RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 DDTP30046 118 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 TGFBR1P36897 503 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 RAB5CP51148 216 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 HNRNPA3P51991 378 aaKnown RBP3.54□□□□□ -1.84
HERC1-213ENST00000561359 TMEM50BP56557 158 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 TAS2R31P59538 309 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 RPL37AP61513 92 aaKnown RBP3.54□□□□□ -1.84
HERC1-213ENST00000561359 RPS11P62280 158 aaKnown RBP eCLIP3.54□□□□□ -1.84
HERC1-213ENST00000561359 SNRPEP62304 92 aaKnown RBP3.54□□□□□ -1.84
HERC1-213ENST00000561359 P2RY14Q15391 338 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 FAM74A1Q5RGS3 127 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 TRIQKQ629K1 86 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 FOXI2Q6ZQN5 318 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 MRPL52Q86TS9 123 aaKnown RBP3.54□□□□□ -1.84
HERC1-213ENST00000561359 CMTM1Q8IZ96 169 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 Q8N814 137 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 C15orf54Q8N8G6 183 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 ZFP41Q8N8Y5 198 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 OR1S1Q8NH92 325 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 TMEM230Q96A57 120 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 TMEM56Q96MV1 263 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 DERL3Q96Q80 235 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 ABHD1Q96SE0 405 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 GABARAPL3Q9BY60 117 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 SEPSECSQ9HD40 501 aaKnown RBP3.54□□□□□ -1.84
HERC1-213ENST00000561359 DNAJC4Q9NNZ3 241 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 NRN1Q9NPD7 142 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 NDUFA4L2Q9NRX3 87 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 PSORS1C1Q9UIG5 152 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 CARHSP1Q9Y2V2 147 aaKnown RBP3.54□□□□□ -1.84
HERC1-213ENST00000561359 OR2W1Q9Y3N9 320 aa3.54□□□□□ -1.84
HERC1-213ENST00000561359 TIMM8BQ9Y5J9 83 aaPredicted RBP3.54□□□□□ -1.84
HERC1-213ENST00000561359 IGKV1D-13A0A0B4J2D9 117 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 LRCOL1A6NCL2 159 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 HMSDA8MTL9 139 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 DISC1C4P0D8 188 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 G3V3Q6 166 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 TSTD3H0UI37 97 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 DLEU1O43261 78 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 TNFSF12O43508 249 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 ADAP1O75689 374 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 LIMS3P0CW19 117 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 LIMS4P0CW20 117 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 IGKV1-13P0DP09 117 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 HTN1P15515 57 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 AZU1P20160 251 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 G0S2P27469 103 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 TSPOP30536 169 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 S100A11P31949 105 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 CDKN1BP46527 198 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 PAX9P55771 341 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 ERVK-16P61578 105 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 QRFPP83859 136 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 PYDC2Q56P42 97 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 FAM78BQ5VT40 261 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 EBLN2Q6P2I7 272 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 TMED4Q7Z7H5 227 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 TPRA1Q86W33 373 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 FAM89BQ8N5H3 189 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 BPIFCQ8NFQ6 507 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 OR52I1Q8NGK6 324 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 COQ8AQ8NI60 647 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 STOML3Q8TAV4 291 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 PGLYRP3Q96LB9 341 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 IGF2BP2-AS1Q96M15 143 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 CHAC1Q9BUX1 264 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 NOP10Q9NPE3 64 aaKnown RBP3.53□□□□□ -1.84
HERC1-213ENST00000561359 CLEC2DQ9UHP7 191 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 NSG2Q9Y328 171 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 OR51B2Q9Y5P1 312 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 LY96Q9Y6Y9 160 aa3.53□□□□□ -1.84
HERC1-213ENST00000561359 A0A096LPF7 62 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 LOC100506127A0A0U1RQW1 187 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 PLAC8L1A1L4L8 177 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 COLCA2A8K830 154 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 FOXI3A8MTJ6 420 aaPredicted RBP3.52□□□□□ -1.85
HERC1-213ENST00000561359 F6UB75 175 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 H3BNG1 76 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 MFNGO00587 321 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 RBFOX2O43251 390 aaKnown RBP eCLIP3.52□□□□□ -1.85
HERC1-213ENST00000561359 WBP4O75554 376 aaKnown RBP3.52□□□□□ -1.85
HERC1-213ENST00000561359 TMEM50AO95807 157 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 HPRT1P00492 218 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 INSP01308 110 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 HOXB5P09067 269 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 GIPP09681 153 aaPredicted RBP3.52□□□□□ -1.85
HERC1-213ENST00000561359 METTL15P1P0C7V9 234 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 EVI2AP22794 236 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 SDC2P34741 201 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 ID1P41134 155 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 FABP9Q0Z7S8 132 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 EIF4EBP1Q13541 118 aaPredicted RBP3.52□□□□□ -1.85
HERC1-213ENST00000561359 PEA15Q15121 130 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 POU2AF1Q16633 256 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 ACOT6Q3I5F7 207 aaPredicted RBP3.52□□□□□ -1.85
HERC1-213ENST00000561359 C1orf100Q5SVJ3 147 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 SPATA31B1PQ5VZV4 182 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 SIGLEC15Q6ZMC9 328 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 OR56B1Q8NGI3 324 aa3.52□□□□□ -1.85
HERC1-213ENST00000561359 PCNPQ8WW12 178 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms