RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 DNAH8Q96JB1 4490 aa8.01□□□□□ -1.13
NSMCE1-202ENST00000561960 TRAV12-3A0A0B4J271 114 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 SLC17A3O00476 420 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 RLN2P04090 185 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 IL5P05113 134 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 HOXB5P09067 269 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 LINC00869P0C866 280 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 VAMP1P23763 118 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 CDKN1BP46527 198 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 SPCS2Q15005 226 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 SAMD13Q5VXD3 122 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 CYP2G1PQ6ZSU1 146 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 OR10J6PQ8NGY7 276 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 VSIG2Q96IQ7 327 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 PRRT1Q99946 306 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 SHANK2-AS3Q9BTD1 123 aa8□□□□□ -1.13
NSMCE1-202ENST00000561960 PMS2P5A8MQ11 134 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 SNURFLB1AK76 121 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 PITX3O75364 302 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 NXPH4O95158 308 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 ANXA7P20073 488 aaKnown RBP7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 BTF3P20290 206 aaKnown RBP7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 RAP2BP61225 183 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 B2MP61769 119 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 TMEM256Q8N2U0 113 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 OR4D5Q8NGN0 318 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 DIRAS2Q96HU8 199 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 C18orf15Q96N68 181 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 UPK3BQ9BT76 320 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 ARL6Q9H0F7 186 aa7.99□□□□□ -1.13
NSMCE1-202ENST00000561960 ANKRD20A5PA0PJZ0 165 aa7.98□□□□□ -1.13
NSMCE1-202ENST00000561960 SYNGR2O43760 224 aa7.98□□□□□ -1.13
NSMCE1-202ENST00000561960 HYPMO75409 117 aa7.98□□□□□ -1.13
NSMCE1-202ENST00000561960 ERVFC1-1P60608 527 aa7.98□□□□□ -1.13
NSMCE1-202ENST00000561960 SLC38A11Q08AI6 406 aa7.98□□□□□ -1.13
NSMCE1-202ENST00000561960 MORN5Q5VZ52 161 aa7.98□□□□□ -1.13
NSMCE1-202ENST00000561960 PATE2Q6UY27 113 aa7.98□□□□□ -1.13
NSMCE1-202ENST00000561960 GPR82Q96P67 336 aa7.98□□□□□ -1.13
NSMCE1-202ENST00000561960 GSN-AS1Q9NRJ2 163 aa7.98□□□□□ -1.13
NSMCE1-202ENST00000561960 TRGV2A0A075B6R0 118 aa7.97□□□□□ -1.13
NSMCE1-202ENST00000561960 H7BYZ3 331 aa7.97□□□□□ -1.13
NSMCE1-202ENST00000561960 SIVA1O15304 175 aa7.97□□□□□ -1.13
NSMCE1-202ENST00000561960 ANXA3P12429 323 aa7.97□□□□□ -1.13
NSMCE1-202ENST00000561960 RPL7P18124 248 aaKnown RBP7.97□□□□□ -1.13
NSMCE1-202ENST00000561960 Q6ZQT7 251 aa7.97□□□□□ -1.13
NSMCE1-202ENST00000561960 CCDC28AQ8IWP9 274 aa7.97□□□□□ -1.13
NSMCE1-202ENST00000561960 LINC00612Q8N6U2 182 aa7.97□□□□□ -1.13
NSMCE1-202ENST00000561960 PTTG2Q9NZH5 202 aa7.97□□□□□ -1.13
NSMCE1-202ENST00000561960 SCP2D1Q9UJQ7 156 aa7.97□□□□□ -1.13
NSMCE1-202ENST00000561960 SLC45A2Q9UMX9 530 aa7.97□□□□□ -1.13
NSMCE1-202ENST00000561960 TRGV1A0A0A0MS02 117 aa7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 A0A1W2PPQ1 181 aa7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 SSSCA1O60232 199 aa7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 ADAP1O75689 374 aa7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 SMIM18P0DKX4 95 aa7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 CT45A10P0DMU9 189 aa7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 POLR2GP62487 172 aaKnown RBP eCLIP7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 SSBP1Q04837 148 aaKnown RBP7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 ERCC8Q13216 396 aa7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 ICAM4Q14773 271 aa7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 ZNF493Q6ZR52 646 aa7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 STRAPQ9Y3F4 350 aaKnown RBP7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 LRP1Q07954 4544 aaKnown RBP7.96□□□□□ -1.14
NSMCE1-202ENST00000561960 HMCN2Q8NDA2 5059 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 A0A087WTM6 91 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 A0A087X0K7 114 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 J3QL48 77 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 EREGO14944 169 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 MRPS12O15235 138 aaKnown RBP7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 CFDP00746 253 aaPredicted RBP7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 IFNA5P01569 189 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 METTL15P1P0C7V9 234 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 PPP1R1AQ13522 171 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 ZBTB8BQ8NAP8 495 aaPredicted RBP7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 C15orf40Q8WUR7 153 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 ARV1Q9H2C2 271 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 ZNF331Q9NQX6 463 aaPredicted RBP7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 MRPL16Q9NX20 251 aaKnown RBP7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 PGPEP1Q9NXJ5 209 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 CACFD1Q9UGQ2 172 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 RABL2BQ9UNT1 228 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 KLF12Q9Y4X4 402 aa7.95□□□□□ -1.14
NSMCE1-202ENST00000561960 TRAV5A0A0B4J249 113 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 MED6O75586 246 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 SCGB1D2O95969 90 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 ATP5IP56385 69 aaPredicted RBP7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 SRPXP78539 464 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 MRPS10P82664 201 aaKnown RBP7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 BTN1A1Q13410 526 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 LINC00305Q7Z4B0 112 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 WFDC10BQ8IUB3 73 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 ZNF503Q96F45 646 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 PSENENQ9NZ42 101 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 TP53TG3Q9ULZ0 132 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 FUT9Q9Y231 359 aa7.94□□□□□ -1.14
NSMCE1-202ENST00000561960 H3BQ15 152 aa7.93□□□□□ -1.14
NSMCE1-202ENST00000561960 PAX4O43316 350 aa7.93□□□□□ -1.14
NSMCE1-202ENST00000561960 RPP30P78346 268 aaKnown RBP7.93□□□□□ -1.14
NSMCE1-202ENST00000561960 CD300CQ08708 224 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms