RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TMEM14CQ9P0S9 112 aa8□□□□□ -1.13
TPM1-229ENST00000561242 FBN3Q75N90 2809 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 K7EQM0 130 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 BCL2L11O43521 198 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 CXorf1O96002 111 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 CA1P00915 261 aaPredicted RBP7.99□□□□□ -1.13
TPM1-229ENST00000561242 IGKV3-20P01619 116 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 C1QBP02746 253 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 NBEAP1P0C6P0 100 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 TSPOP30536 169 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 PATE2Q6UY27 113 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 FOXI2Q6ZQN5 318 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 DCANP1Q8TF63 244 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 RCHY1Q96PM5 261 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 TMEM208Q9BTX3 173 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 HRH4Q9H3N8 390 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 WFDC1Q9HC57 220 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 WNK1Q9H4A3 2382 aa7.99□□□□□ -1.13
TPM1-229ENST00000561242 A0A087X0K7 114 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 TRAV5A0A0B4J249 113 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 KNCNA6PVL3 124 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 UMAD1C9J7I0 102 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 AMBPP02760 352 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 HIST1H1AQ02539 215 aaPredicted RBP7.98□□□□□ -1.13
TPM1-229ENST00000561242 PDE6HQ13956 83 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 PSG3Q16557 428 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 HAGHQ16775 308 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 MIR17HGQ75NE6 70 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 RXFP4Q8TDU9 374 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 TMEM167BQ9NRX6 74 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 C19orf73Q9NVV2 129 aa7.98□□□□□ -1.13
TPM1-229ENST00000561242 RNF222A6NCQ9 220 aa7.97□□□□□ -1.13
TPM1-229ENST00000561242 SPRY2O43597 315 aa7.97□□□□□ -1.13
TPM1-229ENST00000561242 SNRPCP09234 159 aaKnown RBP7.97□□□□□ -1.13
TPM1-229ENST00000561242 OR10J4P0C629 311 aa7.97□□□□□ -1.13
TPM1-229ENST00000561242 ODF3L2Q3SX64 289 aa7.97□□□□□ -1.13
TPM1-229ENST00000561242 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.97□□□□□ -1.13
TPM1-229ENST00000561242 BAP18Q8IXM2 172 aa7.97□□□□□ -1.13
TPM1-229ENST00000561242 IL17DQ8TAD2 202 aa7.97□□□□□ -1.13
TPM1-229ENST00000561242 RPUSD4Q96CM3 377 aaKnown RBP7.97□□□□□ -1.13
TPM1-229ENST00000561242 WFDC10AQ9H1F0 79 aa7.97□□□□□ -1.13
TPM1-229ENST00000561242 GOLT1BQ9Y3E0 138 aa7.97□□□□□ -1.13
TPM1-229ENST00000561242 U3KQK5 164 aa7.97□□□□□ -1.13
TPM1-229ENST00000561242 F6UZH7 168 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 ZNF253O75346 499 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 SEC11BP0C7V7 166 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 RAB5CP51148 216 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 RANP62826 216 aaKnown RBP7.96□□□□□ -1.14
TPM1-229ENST00000561242 GCSAMLQ5JQS6 135 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 TMEM78Q5T7P6 136 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 Q6ZWC4 215 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 SLC51BQ86UW2 128 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 SBSPONQ8IVN8 264 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 LYPD1Q8N2G4 141 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 ST6GAL2Q96JF0 529 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 SAV1Q9H4B6 383 aaPredicted RBP7.96□□□□□ -1.14
TPM1-229ENST00000561242 BOLA1Q9Y3E2 137 aa7.96□□□□□ -1.14
TPM1-229ENST00000561242 TRBV19A0A075B6N1 114 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 CTXND1A0A1B0GTU2 59 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 RBMY1BA6NDE4 496 aaKnown RBP7.95□□□□□ -1.14
TPM1-229ENST00000561242 RBMY1EA6NEQ0 496 aaKnown RBP7.95□□□□□ -1.14
TPM1-229ENST00000561242 H3BTX0 84 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 IFNA7P01567 189 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 RBMY1DP0C7P1 496 aaKnown RBP7.95□□□□□ -1.14
TPM1-229ENST00000561242 PYYP10082 97 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 PPT1P50897 306 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 ICAM4Q14773 271 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 DPPA3Q6W0C5 159 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 FAM213BQ8TBF2 198 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 RAB24Q969Q5 203 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 MRPL53Q96EL3 112 aaKnown RBP7.95□□□□□ -1.14
TPM1-229ENST00000561242 RARRES2Q99969 163 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 NDFIP1Q9BT67 221 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 SLC25A2Q9BXI2 301 aa7.95□□□□□ -1.14
TPM1-229ENST00000561242 ZNF331Q9NQX6 463 aaPredicted RBP7.95□□□□□ -1.14
TPM1-229ENST00000561242 DNHD1Q96M86 4753 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 IGHV3OR16-12A0A075B7B8 117 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 PGPA6NDG6 321 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 H3BMM0 161 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 HMGB3O15347 200 aaKnown RBP7.94□□□□□ -1.14
TPM1-229ENST00000561242 HLA-DRB4P13762 266 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 LEPP41159 167 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 IGFL4Q6B9Z1 124 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 FAM24BQ8N5W8 94 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 RNF182Q8N6D2 247 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 OR8A1Q8NGG7 326 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 LINC00477Q96M19 166 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 NKX6-2Q9C056 277 aaPredicted RBP7.94□□□□□ -1.14
TPM1-229ENST00000561242 RPH3ALQ9UNE2 315 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 TP53TG1Q9Y2A0 90 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 HLA-DRB4X5D2U9 266 aa7.94□□□□□ -1.14
TPM1-229ENST00000561242 A0A0J9YX75 114 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 IFNA1P01562 189 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 HBE1P02100 147 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 SLC25A5P05141 298 aaKnown RBP7.93□□□□□ -1.14
TPM1-229ENST00000561242 H2AFB1P0C5Y9 115 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 IGLC2P0DOY2 106 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 ZNF124Q15973 351 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 DEFB135Q30KP9 77 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 LGALSLQ3ZCW2 172 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms