG7O60262 68 aa16.25■□□□□ 0.19
MAP1LC3B-206ENST00000564844 FGF6P10767 208 aa16.25■□□□□ 0.19
MAP1LC3B-206ENST00000564844 SPCS1Q9Y6A9 102 aa16.25■□□□□ 0.19
MAP1LC3B-206ENST00000564844 TM4SF5O14894 197 aa16.25■□□□□ 0.19
MAP1LC3B-206ENST00000564844 MTURNQ8N3F0 131 aa16.25■□□□□ 0.19
MAP1LC3B-206ENST00000564844 PRELID3AQ96N28 172 aa16.25■□□□□ 0.19
MAP1LC3B-206ENST00000564844 C9orf118A6NHY6 69 aa16.24■□□□□ 0.19
MAP1LC3B-206ENST00000564844 COX7A1P24310 79 aa16.24■□□□□ 0.19
MAP1LC3B-206ENST00000564844 MRGPRG-AS1Q2M3A8 158 aa16.24■□□□□ 0.19
MAP1LC3B-206ENST00000564844 CT83Q5H943 113 aa16.24■□□□□ 0.19
MAP1LC3B-206ENST00000564844 PSG8Q9UQ74 426 aa16.24■□□□□ 0.19
MAP1LC3B-206ENST00000564844 SOX21Q9Y651 276 aaPredicted RBP16.24■□□□□ 0.19
MAP1LC3B-206ENST00000564844 IGLV3-9A0A075B6K5 115 aa16.24■□□□□ 0.19
MAP1LC3B-206ENST00000564844 IGHV3-35A0A0C4DH35 117 aa16.24■□□□□ 0.19
MAP1LC3B-206ENST00000564844 GAS8-AS1O95177 125 aa16.24■□□□□ 0.19
MAP1LC3B-206ENST00000564844 FCGR2BP31994 310 aaPredicted RBP16.24■□□□□ 0.19
MAP1LC3B-206ENST00000564844 RASL11BQ9BPW5 248 aa16.24■□□□□ 0.19
MAP1LC3B-206ENST00000564844 TRAV17A0A0B4J275 112 aa16.23■□□□□ 0.19
MAP1LC3B-206ENST00000564844 LYNX1G3V0Z9 82 aa16.23■□□□□ 0.19
MAP1LC3B-206ENST00000564844 LYNX1P0DP58 116 aa16.23■□□□□ 0.19
MAP1LC3B-206ENST00000564844 K7EM74 188 aa16.23■□□□□ 0.19
MAP1LC3B-206ENST00000564844 GFRA4Q9GZZ7 299 aa16.23■□□□□ 0.19
MAP1LC3B-206ENST00000564844 A6NDN8 102 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 OVOL3O00110 214 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 PPIFP30405 207 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 TRGV9Q99603 122 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 ANKHD1Q8IWZ3 2542 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 TMEM75Q8N9X5 138 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 Q8TAT8 98 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 OTORQ9NRC9 128 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 INSIG2Q9Y5U4 225 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 IGHV3-23P01764 117 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 SEC11AP67812 179 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 PAX2Q02962 417 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 PRSS33Q8NF86 280 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 SMIM12Q96EX1 92 aa16.22■□□□□ 0.19
MAP1LC3B-206ENST00000564844 NPIPB6E9PJ23 425 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 CD40P25942 277 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 GATA4P43694 442 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 PLP1P60201 277 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 ZNF414Q96IQ9 312 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 MSRB1Q9NZV6 116 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 CTSZQ9UBR2 303 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 AGRNO00468 2067 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 NDUFS8O00217 210 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 NDUFB3O43676 98 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 CNIH1O95406 144 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 UFSP1Q6NVU6 142 aa16.21■□□□□ 0.19
MAP1LC3B-206ENST00000564844 EVI2AP22794 236 aa16.2■□□□□ 0.18
MAP1LC3B-206ENST00000564844 IGF2RP11717 2491 aa16.2■□□□□ 0.18
MAP1LC3B-206ENST00000564844 IGKV2-40A0A087WW87 121 aaPredicted RBP16.2■□□□□ 0.18
MAP1LC3B-206ENST00000564844 SMAD7O15105 426 aaKnown RBP16.2■□□□□ 0.18
MAP1LC3B-206ENST00000564844 IGKV2D-40P01614 121 aaPredicted RBP16.2■□□□□ 0.18
MAP1LC3B-206ENST00000564844 IL4P05112 153 aa16.2■□□□□ 0.18
MAP1LC3B-206ENST00000564844 TWIST1Q15672 202 aa16.2■□□□□ 0.18
MAP1LC3B-206ENST00000564844 GTSF1LQ9H1H1 148 aa16.2■□□□□ 0.18
MAP1LC3B-206ENST00000564844 PPIAL4EA0A075B759 164 aa16.2■□□□□ 0.18
MAP1LC3B-206ENST00000564844 PPIAL4FP0DN26 164 aa16.2■□□□□ 0.18
MAP1LC3B-206ENST00000564844 CKS2P33552 79 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms