RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CHTOPQ9Y3Y2 248 aaKnown RBP4.03□□□□□ -1.76
HERC1-208ENST00000560462 ICOSQ9Y6W8 199 aa4.03□□□□□ -1.76
HERC1-208ENST00000560462 KIF25-AS1Q9Y6Z4 181 aa4.03□□□□□ -1.76
HERC1-208ENST00000560462 V9GY05 133 aa4.03□□□□□ -1.76
HERC1-208ENST00000560462 TRBV7-9A0A0J9YWB2 115 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 SERTM2A0A1B0GWG4 89 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 FAM74A7A6NL05 159 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 IBA57-AS1B1ANH7 110 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 HIST1H1DP16402 221 aaKnown RBP4.02□□□□□ -1.77
HERC1-208ENST00000560462 RAB3BP20337 219 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 GATA2P23769 480 aaPredicted RBP4.02□□□□□ -1.77
HERC1-208ENST00000560462 GADD45AP24522 165 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 MYL9P24844 172 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 RANBP1P43487 201 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 P2RY1P47900 373 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 SERPINB10P48595 397 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 HSPA13P48723 471 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 EIF2B2P49770 351 aaKnown RBP4.02□□□□□ -1.77
HERC1-208ENST00000560462 PSG9Q00887 426 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 FAM74A3Q4VXF1 159 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 TOMM20LQ6UXN7 152 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 SMIM29Q86T20 159 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 OR10R2Q8NGX6 335 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 OR10J5Q8NHC4 309 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 PRAC1Q96KF2 57 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 IGF2BP2-AS1Q96M15 143 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 NXF2Q9GZY0 626 aaKnown RBP4.02□□□□□ -1.77
HERC1-208ENST00000560462 VCX3BQ9H321 246 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 ACOT13Q9NPJ3 140 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 NDUFB11Q9NX14 153 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 SDHAF2Q9NX18 166 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 RAB22AQ9UL26 194 aa4.02□□□□□ -1.77
HERC1-208ENST00000560462 TRBV6-7A0A0A0MS04 114 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 TRAV1-2A0A0B4J238 106 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 IFITM5A6NNB3 132 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 BOLA2-SMG1P6H3BVE0 249 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 PDCD5O14737 125 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 KBTBD11O94819 623 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 NPPCP23582 126 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 DEFB1P60022 68 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 GABARAPL2P60520 117 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 B2MP61769 119 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 ARFRP1Q13795 201 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 SPANXN2Q5MJ10 180 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 LINC00242Q5T6M2 205 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 C22orf42Q6IC83 251 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 SPINK6Q6UWN8 80 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 VKORC1L1Q8N0U8 176 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 C15orf54Q8N8G6 183 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 Q8N976 141 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 VSTM2AQ8TAG5 236 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 GINS4Q9BRT9 223 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 DCUN1D5Q9BTE7 237 aa4.01□□□□□ -1.77
HERC1-208ENST00000560462 SAV1Q9H4B6 383 aaPredicted RBP4.01□□□□□ -1.77
HERC1-208ENST00000560462 RBM7Q9Y580 266 aaKnown RBP4.01□□□□□ -1.77
HERC1-208ENST00000560462 IGKV1D-8A0A087WSZ0 117 aa4□□□□□ -1.77
HERC1-208ENST00000560462 IGHV3-38A0A0C4DH36 116 aa4□□□□□ -1.77
HERC1-208ENST00000560462 TRDV1A0A1B0GX56 115 aa4□□□□□ -1.77
HERC1-208ENST00000560462 IGLC7A0M8Q6 106 aa4□□□□□ -1.77
HERC1-208ENST00000560462 FAM231BA6NCW3 169 aa4□□□□□ -1.77
HERC1-208ENST00000560462 ZNF98A6NK75 572 aa4□□□□□ -1.77
HERC1-208ENST00000560462 PMS2P5A8MQ11 134 aa4□□□□□ -1.77
HERC1-208ENST00000560462 H7C1H1 209 aa4□□□□□ -1.77
HERC1-208ENST00000560462 TAAR5O14804 337 aa4□□□□□ -1.77
HERC1-208ENST00000560462 ELK1P19419 428 aa4□□□□□ -1.77
HERC1-208ENST00000560462 DTYMKP23919 212 aa4□□□□□ -1.77
HERC1-208ENST00000560462 TALDO1P37837 337 aa4□□□□□ -1.77
HERC1-208ENST00000560462 KCNIP4Q6PIL6 250 aa4□□□□□ -1.77
HERC1-208ENST00000560462 FOXI2Q6ZQN5 318 aa4□□□□□ -1.77
HERC1-208ENST00000560462 Q6ZS49 121 aa4□□□□□ -1.77
HERC1-208ENST00000560462 H1FOOQ8IZA3 346 aaPredicted RBP4□□□□□ -1.77
HERC1-208ENST00000560462 SAMD12Q8N8I0 201 aa4□□□□□ -1.77
HERC1-208ENST00000560462 GDPD1Q8N9F7 314 aa4□□□□□ -1.77
HERC1-208ENST00000560462 OR4C5Q8NGB2 326 aa4□□□□□ -1.77
HERC1-208ENST00000560462 BAALCQ8WXS3 180 aa4□□□□□ -1.77
HERC1-208ENST00000560462 C16orf74Q96GX8 76 aa4□□□□□ -1.77
HERC1-208ENST00000560462 ADTRPQ96IZ2 230 aa4□□□□□ -1.77
HERC1-208ENST00000560462 ATG5Q9H1Y0 275 aa4□□□□□ -1.77
HERC1-208ENST00000560462 RAB26Q9ULW5 256 aa4□□□□□ -1.77
HERC1-208ENST00000560462 MUC17Q685J3 4493 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 TMEM235A6NFC5 223 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 ERICH4A6NGS2 130 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 K7EIM0 57 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 WRBO00258 174 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 PHOX2AO14813 284 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 INSP01308 110 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 SNRPCP09234 159 aaKnown RBP3.99□□□□□ -1.77
HERC1-208ENST00000560462 CD36P16671 472 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 NFYAP23511 347 aaPredicted RBP3.99□□□□□ -1.77
HERC1-208ENST00000560462 PSMB9P28065 219 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 RORCP51449 518 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 AP2S1P53680 142 aaPredicted RBP3.99□□□□□ -1.77
HERC1-208ENST00000560462 RPL8P62917 257 aaKnown RBP3.99□□□□□ -1.77
HERC1-208ENST00000560462 IL18Q14116 193 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 ARL6IP1Q15041 203 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 ZNF79Q15937 498 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 OR2B11Q5JQS5 317 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 MUC21Q5SSG8 566 aa3.99□□□□□ -1.77
HERC1-208ENST00000560462 H2BFWTQ7Z2G1 175 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms