RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 LINC01546A6NGU7 62 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 NCBP2LA6PVI3 153 aaKnown RBP3.87□□□□□ -1.79
TCF4-215ENST00000562638 ADARB2-AS1A8MUL3 147 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 H3BT86 120 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 SPINK4O60575 86 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 GP9P14770 177 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 CACNG7P62955 275 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 RPL18Q07020 188 aaKnown RBP3.87□□□□□ -1.79
TCF4-215ENST00000562638 Q6ZVL8 140 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 SERP2Q8N6R1 65 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 TMEM52Q8NDY8 209 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 NFAM1Q8NET5 270 aaPredicted RBP3.87□□□□□ -1.79
TCF4-215ENST00000562638 NTN5Q8WTR8 489 aaPredicted RBP3.87□□□□□ -1.79
TCF4-215ENST00000562638 CNRIP1Q96F85 164 aaPredicted RBP3.87□□□□□ -1.79
TCF4-215ENST00000562638 ZNF414Q96IQ9 312 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 C16orf92Q96LL3 132 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 FOXC2Q99958 501 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 RTL8AQ9BWD3 113 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 C7orf69Q9H7B7 122 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 GOLGA2P5Q9HBQ8 144 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 OTORQ9NRC9 128 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 LAMTOR3Q9UHA4 124 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 WDR83OSQ9Y284 106 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 PCDH15Q96QU1 1955 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 PCNX3Q9H6A9 2034 aa3.87□□□□□ -1.79
TCF4-215ENST00000562638 A0A0D9SEW6 157 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 A0A0G2JNJ9 132 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 A0A0G2JRQ6 117 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 TRBV7-6A0A0J9YX20 115 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 OVOL3O00110 214 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 MRPS12O15235 138 aaKnown RBP3.86□□□□□ -1.79
TCF4-215ENST00000562638 CCL16O15467 120 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 SS18L1O75177 396 aaPredicted RBP3.86□□□□□ -1.79
TCF4-215ENST00000562638 IGF1P05019 195 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 ARL14EPLP0DKL9 152 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 SLC25A16P16260 332 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 CCL1P22362 96 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 PLA2G5P39877 138 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 NPC2P61916 151 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 MRPS36P82909 103 aaKnown RBP3.86□□□□□ -1.79
TCF4-215ENST00000562638 FXYD3Q14802 87 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 OXLD1Q5BKU9 147 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 KHDC1LQ5JSQ8 128 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 ZNF793Q6ZN11 406 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 C20orf204Q6ZNR8 217 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 SRSF12Q8WXF0 261 aaKnown RBP3.86□□□□□ -1.79
TCF4-215ENST00000562638 FAM168AQ92567 244 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 SMIM14Q96QK8 99 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 MGST2Q99735 147 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 GFRA4Q9GZZ7 299 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 CALYQ9NYX4 217 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 Q9UF83 564 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 Q9UFV3 132 aa3.86□□□□□ -1.79
TCF4-215ENST00000562638 ZNF256Q9Y2P7 627 aaPredicted RBP3.86□□□□□ -1.79
TCF4-215ENST00000562638 TDRD6O60522 2096 aaKnown RBP3.86□□□□□ -1.79
TCF4-215ENST00000562638 COL4A5P29400 1685 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 IGLV1-36A0A0B4J1U3 117 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 TRBV10-2A0A0K0K1G8 114 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 PGPA6NDG6 321 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 LINC01549A6NIU2 74 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 INS-IGF2F8WCM5 200 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 H3BMM0 161 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 H3BP45 60 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 FOXS1O43638 330 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 GP1BBP13224 206 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 EMDP50402 254 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 RPL18AQ02543 176 aaKnown RBP3.85□□□□□ -1.79
TCF4-215ENST00000562638 CFHR3Q02985 330 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 TFF3Q07654 80 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 ZNF816Q0VGE8 651 aaPredicted RBP3.85□□□□□ -1.79
TCF4-215ENST00000562638 ZNF56Q15929 161 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 PLPP4Q5VZY2 271 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 C9orf57Q5W0N0 161 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 GTSCR1Q86UQ5 136 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 CXorf67Q86X51 503 aaPredicted RBP3.85□□□□□ -1.79
TCF4-215ENST00000562638 NDUFA11Q86Y39 141 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 DCAF4L2Q8NA75 395 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 C10orf105Q8TEF2 133 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 UBE2WQ96B02 151 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 BORCS8Q96FH0 119 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 ZNF799Q96GE5 643 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 Q96M66 194 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 GPHA2Q96T91 129 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 SRXN1Q9BYN0 137 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 PRRG4Q9BZD6 226 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 PLEKHA3Q9HB20 300 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 NXT2Q9NPJ8 142 aaKnown RBP3.85□□□□□ -1.79
TCF4-215ENST00000562638 U3KQK5 164 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 THADAQ6YHU6 1953 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 SCN3AQ9NY46 2000 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 KIF26BQ2KJY2 2108 aa3.85□□□□□ -1.79
TCF4-215ENST00000562638 TMSB15BA0A087X1C1 80 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 A0A0U1RQV1 116 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 SRRM4A7MD48 611 aaKnown RBP3.84□□□□□ -1.79
TCF4-215ENST00000562638 H3BSH0 61 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 PEX7O00628 323 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 BUB3O43684 328 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 LYZL6O75951 148 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 ZNF823P16415 610 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 HOXD3P31249 432 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms