RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 TMED4Q7Z7H5 227 aa13.13□□□□□ -0.31
CRNDE-210ENST00000560912 PPP1R14DQ9NXH3 145 aa13.13□□□□□ -0.31
CRNDE-210ENST00000560912 RSL24D1Q9UHA3 163 aaKnown RBP13.13□□□□□ -0.31
CRNDE-210ENST00000560912 A0A0J9YY99 117 aa13.12□□□□□ -0.31
CRNDE-210ENST00000560912 MRPS12O15235 138 aaKnown RBP13.12□□□□□ -0.31
CRNDE-210ENST00000560912 HYPMO75409 117 aa13.12□□□□□ -0.31
CRNDE-210ENST00000560912 IL5P05113 134 aa13.12□□□□□ -0.31
CRNDE-210ENST00000560912 LINC00869P0C866 280 aa13.12□□□□□ -0.31
CRNDE-210ENST00000560912 PRB4P10163 310 aaPredicted RBP13.12□□□□□ -0.31
CRNDE-210ENST00000560912 Q6ZRN7 208 aaPredicted RBP13.12□□□□□ -0.31
CRNDE-210ENST00000560912 RPUSD4Q96CM3 377 aaKnown RBP13.12□□□□□ -0.31
CRNDE-210ENST00000560912 SOSTQ9BQB4 213 aa13.12□□□□□ -0.31
CRNDE-210ENST00000560912 ZNF586Q9NXT0 402 aa13.12□□□□□ -0.31
CRNDE-210ENST00000560912 CCDC59Q9P031 241 aaKnown RBP13.12□□□□□ -0.31
CRNDE-210ENST00000560912 STRAPQ9Y3F4 350 aaKnown RBP13.12□□□□□ -0.31
CRNDE-210ENST00000560912 EPM2AB3EWF7 344 aa13.11□□□□□ -0.31
CRNDE-210ENST00000560912 ADAP1O75689 374 aa13.11□□□□□ -0.31
CRNDE-210ENST00000560912 VAMP1P23763 118 aa13.11□□□□□ -0.31
CRNDE-210ENST00000560912 KIR3DS1Q14943 382 aa13.11□□□□□ -0.31
CRNDE-210ENST00000560912 DYNC2LI1Q8TCX1 351 aa13.11□□□□□ -0.31
CRNDE-210ENST00000560912 OR5G3P0C626 314 aa13.1□□□□□ -0.31
CRNDE-210ENST00000560912 CXCL2P19875 107 aa13.1□□□□□ -0.31
CRNDE-210ENST00000560912 LINC00315P59091 139 aa13.1□□□□□ -0.31
CRNDE-210ENST00000560912 SMCO3A2RU48 225 aa13.09□□□□□ -0.31
CRNDE-210ENST00000560912 PMS2P5A8MQ11 134 aa13.09□□□□□ -0.31
CRNDE-210ENST00000560912 SFT2D2O95562 160 aa13.09□□□□□ -0.31
CRNDE-210ENST00000560912 SELENOTP62341 195 aa13.09□□□□□ -0.31
CRNDE-210ENST00000560912 DLK1P80370 383 aa13.09□□□□□ -0.31
CRNDE-210ENST00000560912 GFI1BQ5VTD9 330 aa13.09□□□□□ -0.31
CRNDE-210ENST00000560912 PATE2Q6UY27 113 aa13.09□□□□□ -0.31
CRNDE-210ENST00000560912 TRIM63Q969Q1 353 aa13.09□□□□□ -0.31
CRNDE-210ENST00000560912 PARD6GQ9BYG4 376 aaPredicted RBP13.09□□□□□ -0.31
CRNDE-210ENST00000560912 ZNF331Q9NQX6 463 aaPredicted RBP13.09□□□□□ -0.31
CRNDE-210ENST00000560912 FAT1Q14517 4588 aa13.09□□□□□ -0.31
CRNDE-210ENST00000560912 GAGE12BA1L429 117 aa13.08□□□□□ -0.32
CRNDE-210ENST00000560912 K7EPK0 472 aa13.08□□□□□ -0.32
CRNDE-210ENST00000560912 GAGE7O76087 117 aa13.08□□□□□ -0.32
CRNDE-210ENST00000560912 RLN2P04090 185 aa13.08□□□□□ -0.32
CRNDE-210ENST00000560912 HOXB5P09067 269 aa13.08□□□□□ -0.32
CRNDE-210ENST00000560912 GAGE12FP0CL80 117 aa13.08□□□□□ -0.32
CRNDE-210ENST00000560912 GAGE12GP0CL81 117 aa13.08□□□□□ -0.32
CRNDE-210ENST00000560912 GAGE12IP0CL82 117 aa13.08□□□□□ -0.32
CRNDE-210ENST00000560912 FAUP35544 74 aaKnown RBP13.08□□□□□ -0.32
CRNDE-210ENST00000560912 PPP1R1AQ13522 171 aa13.08□□□□□ -0.32
CRNDE-210ENST00000560912 LCN15Q6UWW0 184 aa13.08□□□□□ -0.32
CRNDE-210ENST00000560912 LRRC20Q8TCA0 184 aa13.08□□□□□ -0.32
CRNDE-210ENST00000560912 S100A7AQ86SG5 101 aa13.07□□□□□ -0.32
CRNDE-210ENST00000560912 CCDC28AQ8IWP9 274 aa13.07□□□□□ -0.32
CRNDE-210ENST00000560912 SLC50A1Q9BRV3 221 aa13.07□□□□□ -0.32
CRNDE-210ENST00000560912 ARV1Q9H2C2 271 aa13.07□□□□□ -0.32
CRNDE-210ENST00000560912 TMPRSS5Q9H3S3 457 aa13.07□□□□□ -0.32
CRNDE-210ENST00000560912 SNURFLB1AK76 121 aa13.06□□□□□ -0.32
CRNDE-210ENST00000560912 ID3Q02535 119 aa13.06□□□□□ -0.32
CRNDE-210ENST00000560912 VSIG2Q96IQ7 327 aa13.06□□□□□ -0.32
CRNDE-210ENST00000560912 ARL6Q9H0F7 186 aa13.06□□□□□ -0.32
CRNDE-210ENST00000560912 RNF24Q9Y225 148 aa13.06□□□□□ -0.32
CRNDE-210ENST00000560912 A0A096LPF7 62 aa13.05□□□□□ -0.32
CRNDE-210ENST00000560912 FNDC10F2Z333 226 aa13.05□□□□□ -0.32
CRNDE-210ENST00000560912 CCNKO75909 580 aa13.05□□□□□ -0.32
CRNDE-210ENST00000560912 INAFM2P0DMQ5 153 aa13.05□□□□□ -0.32
CRNDE-210ENST00000560912 TNFSF8P32971 234 aa13.05□□□□□ -0.32
CRNDE-210ENST00000560912 POLR2GP62487 172 aaKnown RBP eCLIP13.05□□□□□ -0.32
CRNDE-210ENST00000560912 LYPD1Q8N2G4 141 aa13.05□□□□□ -0.32
CRNDE-210ENST00000560912 SLC25A21Q9BQT8 299 aaPredicted RBP13.05□□□□□ -0.32
CRNDE-210ENST00000560912 MRPS26Q9BYN8 205 aaKnown RBP13.05□□□□□ -0.32
CRNDE-210ENST00000560912 SLIRPQ9GZT3 109 aaKnown RBP13.05□□□□□ -0.32
CRNDE-210ENST00000560912 PSENENQ9NZ42 101 aa13.05□□□□□ -0.32
CRNDE-210ENST00000560912 MYCBP2O75592 4640 aa13.05□□□□□ -0.32
CRNDE-210ENST00000560912 FABP12A6NFH5 140 aa13.04□□□□□ -0.32
CRNDE-210ENST00000560912 PRAC2D3DTV9 90 aa13.04□□□□□ -0.32
CRNDE-210ENST00000560912 SLC17A3O00476 420 aa13.04□□□□□ -0.32
CRNDE-210ENST00000560912 XGP55808 180 aa13.04□□□□□ -0.32
CRNDE-210ENST00000560912 DAZ2Q13117 558 aaKnown RBP13.04□□□□□ -0.32
CRNDE-210ENST00000560912 Q6ZTI0 123 aa13.04□□□□□ -0.32
CRNDE-210ENST00000560912 ZBTB8BQ8NAP8 495 aaPredicted RBP13.04□□□□□ -0.32
CRNDE-210ENST00000560912 RAB2BQ8WUD1 216 aa13.04□□□□□ -0.32
CRNDE-210ENST00000560912 FLG2Q5D862 2391 aaPredicted RBP13.03□□□□□ -0.32
CRNDE-210ENST00000560912 ANXA7P20073 488 aaKnown RBP13.03□□□□□ -0.32
CRNDE-210ENST00000560912 AP3S2P59780 193 aa13.03□□□□□ -0.32
CRNDE-210ENST00000560912 RRAS2P62070 204 aaPredicted RBP13.03□□□□□ -0.32
CRNDE-210ENST00000560912 SLC38A11Q08AI6 406 aa13.03□□□□□ -0.32
CRNDE-210ENST00000560912 PXDC1Q5TGL8 231 aa13.03□□□□□ -0.32
CRNDE-210ENST00000560912 CDPF1Q6NVV7 123 aa13.03□□□□□ -0.32
CRNDE-210ENST00000560912 TMEM14EPQ6UXP3 125 aa13.03□□□□□ -0.32
CRNDE-210ENST00000560912 CCDC190Q86UF4 302 aa13.03□□□□□ -0.32
CRNDE-210ENST00000560912 C18orf15Q96N68 181 aa13.03□□□□□ -0.32
CRNDE-210ENST00000560912 ODF3Q96PU9 254 aa13.03□□□□□ -0.32
CRNDE-210ENST00000560912 BCL7BQ9BQE9 202 aa13.03□□□□□ -0.32
CRNDE-210ENST00000560912 NPVFQ9HCQ7 196 aa13.03□□□□□ -0.32
CRNDE-210ENST00000560912 PGPEP1Q9NXJ5 209 aa13.03□□□□□ -0.32
CRNDE-210ENST00000560912 VPS13BQ7Z7G8 4022 aa13.02□□□□□ -0.32
CRNDE-210ENST00000560912 LINC00854A0A1B0GVQ3 168 aa13.02□□□□□ -0.33
CRNDE-210ENST00000560912 SSSCA1O60232 199 aa13.02□□□□□ -0.33
CRNDE-210ENST00000560912 SNRPCP09234 159 aaKnown RBP13.02□□□□□ -0.33
CRNDE-210ENST00000560912 FUSP35637 526 aaKnown RBP eCLIP13.02□□□□□ -0.33
CRNDE-210ENST00000560912 C4orf46Q504U0 113 aa13.02□□□□□ -0.33
CRNDE-210ENST00000560912 TEPPQ6URK8 271 aa13.02□□□□□ -0.33
CRNDE-210ENST00000560912 LINC00305Q7Z4B0 112 aa13.02□□□□□ -0.33
CRNDE-210ENST00000560912 TOMM5Q8N4H5 51 aa13.02□□□□□ -0.33
CRNDE-210ENST00000560912 SMIM8Q96KF7 97 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms