RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 HSPB8Q9UJY1 196 aa0.22□□□□□ -2.37
DENND4A-205ENST00000562540 TRBV30A0A0K0K1B3 111 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 NUPR2A6NF83 97 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 C5orf67F2Z3F1 127 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 AIPO00170 330 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 IGLV1-51P01701 117 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 CTXN2P0C2S0 81 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 FOXA3P55318 350 aaPredicted RBP0.21□□□□□ -2.38
DENND4A-205ENST00000562540 FXYD4P59646 89 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 MRPS25P82663 173 aaKnown RBP0.21□□□□□ -2.38
DENND4A-205ENST00000562540 EIF3IQ13347 325 aaKnown RBP0.21□□□□□ -2.38
DENND4A-205ENST00000562540 PATE2Q6UY27 113 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 Q6ZS92 163 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 ARPINQ7Z6K5 226 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 DGCR14Q96DF8 476 aaKnown RBP0.21□□□□□ -2.38
DENND4A-205ENST00000562540 ZHX1-C8orf76Q96EF9 292 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 CACYBPQ9HB71 228 aaKnown RBP0.21□□□□□ -2.38
DENND4A-205ENST00000562540 PTPRDP23468 1912 aa0.21□□□□□ -2.38
DENND4A-205ENST00000562540 PHRF1Q9P1Y6 1649 aaKnown RBP0.2□□□□□ -2.38
DENND4A-205ENST00000562540 A0A096LPI6 279 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 ZNF727A8MUV8 499 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 C1QBP02746 253 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 CRHP06850 196 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 ZNF137PP52743 207 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 TMBIM6P55061 237 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 FXYD6P3P58550 94 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 VBP1P61758 197 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 SCGB2B2Q4G0G5 96 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 LRRC18Q8N456 261 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 ARMC1Q9NVT9 282 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 JPT1Q9UK76 154 aa0.2□□□□□ -2.38
DENND4A-205ENST00000562540 RFX7Q2KHR2 1363 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 UBR2Q8IWV8 1755 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 TPRP12270 2363 aaKnown RBP0.19□□□□□ -2.38
DENND4A-205ENST00000562540 IFNA6P05013 189 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 CD14P08571 375 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 CYBAP13498 195 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 SPINT3P49223 89 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 FADDQ13158 208 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 C6orf52Q5T4I8 152 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 TMEM14EPQ6UXP3 125 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 PPTC7Q8NI37 304 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 PYCARDQ9ULZ3 195 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 BOKQ9UMX3 212 aaPredicted RBP0.19□□□□□ -2.38
DENND4A-205ENST00000562540 MYH2Q9UKX2 1941 aa0.19□□□□□ -2.38
DENND4A-205ENST00000562540 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
DENND4A-205ENST00000562540 hDV103S1A0JD37 113 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 G3V2T6 193 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 RER1O15258 196 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 LYRM1O43325 122 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 IFNA4P05014 189 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 CXCL1P09341 107 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 KRTAP2-3P0C7H8 128 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 ARPP19P56211 112 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 GNG5P63218 68 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 KLRD1Q13241 179 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 OCIAD2Q56VL3 154 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 AKR1C8PQ5T2L2 129 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 MNS1Q8NEH6 495 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 TSKUQ8WUA8 353 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 KRTAP2-4Q9BYR9 128 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 KRTAP2-1Q9BYU5 128 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 OR2J1Q9GZK6 312 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 PRNDQ9UKY0 176 aa0.18□□□□□ -2.38
DENND4A-205ENST00000562540 TMEM210A6NLX4 147 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 H7C1C5 153 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 IFNA14P01570 189 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 INSL3P51460 131 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 LCN6P62502 163 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 TMED2Q15363 201 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 NUP210LQ5VU65 1888 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 Q6ZQY7 126 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 CEP19Q96LK0 163 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 PAIP2Q9BPZ3 127 aaKnown RBP0.17□□□□□ -2.38
DENND4A-205ENST00000562540 MAP1LC3BQ9GZQ8 125 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 FAT4Q6V0I7 4981 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 TANC2Q9HCD6 1990 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 KCPQ6ZWJ8 1503 aa0.17□□□□□ -2.38
DENND4A-205ENST00000562540 CEP164Q9UPV0 1460 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 DMBT1Q9UGM3 2413 aaPredicted RBP0.16□□□□□ -2.38
DENND4A-205ENST00000562540 MIA2Q96PC5 1412 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 C9orf170A2RU37 121 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 RIIAD1A6NNX1 92 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 IGHV3-33P01772 117 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 APOA2P02652 100 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 S100A6P06703 90 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 OGNP20774 298 aaKnown RBP0.16□□□□□ -2.38
DENND4A-205ENST00000562540 HSD11B1P28845 292 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 PHBP35232 272 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 MIR22HGQ0VDD5 57 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 Q86TA4 180 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 PLAC4Q8WY50 150 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 FAM103A1Q9BTL3 118 aaKnown RBP0.16□□□□□ -2.38
DENND4A-205ENST00000562540 SSR3Q9UNL2 185 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 IGSF10Q6WRI0 2623 aa0.16□□□□□ -2.38
DENND4A-205ENST00000562540 MYO7AQ13402 2215 aa0.15□□□□□ -2.38
DENND4A-205ENST00000562540 BCL9O00512 1426 aa0.15□□□□□ -2.39
DENND4A-205ENST00000562540 TRAV5A0A0B4J249 113 aa0.15□□□□□ -2.39
DENND4A-205ENST00000562540 HIST1H2BKO60814 126 aa0.15□□□□□ -2.39
DENND4A-205ENST00000562540 TRGC2P03986 189 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms