RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 DTD1Q8TEA8 209 aa7.16□□□□□ -1.26
SF3B3-204ENST00000563739 C5orf51A6NDU8 294 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 L7N2F9 121 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 HBE1P02100 147 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 SLC25A4P12235 298 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 CXCL2P19875 107 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 AZU1P20160 251 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 CYCSP99999 105 aaKnown RBP7.15□□□□□ -1.26
SF3B3-204ENST00000563739 IAH1Q2TAA2 248 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-204ENST00000563739 C2orf83Q53S99 150 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 FAM78BQ5VT40 261 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 OR4D5Q8NGN0 318 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 OR1S2Q8NGQ3 325 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 C18orf15Q96N68 181 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 ATG101Q9BSB4 218 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 NMES1Q9C002 83 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 MAGT1Q9H0U3 335 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 MDFICQ9P1T7 246 aa7.15□□□□□ -1.26
SF3B3-204ENST00000563739 IGKV1D-37A0A075B6S9 117 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 FXYD6-FXYD2A0A087WZ82 144 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 RPS10-NUDT3A0A1W2PQS6 291 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 ZNF705GA8MUZ8 300 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-204ENST00000563739 FAM25EA8MYX2 175 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 SYNGR2O43760 224 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 TSC22D2O75157 780 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 ATP6V1G1O75348 118 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 MED6O75586 246 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 NUDT3O95989 172 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 IAPPP10997 89 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 OR10J1P30954 320 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 OPCMLQ14982 345 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 RRN3P1Q2M238 152 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 SSX7Q7RTT5 188 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 RNASEH2CQ8TDP1 164 aaKnown RBP7.14□□□□□ -1.27
SF3B3-204ENST00000563739 CIB3Q96Q77 187 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-204ENST00000563739 Q9H8V8 135 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 U3KQ87 197 aa7.14□□□□□ -1.27
SF3B3-204ENST00000563739 LYRM9A8MSI8 78 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 SSSCA1O60232 199 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 SCGB1D2O95969 90 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 TOMM40O96008 361 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 PSG1P11464 419 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 PSMB3P49720 205 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 AP2S1P53680 142 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-204ENST00000563739 ATP5IP56385 69 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-204ENST00000563739 LINC00315P59091 139 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 POLR2GP62487 172 aaKnown RBP eCLIP7.13□□□□□ -1.27
SF3B3-204ENST00000563739 DLK1P80370 383 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 HAMPP81172 84 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 PSG9Q00887 426 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 ID3Q02535 119 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 IL15RAQ13261 267 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 TEX261Q6UWH6 196 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 TMUB2Q71RG4 321 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 ZNF546Q86UE3 836 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 OR4B1Q8NGF8 309 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 OR51G1Q8NGK1 321 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 PPP1R1CQ8WVI7 109 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 C2orf50Q96LR7 162 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 IGF2BP2-AS1Q96M15 143 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 UHRF2Q96PU4 802 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 UPK3BQ9BT76 320 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 RCL1Q9Y2P8 373 aaKnown RBP7.13□□□□□ -1.27
SF3B3-204ENST00000563739 GOLT1BQ9Y3E0 138 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 RNF213Q63HN8 5207 aa7.13□□□□□ -1.27
SF3B3-204ENST00000563739 TRAV30A0A087WSZ9 112 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 A0A0D9SG52 128 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 H3BP45 60 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 M0R2Z0 102 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 WRBO00258 174 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 ARPC5O15511 151 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 MPC2O95563 127 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 DEFB130BP0DP73 79 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 DEFB130AP0DP74 79 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 TSPOP30536 169 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 S100A11P31949 105 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 ZNF680Q8NEM1 530 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 THAP6Q8TBB0 222 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 NPIPB3Q92617 1050 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 NARS2Q96I59 477 aaKnown RBP7.12□□□□□ -1.27
SF3B3-204ENST00000563739 LINC00052Q96N35 136 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 ZNF586Q9NXT0 402 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 GSKIPQ9P0R6 139 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 TNFSF18Q9UNG2 199 aa7.12□□□□□ -1.27
SF3B3-204ENST00000563739 KRTAP9-6A0A140TA67 174 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 F5H768 121 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 IFNA7P01567 189 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 MBPP02686 304 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-204ENST00000563739 SMR3BP02814 79 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-204ENST00000563739 DNAH10OSP0CZ25 163 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 CCL18P55774 89 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 RPP30P78346 268 aaKnown RBP7.11□□□□□ -1.27
SF3B3-204ENST00000563739 OR2F1Q13607 317 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 ZNF345Q14585 488 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 ESRGQ1W209 222 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-204ENST00000563739 BAP18Q8IXM2 172 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 SLC7A5P1Q8MH63 180 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 KCNRGQ8N5I3 272 aa7.11□□□□□ -1.27
SF3B3-204ENST00000563739 LINC00612Q8N6U2 182 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms