RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 C4orf22Q6V702 233 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 TCTE3Q8IZS6 198 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 OR51A4Q8NGJ6 313 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 BRK1Q8WUW1 75 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 RETNLBQ9BQ08 111 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 STRCQ7RTU9 1775 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 A2MP01023 1474 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 NCAPD3P42695 1498 aa1.36□□□□□ -2.19
UBR1-205ENST00000564540 RTL9Q8NET4 1388 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 MED23Q9ULK4 1368 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 SBF1O95248 1867 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 ANKRD31Q8N7Z5 1873 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 MYO5AQ9Y4I1 1855 aaKnown RBP1.35□□□□□ -2.19
UBR1-205ENST00000564540 NCKAP5O14513 1909 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 H3BRN7 92 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 UBL3O95164 117 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 MT-ND6P03923 174 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 COX4I1P13073 169 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 CRYGSP22914 178 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 RPL22P35268 128 aaKnown RBP1.35□□□□□ -2.19
UBR1-205ENST00000564540 SSR2P43308 183 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 FOXA3P55318 350 aaPredicted RBP1.35□□□□□ -2.19
UBR1-205ENST00000564540 DEFB113Q30KQ7 82 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 SPANXN5Q5MJ07 72 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 C1orf134Q5TEV5 83 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 TMEM14EPQ6UXP3 125 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 LINC00301Q8NCQ3 95 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 OR5H6Q8NGV6 325 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 NAT14Q8WUY8 206 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 POP5Q969H6 163 aaKnown RBP1.35□□□□□ -2.19
UBR1-205ENST00000564540 DIRC1Q969H9 104 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 PFDN5Q99471 154 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 LINC00467Q9BRT7 94 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 TTTY12Q9BZ98 90 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 COPZ2Q9P299 210 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 PXDNLA1KZ92 1463 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 FER1L6Q2WGJ9 1857 aa1.35□□□□□ -2.19
UBR1-205ENST00000564540 GLI3P10071 1580 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 FRMPD1Q5SYB0 1578 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 TRPM1Q7Z4N2 1603 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 IGKV2D-26A0A0A0MRZ7 120 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 PAEPP09466 180 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 CDK5R1Q15078 307 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 Q1T7F1 81 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 LINC00471Q8N535 108 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 FAM216BQ8N7L0 139 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 Q8N814 137 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 OR2T35Q8NGX2 323 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 PRELID3AQ96N28 172 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 TSC22D3Q99576 134 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 SMIM3Q9BZL3 60 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 TPT1P8Q9HAU6 139 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 OR5AC2Q9NZP5 309 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 LY96Q9Y6Y9 160 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 U3KQ87 197 aa1.34□□□□□ -2.19
UBR1-205ENST00000564540 CUL9Q8IWT3 2517 aa1.34□□□□□ -2.2
UBR1-205ENST00000564540 MYH10P35580 1976 aa1.34□□□□□ -2.2
UBR1-205ENST00000564540 NUMA1Q14980 2115 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 EFCAB10A6NFE3 127 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 SLC25A5P05141 298 aaKnown RBP1.33□□□□□ -2.2
UBR1-205ENST00000564540 EVI2AP22794 236 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 RAB5CP51148 216 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 GLYATL3Q5SZD4 288 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 LINC00311Q8N616 119 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 MORN4Q8NDC4 146 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 OR5A2Q8NGI9 324 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 MCEEQ96PE7 176 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 TXNDC17Q9BRA2 123 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 C14orf132Q9NPU4 83 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 DSPPQ9NZW4 1301 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 BICRAQ9NZM4 1560 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 MPDZO75970 2070 aa1.33□□□□□ -2.2
UBR1-205ENST00000564540 PIK3C2AO00443 1686 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 FAM135BQ49AJ0 1406 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 TCOF1Q13428 1488 aaKnown RBP1.32□□□□□ -2.2
UBR1-205ENST00000564540 ARHGEF11O15085 1522 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 NISCHQ9Y2I1 1504 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 TAF1LQ8IZX4 1826 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 TRAV12-1A0A0B4J245 112 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 C2orf70A6NJV1 201 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 ZNF727A8MUV8 499 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 C17orf112F2Z3M2 114 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 M0R233 179 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 PROSCO94903 275 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 CRPP02741 224 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 TCRAP04437 139 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 ZNF93P35789 620 aaPredicted RBP1.32□□□□□ -2.2
UBR1-205ENST00000564540 MAXP61244 160 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 MRPS36P82909 103 aaKnown RBP1.32□□□□□ -2.2
UBR1-205ENST00000564540 ELOBQ15370 118 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 TSTD1Q8NFU3 115 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 OR4B1Q8NGF8 309 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 CCL4L1Q8NHW4 92 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 HYLS1Q96M11 299 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 AP1S3Q96PC3 154 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 VPS25Q9BRG1 176 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 CST9LQ9H4G1 147 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 CCDC171Q6TFL3 1326 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 RFX7Q2KHR2 1363 aa1.32□□□□□ -2.2
UBR1-205ENST00000564540 DOCK10Q96BY6 2186 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms