RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 DEFA5Q01523 94 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 GCSAMLQ5JQS6 135 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 ZNF343Q6P1L6 599 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 OR8I2Q8N0Y5 310 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 EIF4E3Q8N5X7 224 aaKnown RBP6.32□□□□□ -1.4
SMG1-209ENST00000563836 LYPD6BQ8NI32 183 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 CITED2Q99967 270 aaPredicted RBP6.32□□□□□ -1.4
SMG1-209ENST00000563836 SLC25A39Q9BZJ4 359 aaPredicted RBP6.32□□□□□ -1.4
SMG1-209ENST00000563836 C16orf95Q9H693 158 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 SEPSECSQ9HD40 501 aaKnown RBP6.32□□□□□ -1.4
SMG1-209ENST00000563836 MRPL36Q9P0J6 103 aaKnown RBP6.32□□□□□ -1.4
SMG1-209ENST00000563836 RFNGQ9Y644 331 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 ARL2-SNX15V9GYD0 113 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 HIVEP2P31629 2446 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 HECTD1Q9ULT8 2610 aa6.32□□□□□ -1.4
SMG1-209ENST00000563836 WI2-2373I1.2A0A1W2PRP0 233 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 F8W036 122 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 K7EQM0 130 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 PDE6DO43924 150 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 IGKV1-17P01599 117 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 HSPB1P04792 205 aaKnown RBP6.31□□□□□ -1.4
SMG1-209ENST00000563836 GCHFRP30047 84 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 CEBPGP53567 150 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 PSG9Q00887 426 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 MIR17HGQ75NE6 70 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 ZNF491Q8N8L2 437 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 CMTM2Q8TAZ6 248 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 RXFP4Q8TDU9 374 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 TMEM37Q8WXS4 190 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 RPUSD4Q96CM3 377 aaKnown RBP6.31□□□□□ -1.4
SMG1-209ENST00000563836 OR5B12Q96R08 314 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 KRTAP17-1Q9BYP8 105 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 SLC35B3Q9H1N7 401 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 AAMDCQ9H7C9 122 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 PEMTQ9UBM1 199 aa6.31□□□□□ -1.4
SMG1-209ENST00000563836 FLNAP21333 2647 aaKnown RBP6.31□□□□□ -1.4
SMG1-209ENST00000563836 PDZD2O15018 2839 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 CLPSL1A2RUU4 121 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 C11orf94C9JXX5 98 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 PPP5D1E7EU14 171 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 PAGE4O60829 102 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 NDUFS6O75380 124 aaKnown RBP6.3□□□□□ -1.4
SMG1-209ENST00000563836 TNFRSF6BO95407 300 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 CD5P06127 495 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 CSN1S1P47710 185 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 CDX1P47902 265 aaPredicted RBP6.3□□□□□ -1.4
SMG1-209ENST00000563836 MEF2BQ02080 365 aaPredicted RBP6.3□□□□□ -1.4
SMG1-209ENST00000563836 SOHLH1Q5JUK2 328 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 ZNF506Q5JVG8 444 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 C1orf194Q5T5A4 169 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 SAMD13Q5VXD3 122 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 WDR73Q6P4I2 378 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 TOMM20LQ6UXN7 152 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 KLHL30-AS1Q8NEE0 82 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 TCEAL7Q9BRU2 100 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 SHANK2-AS3Q9BTD1 123 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 CHRDL1Q9BU40 450 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 ESM1Q9NQ30 184 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 MRPL27Q9P0M9 148 aaKnown RBP6.3□□□□□ -1.4
SMG1-209ENST00000563836 TMEM14CQ9P0S9 112 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 TSSC4Q9Y5U2 329 aaPredicted RBP6.3□□□□□ -1.4
SMG1-209ENST00000563836 MYO9AB2RTY4 2548 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 NBPF19A0A087WUL8 3843 aa6.3□□□□□ -1.4
SMG1-209ENST00000563836 IGHV3-35A0A0C4DH35 117 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 A0A1W2PRE2 83 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 HELTA6NFD8 242 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 PGPEP1LA6NFU8 196 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 ZNF98A6NK75 572 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 LINC01619G3V211 115 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 H3BRN7 92 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 OR10J4P0C629 311 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 NBEAP1P0C6P0 100 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 HIST1H1EP10412 219 aaKnown RBP6.29□□□□□ -1.4
SMG1-209ENST00000563836 UBE2G2P60604 165 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 ZNF726P1Q15940 193 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 FAM74A3Q4VXF1 159 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 GPHB5Q86YW7 130 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 LINC01006Q8NI28 216 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 BLNKQ8WV28 456 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 C4orf3Q8WVX3 66 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 SLC25A2Q9BXI2 301 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 DAZ1Q9NQZ3 744 aaKnown RBP6.29□□□□□ -1.4
SMG1-209ENST00000563836 CLEC5AQ9NY25 188 aa6.29□□□□□ -1.4
SMG1-209ENST00000563836 TMEM218A2RU14 115 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 TMEM250H0YL14 139 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 K7EMT4 169 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 SFTA3P0C7M3 94 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 PAFAH1B2P68402 229 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 CCL20P78556 96 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 PDE6HQ13956 83 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 USF2Q15853 346 aaPredicted RBP6.28□□□□□ -1.4
SMG1-209ENST00000563836 SPATA31B1PQ5VZV4 182 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 PATE2Q6UY27 113 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 SSX7Q7RTT5 188 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 LYPD1Q8N2G4 141 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 SVBPQ8N300 66 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 OR1N2Q8NGR9 330 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 NIPSNAP3BQ9BS92 247 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 SCRT1Q9BWW7 348 aa6.28□□□□□ -1.4
SMG1-209ENST00000563836 SEC11CQ9BY50 192 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms