RNA–Protein interactions for RNA: ENST00000560962.5

USP3-AS1-208, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 1,807 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-208ENST00000560962 OR5I1Q13606 314 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 CMTM2Q8TAZ6 248 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 IGF2BP2-AS1Q96M15 143 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 YPEL4Q96NS1 127 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 ATG101Q9BSB4 218 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 LY96Q9Y6Y9 160 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 CXorf65A6NEN9 183 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 H7BYZ3 331 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 GGCTO75223 188 aaKnown RBP13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 TCRAP04437 139 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 TAS2R60P59551 318 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 Q71RC1 249 aaPredicted RBP13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 NHLRC2Q8NBF2 726 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 ANAPC16Q96DE5 110 aa13.67□□□□□ -0.22
USP3-AS1-208ENST00000560962 ZNF320A2RRD8 509 aa13.66□□□□□ -0.22
USP3-AS1-208ENST00000560962 ZNF785A8K8V0 405 aa13.66□□□□□ -0.22
USP3-AS1-208ENST00000560962 INAFM1C9JVW0 142 aa13.66□□□□□ -0.22
USP3-AS1-208ENST00000560962 CRYBA1P05813 215 aa13.66□□□□□ -0.22
USP3-AS1-208ENST00000560962 ELOBQ15370 118 aa13.66□□□□□ -0.22
USP3-AS1-208ENST00000560962 KLHDC1Q8N7A1 406 aa13.66□□□□□ -0.22
USP3-AS1-208ENST00000560962 SFRP2Q96HF1 295 aa13.66□□□□□ -0.22
USP3-AS1-208ENST00000560962 U3KQE9 123 aa13.66□□□□□ -0.22
USP3-AS1-208ENST00000560962 IGLV2-8P01709 118 aa13.65□□□□□ -0.22
USP3-AS1-208ENST00000560962 UBE2G1P62253 170 aa13.65□□□□□ -0.22
USP3-AS1-208ENST00000560962 PDE6HQ13956 83 aa13.65□□□□□ -0.22
USP3-AS1-208ENST00000560962 TMEM183BQ1AE95 376 aa13.65□□□□□ -0.22
USP3-AS1-208ENST00000560962 LYPD1Q8N2G4 141 aa13.65□□□□□ -0.22
USP3-AS1-208ENST00000560962 UBE2E2Q96LR5 201 aa13.65□□□□□ -0.22
USP3-AS1-208ENST00000560962 JMJD8Q96S16 334 aa13.65□□□□□ -0.22
USP3-AS1-208ENST00000560962 FLNBO75369 2602 aaKnown RBP13.65□□□□□ -0.22
USP3-AS1-208ENST00000560962 TGIF2-C20orf24A0A0A6YYL0 155 aa13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 MGST1P10620 155 aaKnown RBP13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 GOLT1AQ6ZVE7 132 aa13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 BAGE2Q86Y30 109 aa13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 M0R3E3 92 aa13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 CXCL1P09341 107 aa13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 GALR1P47211 349 aa13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 C1orf194Q5T5A4 169 aa13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 IGFL4Q6B9Z1 124 aa13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 C16orf95Q9H693 158 aa13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 AAMDCQ9H7C9 122 aa13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 KLF12Q9Y4X4 402 aa13.64□□□□□ -0.23
USP3-AS1-208ENST00000560962 MTORP42345 2549 aa13.63□□□□□ -0.23
USP3-AS1-208ENST00000560962 PSG9Q00887 426 aa13.63□□□□□ -0.23
USP3-AS1-208ENST00000560962 OR10G8Q8NGN5 311 aa13.63□□□□□ -0.23
USP3-AS1-208ENST00000560962 TMEM190Q8WZ59 177 aa13.63□□□□□ -0.23
USP3-AS1-208ENST00000560962 GPR82Q96P67 336 aa13.63□□□□□ -0.23
USP3-AS1-208ENST00000560962 HIVEP1P15822 2718 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 TRAV8-1A0A0A6YYK1 113 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 GCGP01275 180 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 LGALS1P09382 135 aaKnown RBP13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 RAB5AP20339 215 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 WIPF2Q8TF74 440 aaPredicted RBP13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 CUBNO60494 3623 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 PPP1R2P9O14990 202 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 HLA-DMBP28068 263 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 ERVFC1-1P60608 527 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 TM4SF20Q53R12 229 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 C16orf54Q6UWD8 224 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 FMC1Q96HJ9 113 aa13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 RNASE7Q9H1E1 156 aaKnown RBP13.62□□□□□ -0.23
USP3-AS1-208ENST00000560962 A0A087X0K7 114 aa13.61□□□□□ -0.23
USP3-AS1-208ENST00000560962 DIRC3C9JPN6 131 aa13.61□□□□□ -0.23
USP3-AS1-208ENST00000560962 S100A9P06702 114 aaKnown RBP13.61□□□□□ -0.23
USP3-AS1-208ENST00000560962 PFN1P07737 140 aaKnown RBP13.61□□□□□ -0.23
USP3-AS1-208ENST00000560962 GPHB5Q86YW7 130 aa13.61□□□□□ -0.23
USP3-AS1-208ENST00000560962 RPEL1Q2QD12 228 aa13.6□□□□□ -0.23
USP3-AS1-208ENST00000560962 FAM106AQ4KMX7 169 aa13.6□□□□□ -0.23
USP3-AS1-208ENST00000560962 TCTEX1D4Q5JR98 221 aa13.6□□□□□ -0.23
USP3-AS1-208ENST00000560962 GLMPQ8WWB7 406 aa13.6□□□□□ -0.23
USP3-AS1-208ENST00000560962 ZNF331Q9NQX6 463 aaPredicted RBP13.6□□□□□ -0.23
USP3-AS1-208ENST00000560962 S100PP25815 95 aa13.6□□□□□ -0.23
USP3-AS1-208ENST00000560962 CSN1S1P47710 185 aa13.6□□□□□ -0.23
USP3-AS1-208ENST00000560962 CDX1P47902 265 aaPredicted RBP13.6□□□□□ -0.23
USP3-AS1-208ENST00000560962 C18orf65Q6ZTR6 163 aa13.6□□□□□ -0.23
USP3-AS1-208ENST00000560962 PRNTQ86SH4 94 aa13.6□□□□□ -0.23
USP3-AS1-208ENST00000560962 ZNF253O75346 499 aa13.59□□□□□ -0.23
USP3-AS1-208ENST00000560962 CRLF1O75462 422 aa13.59□□□□□ -0.23
USP3-AS1-208ENST00000560962 NDUFA7O95182 113 aa13.59□□□□□ -0.23
USP3-AS1-208ENST00000560962 IGLV2-11P01706 119 aa13.59□□□□□ -0.23
USP3-AS1-208ENST00000560962 FAM3BP58499 235 aaPredicted RBP13.59□□□□□ -0.23
USP3-AS1-208ENST00000560962 LINC01006Q8NI28 216 aa13.59□□□□□ -0.23
USP3-AS1-208ENST00000560962 ASCL2Q99929 193 aa13.59□□□□□ -0.23
USP3-AS1-208ENST00000560962 IGHV4OR15-8A0A075B7B6 117 aa13.58□□□□□ -0.24
USP3-AS1-208ENST00000560962 A0A087WW49 117 aa13.58□□□□□ -0.24
USP3-AS1-208ENST00000560962 ZNF705FA8MVS1 300 aaPredicted RBP13.58□□□□□ -0.24
USP3-AS1-208ENST00000560962 LTAP01374 205 aa13.58□□□□□ -0.24
USP3-AS1-208ENST00000560962 EDN2P20800 178 aa13.58□□□□□ -0.24
USP3-AS1-208ENST00000560962 RPS10P46783 165 aaKnown RBP13.58□□□□□ -0.24
USP3-AS1-208ENST00000560962 PRR27Q6MZM9 219 aa13.58□□□□□ -0.24
USP3-AS1-208ENST00000560962 Q86TA4 180 aa13.58□□□□□ -0.24
USP3-AS1-208ENST00000560962 DAZ1Q9NQZ3 744 aaKnown RBP13.58□□□□□ -0.24
USP3-AS1-208ENST00000560962 SELENOKQ9Y6D0 94 aa13.58□□□□□ -0.24
USP3-AS1-208ENST00000560962 BAHCC1Q9P281 2608 aa13.58□□□□□ -0.24
USP3-AS1-208ENST00000560962 IGHV7-4-1A0A0J9YVY3 117 aa13.57□□□□□ -0.24
USP3-AS1-208ENST00000560962 K7EQM0 130 aa13.57□□□□□ -0.24
USP3-AS1-208ENST00000560962 TCF21O43680 179 aa13.57□□□□□ -0.24
USP3-AS1-208ENST00000560962 HIST2H2BDQ6DRA6 164 aa13.57□□□□□ -0.24
USP3-AS1-208ENST00000560962 RNF182Q8N6D2 247 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms