RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 COX19Q49B96 90 aa9.15□□□□□ -0.94
PCAT1-202ENST00000561978 RUSC1-AS1Q66K80 236 aa9.15□□□□□ -0.94
PCAT1-202ENST00000561978 C19orf35Q6ZS72 473 aa9.15□□□□□ -0.94
PCAT1-202ENST00000561978 Q8N6K4 173 aa9.15□□□□□ -0.94
PCAT1-202ENST00000561978 IGF2BP2-AS1Q96M15 143 aa9.15□□□□□ -0.94
PCAT1-202ENST00000561978 CHRDL1Q9BU40 450 aa9.15□□□□□ -0.94
PCAT1-202ENST00000561978 TPPP3Q9BW30 176 aa9.15□□□□□ -0.94
PCAT1-202ENST00000561978 THYN1Q9P016 225 aa9.15□□□□□ -0.94
PCAT1-202ENST00000561978 TMEM14CQ9P0S9 112 aa9.15□□□□□ -0.94
PCAT1-202ENST00000561978 V9GYV3 84 aa9.15□□□□□ -0.94
PCAT1-202ENST00000561978 TRBV9A0A0B4J1U6 114 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 A0A1W2PRD5 423 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 A0A1W2PRF3 423 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 A0A1W2PRM7 423 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 INAFM1C9JVW0 142 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 K7EIM0 57 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 BRS3P32247 399 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 RANP62826 216 aaKnown RBP9.15□□□□□ -0.95
PCAT1-202ENST00000561978 OR5I1Q13606 314 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 IBA57Q5T440 356 aaKnown RBP9.15□□□□□ -0.95
PCAT1-202ENST00000561978 TTC9CQ8N5M4 171 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 OR10D4PQ8NGN7 298 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 ARPC1AQ92747 370 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 ATG101Q9BSB4 218 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 EPDR1Q9UM22 224 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 TNFRSF18Q9Y5U5 241 aa9.15□□□□□ -0.95
PCAT1-202ENST00000561978 PGPA6NDG6 321 aa9.14□□□□□ -0.95
PCAT1-202ENST00000561978 SLC17A3O00476 420 aa9.14□□□□□ -0.95
PCAT1-202ENST00000561978 SCGB2A1O75556 95 aa9.14□□□□□ -0.95
PCAT1-202ENST00000561978 IGLV2-8P01709 118 aa9.14□□□□□ -0.95
PCAT1-202ENST00000561978 RPLP1P05386 114 aaKnown RBP9.14□□□□□ -0.95
PCAT1-202ENST00000561978 MGST1P10620 155 aaKnown RBP9.14□□□□□ -0.95
PCAT1-202ENST00000561978 CD24P25063 80 aa9.14□□□□□ -0.95
PCAT1-202ENST00000561978 LYZP61626 148 aa9.14□□□□□ -0.95
PCAT1-202ENST00000561978 CX3CL1P78423 397 aa9.14□□□□□ -0.95
PCAT1-202ENST00000561978 TMEM183BQ1AE95 376 aa9.14□□□□□ -0.95
PCAT1-202ENST00000561978 GFI1BQ5VTD9 330 aa9.14□□□□□ -0.95
PCAT1-202ENST00000561978 BAGE2Q86Y30 109 aa9.14□□□□□ -0.95
PCAT1-202ENST00000561978 FAM110AQ9BQ89 295 aa9.14□□□□□ -0.95
PCAT1-202ENST00000561978 MRPL27Q9P0M9 148 aaKnown RBP9.14□□□□□ -0.95
PCAT1-202ENST00000561978 M0R143 59 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 TOMM40O96008 361 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 SLC25A5P05141 298 aaKnown RBP9.13□□□□□ -0.95
PCAT1-202ENST00000561978 GP9P14770 177 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 FABP4P15090 132 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 MFAP4P55083 255 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 UBE2G1P62253 170 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 FAM231DQ6ZW35 169 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 BLNKQ8WV28 456 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 SLC25A39Q9BZJ4 359 aaPredicted RBP9.13□□□□□ -0.95
PCAT1-202ENST00000561978 KLF12Q9Y4X4 402 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 TCF21O43680 179 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 IGKV1-17P01599 117 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 HIST1H1EP10412 219 aaKnown RBP9.13□□□□□ -0.95
PCAT1-202ENST00000561978 PSG3Q16557 428 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 PDZD11Q5EBL8 140 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 IL17RELQ6ZVW7 336 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 DYNAPQ8N1N2 210 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 C5orf17Q8NAS9 161 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 HIST1H2BLQ99880 126 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 VPS25Q9BRG1 176 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 GNB1LQ9BYB4 327 aa9.13□□□□□ -0.95
PCAT1-202ENST00000561978 RNASE7Q9H1E1 156 aaKnown RBP9.13□□□□□ -0.95
PCAT1-202ENST00000561978 POLR3KQ9Y2Y1 108 aaPredicted RBP9.13□□□□□ -0.95
PCAT1-202ENST00000561978 IGLV11-55A0A075B6I3 123 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 EREGO14944 169 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 GNG7O60262 68 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 MT-ND6P03923 174 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 PYY3Q5JQD4 70 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 FMC1Q96HJ9 113 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 TBX15Q96SF7 602 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 FAM103A1Q9BTL3 118 aaKnown RBP9.12□□□□□ -0.95
PCAT1-202ENST00000561978 SMIM27A0A1W2PRY6 76 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 ZNF705GA8MUZ8 300 aaPredicted RBP9.12□□□□□ -0.95
PCAT1-202ENST00000561978 A8MWP6 167 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 BPIFA4PQ86YQ2 179 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 OR8I2Q8N0Y5 310 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 OTORQ9NRC9 128 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 SERTAD4Q9NUC0 356 aa9.12□□□□□ -0.95
PCAT1-202ENST00000561978 ATRQ13535 2644 aa9.11□□□□□ -0.95
PCAT1-202ENST00000561978 SCGB1A1P11684 91 aa9.11□□□□□ -0.95
PCAT1-202ENST00000561978 S100A7P31151 101 aa9.11□□□□□ -0.95
PCAT1-202ENST00000561978 TMEM18Q96B42 140 aa9.11□□□□□ -0.95
PCAT1-202ENST00000561978 LINC00479Q96M42 142 aa9.11□□□□□ -0.95
PCAT1-202ENST00000561978 GPR82Q96P67 336 aa9.11□□□□□ -0.95
PCAT1-202ENST00000561978 FANCD2OSQ96PS1 177 aa9.11□□□□□ -0.95
PCAT1-202ENST00000561978 SHANK2-AS3Q9BTD1 123 aa9.11□□□□□ -0.95
PCAT1-202ENST00000561978 Q9H3A6 140 aa9.11□□□□□ -0.95
PCAT1-202ENST00000561978 WI2-2373I1.2A0A1W2PRP0 233 aa9.1□□□□□ -0.95
PCAT1-202ENST00000561978 BRI3O95415 125 aa9.1□□□□□ -0.95
PCAT1-202ENST00000561978 HLA-DRB1P01911 266 aa9.1□□□□□ -0.95
PCAT1-202ENST00000561978 FAM120AOSQ5T036 256 aa9.1□□□□□ -0.95
PCAT1-202ENST00000561978 ASPHD1Q5U4P2 390 aa9.1□□□□□ -0.95
PCAT1-202ENST00000561978 LYPD1Q8N2G4 141 aa9.1□□□□□ -0.95
PCAT1-202ENST00000561978 ZNF491Q8N8L2 437 aa9.1□□□□□ -0.95
PCAT1-202ENST00000561978 OR4F17Q8NGA8 305 aa9.1□□□□□ -0.95
PCAT1-202ENST00000561978 RNF125Q96EQ8 232 aa9.1□□□□□ -0.95
PCAT1-202ENST00000561978 GRAMD2BQ96HH9 432 aa9.1□□□□□ -0.95
PCAT1-202ENST00000561978 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
PCAT1-202ENST00000561978 C7orf69Q9H7B7 122 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms