RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 BIN3Q9NQY0 253 aa11.98□□□□□ -0.49
COMMD4-210ENST00000564587 CLEC5AQ9NY25 188 aa11.98□□□□□ -0.49
COMMD4-210ENST00000564587 TRBV20OR9-2A0A075B6H5 130 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 TRBV6-1A0A0K0K1D8 114 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 FBLL1A6NHQ2 334 aaKnown RBP11.97□□□□□ -0.49
COMMD4-210ENST00000564587 COLCA2A8K830 154 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 TCRAP04437 139 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 S100PP25815 95 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 BMI1P35226 326 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 CSN1S1P47710 185 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 SIGLEC15Q6ZMC9 328 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 BTF3L4Q96K17 158 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 IMMP2LQ96T52 175 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 SLC50A1Q9BRV3 221 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 SERTAD4Q9NUC0 356 aa11.97□□□□□ -0.49
COMMD4-210ENST00000564587 ZNF785A8K8V0 405 aa11.96□□□□□ -0.49
COMMD4-210ENST00000564587 RNASE1P07998 156 aaKnown RBP11.96□□□□□ -0.49
COMMD4-210ENST00000564587 LGALS1P09382 135 aaKnown RBP11.96□□□□□ -0.49
COMMD4-210ENST00000564587 WFDC12Q8WWY7 111 aa11.96□□□□□ -0.49
COMMD4-210ENST00000564587 SFRP2Q96HF1 295 aa11.96□□□□□ -0.49
COMMD4-210ENST00000564587 IGF2BP2-AS1Q96M15 143 aa11.96□□□□□ -0.49
COMMD4-210ENST00000564587 FAM181BA6NEQ2 426 aa11.95□□□□□ -0.5
COMMD4-210ENST00000564587 GCGP01275 180 aa11.95□□□□□ -0.5
COMMD4-210ENST00000564587 C16orf54Q6UWD8 224 aa11.95□□□□□ -0.5
COMMD4-210ENST00000564587 BAGE2Q86Y30 109 aa11.95□□□□□ -0.5
COMMD4-210ENST00000564587 OR10G8Q8NGN5 311 aa11.95□□□□□ -0.5
COMMD4-210ENST00000564587 DUX5Q96PT3 197 aa11.95□□□□□ -0.5
COMMD4-210ENST00000564587 UFC1Q9Y3C8 167 aa11.95□□□□□ -0.5
COMMD4-210ENST00000564587 H3BTX0 84 aa11.94□□□□□ -0.5
COMMD4-210ENST00000564587 LY6G6DO95868 133 aa11.94□□□□□ -0.5
COMMD4-210ENST00000564587 TRBV12-3P01733 135 aa11.94□□□□□ -0.5
COMMD4-210ENST00000564587 RPLP1P05386 114 aaKnown RBP11.94□□□□□ -0.5
COMMD4-210ENST00000564587 SNRPCP09234 159 aaKnown RBP11.94□□□□□ -0.5
COMMD4-210ENST00000564587 KCNIP4Q6PIL6 250 aa11.94□□□□□ -0.5
COMMD4-210ENST00000564587 LCNL1Q6ZST4 164 aa11.94□□□□□ -0.5
COMMD4-210ENST00000564587 Q6ZSV7 163 aa11.94□□□□□ -0.5
COMMD4-210ENST00000564587 EXOC3-AS1Q8N2X6 119 aa11.94□□□□□ -0.5
COMMD4-210ENST00000564587 KLHDC1Q8N7A1 406 aa11.94□□□□□ -0.5
COMMD4-210ENST00000564587 DAZ1Q9NQZ3 744 aaKnown RBP11.94□□□□□ -0.5
COMMD4-210ENST00000564587 OSTCQ9NRP0 149 aa11.94□□□□□ -0.5
COMMD4-210ENST00000564587 NIPBLQ6KC79 2804 aaeCLIP11.93□□□□□ -0.5
COMMD4-210ENST00000564587 IGHV3OR16-8A0A075B7F1 116 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 ISLRO14498 428 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 FOLR2P14207 255 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 HILS1P60008 231 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 GNG5P63218 68 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 ELOBQ15370 118 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 RPEL1Q2QD12 228 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 FAM24BQ8N5W8 94 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 TMEM75Q8N9X5 138 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 C17orf77Q96MU5 243 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 YPEL4Q96NS1 127 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 C16orf95Q9H693 158 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 SMAD5-AS1Q9Y6J3 95 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 VPS13CQ709C8 3753 aa11.93□□□□□ -0.5
COMMD4-210ENST00000564587 TRBV24-1A0A075B6N3 115 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 IGHV7-4-1A0A0J9YVY3 117 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 ZNF320A2RRD8 509 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 PGPEP1LA6NFU8 196 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 DIRC3C9JPN6 131 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 CDX1P47902 265 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-210ENST00000564587 ERVFC1-1P60608 527 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 SAMD13Q5VXD3 122 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 FAM231DQ6ZW35 169 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 REC114Q7Z4M0 266 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 GLMPQ8WWB7 406 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
COMMD4-210ENST00000564587 ZNF331Q9NQX6 463 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-210ENST00000564587 RPH3ALQ9UNE2 315 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 ZFP30Q9Y2G7 519 aa11.92□□□□□ -0.5
COMMD4-210ENST00000564587 TMA7Q9Y2S6 64 aaKnown RBP11.92□□□□□ -0.5
COMMD4-210ENST00000564587 MAP1AP78559 2803 aaPredicted RBP11.92□□□□□ -0.5
COMMD4-210ENST00000564587 FLNAP21333 2647 aaKnown RBP11.92□□□□□ -0.5
COMMD4-210ENST00000564587 TRAV9-1A0A075B6T8 112 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 K7EN84 100 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 LGALS9O00182 355 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 SLC17A3O00476 420 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 ZNF207O43670 478 aaKnown RBP11.91□□□□□ -0.5
COMMD4-210ENST00000564587 LTAP01374 205 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 IGLV2-8P01709 118 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 RAB5AP20339 215 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 FOXL1Q12952 345 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 C10orf99Q6UWK7 81 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 UNQ9165/PRO28630Q6UXU0 137 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 GOLT1AQ6ZVE7 132 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 ESM1Q9NQ30 184 aa11.91□□□□□ -0.5
COMMD4-210ENST00000564587 TRAV34A0A0B4J273 112 aa11.9□□□□□ -0.5
COMMD4-210ENST00000564587 PFN1P07737 140 aaKnown RBP11.9□□□□□ -0.5
COMMD4-210ENST00000564587 MGST1P10620 155 aaKnown RBP11.9□□□□□ -0.5
COMMD4-210ENST00000564587 RPL19P84098 196 aaKnown RBP11.9□□□□□ -0.5
COMMD4-210ENST00000564587 FLI1Q01543 452 aaPredicted RBP11.9□□□□□ -0.5
COMMD4-210ENST00000564587 PSG3Q16557 428 aa11.9□□□□□ -0.5
COMMD4-210ENST00000564587 TMEM183AQ8IXX5 376 aa11.9□□□□□ -0.5
COMMD4-210ENST00000564587 LINC00479Q96M42 142 aa11.9□□□□□ -0.5
COMMD4-210ENST00000564587 AURKAIP1Q9NWT8 199 aaPredicted RBP11.9□□□□□ -0.5
COMMD4-210ENST00000564587 SMPXQ9UHP9 88 aa11.9□□□□□ -0.5
COMMD4-210ENST00000564587 ZANQ9Y493 2812 aa11.89□□□□□ -0.51
COMMD4-210ENST00000564587 A8MWP6 167 aa11.89□□□□□ -0.51
COMMD4-210ENST00000564587 APOHP02749 345 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms