RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 RNF138Q8WVD3 245 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 IL1F10Q8WWZ1 152 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 BORCS8Q96FH0 119 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 SPANXA1Q9NS26 97 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 IDI2-AS1Q9NZ38 188 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 GON4LQ3T8J9 2241 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 A0A1B0GXF2 115 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 A0A1W2PQD3 144 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 H7C1H1 209 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 G6PCP35575 357 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 Q6ZS92 163 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 WWC2-AS2Q96NR7 200 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 FAM173AQ9BQD7 235 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 ZNF256Q9Y2P7 627 aaPredicted RBP5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 KNL1Q8NG31 2342 aa5.31□□□□□ -1.56
TSPAN3-209ENST00000560715 A0A1B0GWB2 263 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 RBMY1BA6NDE4 496 aaKnown RBP5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 RBMY1EA6NEQ0 496 aaKnown RBP5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 IGLV2-14P01704 120 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 RBMY1DP0C7P1 496 aaKnown RBP5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 RBMY1A1P0DJD3 496 aaKnown RBP5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 CT45A10P0DMU9 189 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 FXYD2P54710 66 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 PLP2Q04941 152 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 MLANAQ16655 118 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 ZADH2Q8N4Q0 377 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 IGF2BP2-AS1Q96M15 143 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 UNC13CQ8NB66 2214 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 CENPVL3A0A0U1RRI6 287 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 IGLL5B9A064 214 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 CCDC179H3BU77 68 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 K7ERJ3 54 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 PRTN3P24158 256 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 FOXA3P55318 350 aaPredicted RBP5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 Q6ZR03 302 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 FAM231DQ6ZW35 169 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 PRELID3AQ96N28 172 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 ZNF747Q9BV97 191 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 PPDPFQ9H3Y8 114 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 MAP1LC3AQ9H492 121 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 EXPH5Q8NEV8 1989 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 IGLV9-49A0A0B4J1Y8 123 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 CCL21O00585 134 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 ZG16O60844 167 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 NCR2O95944 276 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 FAM106AQ4KMX7 169 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 ZNF441Q8N8Z8 693 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 ZNF355PQ9NSJ1 428 aa5.3□□□□□ -1.56
TSPAN3-209ENST00000560715 IGLV3-12A0A075B6K2 115 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 NCBP2LA6PVI3 153 aaKnown RBP5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 FOXH1O75593 365 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 P0C879 139 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 DIAPH2-AS1Q14236 149 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 RSPO1Q2MKA7 263 aaPredicted RBP5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 MIC13Q5XKP0 118 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 KIR2DL4Q99706 377 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 HIGD1BQ9P298 99 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 RP1P56715 2156 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 MYO7BQ6PIF6 2116 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 NCOA6Q14686 2063 aaPredicted RBP5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 A8MWL6 223 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 NDUFV3P56181 108 aaKnown RBP5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 HILS1P60008 231 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 HBBP68871 147 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 FOXF2Q12947 444 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 TMEM178AQ8NBL3 297 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 MGST2Q99735 147 aa5.29□□□□□ -1.56
TSPAN3-209ENST00000560715 PI4KAP42356 2102 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 MED12LQ86YW9 2145 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 LY6G6EA0A0G2JKS1 128 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 HIGD1CA8MV81 97 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 M0R135 149 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 AMTNQ6UX39 209 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 TREML4Q6UXN2 200 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 NFE4Q86UQ8 179 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 ZNF799Q96GE5 643 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 Q9HAA7 133 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 U3KQA8 63 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 SUB1P53999 127 aaKnown RBP eCLIP5.28□□□□□ -1.564e-13■■■■■ 56.5
TSPAN3-209ENST00000560715 FBXW4P57775 412 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 LGALS9BQ3B8N2 356 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 LGALS9CQ6DKI2 356 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 PVRIGQ6DKI7 326 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 GUSBP11Q6P575 273 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 PCP2Q8IVA1 136 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 TMEM167BQ9NRX6 74 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 NHP2Q9NX24 153 aaKnown RBP5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 F11RQ9Y624 299 aaKnown RBP5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 ASXL3Q9C0F0 2248 aa5.28□□□□□ -1.56
TSPAN3-209ENST00000560715 NCOR1O75376 2440 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 TRBV6-6A0A0A6YYG2 114 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 IGHV5-10-1A0A0J9YXX1 117 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 TCRBV4S1A1TA0A5B7 111 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 FNDC10F2Z333 226 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 SLC25A5P05141 298 aaKnown RBP5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 SOX21Q9Y651 276 aaPredicted RBP5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 CACNA1EQ15878 2313 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 BDP1A6H8Y1 2624 aa5.27□□□□□ -1.57
TSPAN3-209ENST00000560715 TRAV5A0A0B4J249 113 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms