RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 RELQ04864 619 aaPredicted RBP8.35□□□□□ -1.07
SNRPA1-211ENST00000560433 BAGE2Q86Y30 109 aa8.35□□□□□ -1.07
SNRPA1-211ENST00000560433 RNF182Q8N6D2 247 aa8.35□□□□□ -1.07
SNRPA1-211ENST00000560433 USMG5Q96IX5 58 aa8.35□□□□□ -1.07
SNRPA1-211ENST00000560433 GAR1Q9NY12 217 aaKnown RBP8.35□□□□□ -1.07
SNRPA1-211ENST00000560433 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 C9JCJ5 164 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 IGHG4P01861 327 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 TM4SF20Q53R12 229 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 C11orf44Q8N8P7 122 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 C5orf17Q8NAS9 161 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 PRDM13Q9H4Q3 707 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 MLXQ9UH92 298 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 ZNF785A8K8V0 405 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 NDUFS6O75380 124 aaKnown RBP8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 RPL7P18124 248 aaKnown RBP8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 SRSF2Q01130 221 aaKnown RBP8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 PRNTQ86SH4 94 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 METTL26Q96S19 204 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 ATG101Q9BSB4 218 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 SERTAD4Q9NUC0 356 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 CDC42EP3Q9UKI2 254 aa8.34□□□□□ -1.07
SNRPA1-211ENST00000560433 HIVEP1P15822 2718 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 A0A0G2JLM5 398 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 H3BUA1 57 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 SPINK4O60575 86 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 PFN1P07737 140 aaKnown RBP8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 SLC35B1P78383 322 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 DEFB136Q30KP8 78 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 LINC00322Q6ZN03 302 aaPredicted RBP8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 OR10G8Q8NGN5 311 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 ANAPC16Q96DE5 110 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 CTDSP1Q9GZU7 261 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 TMEM242Q9NWH2 141 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 IGKV2-40A0A087WW87 121 aaPredicted RBP8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 CXorf65A6NEN9 183 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 GGCTO75223 188 aaKnown RBP8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 IGKV2D-40P01614 121 aaPredicted RBP8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 SRD5A1P18405 259 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 FAM210BQ96KR6 192 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 DUX3Q96PT4 197 aa8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 PEF1Q9UBV8 284 aaKnown RBP8.33□□□□□ -1.08
SNRPA1-211ENST00000560433 LOC105371267A0A1B0GV96 52 aa8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 TCL1AP56279 114 aa8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 TMEM183BQ1AE95 376 aa8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 WNK1Q9H4A3 2382 aa8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 IGLV2-11P01706 119 aa8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 TRGC2P03986 189 aa8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 FRMD6-AS1P0C7T7 363 aa8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 RPL11P62913 178 aaKnown RBP8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 KHDC1LQ5JSQ8 128 aa8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 IBA57Q5T440 356 aaKnown RBP8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 Q6ZSV7 163 aa8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 AAMDCQ9H7C9 122 aa8.32□□□□□ -1.08
SNRPA1-211ENST00000560433 DIRC3C9JPN6 131 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 LY6G6DO95868 133 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 GCGP01275 180 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 TAS2R60P59551 318 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 SETXQ7Z333 2677 aaKnown RBP8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 S100A7AQ86SG5 101 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 KLHDC1Q8N7A1 406 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 V9GYV3 84 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 NIPBLQ6KC79 2804 aaeCLIP8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 PRAC2D3DTV9 90 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 NDUFA4O00483 81 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 DEFB1P60022 68 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 PRR31Q5SQ13 230 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 Q8TAT8 98 aa8.31□□□□□ -1.08
SNRPA1-211ENST00000560433 IGHV4OR15-8A0A075B7B6 117 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 A0A087WW49 117 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 ZNF705GA8MUZ8 300 aaPredicted RBP8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 S100PP25815 95 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 GPR82Q96P67 336 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 ZNF331Q9NQX6 463 aaPredicted RBP8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 PRELID1Q9Y255 219 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 KLF12Q9Y4X4 402 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 SORL1Q92673 2214 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 TMEM238LA0A1B0GVL6 79 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 C1orf196B1AJZ1 125 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 BRI3O95415 125 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 ZNF705DP0CH99 300 aaPredicted RBP8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 ZNF705BP0CI00 300 aaPredicted RBP8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 ERCC8Q13216 396 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 RPEL1Q2QD12 228 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 TCTEX1D4Q5JR98 221 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 NUDT10Q8NFP7 164 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 NUDT11Q96G61 164 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 FMC1Q96HJ9 113 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 C8orf49Q96NF6 230 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 VGLL1Q99990 258 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 RNF24Q9Y225 148 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 LY96Q9Y6Y9 160 aa8.3□□□□□ -1.08
SNRPA1-211ENST00000560433 FN1P02751 2386 aaKnown RBP8.29□□□□□ -1.08
SNRPA1-211ENST00000560433 HAX1O00165 279 aa8.29□□□□□ -1.08
SNRPA1-211ENST00000560433 CHEK1O14757 476 aa8.29□□□□□ -1.08
SNRPA1-211ENST00000560433 LTAP01374 205 aa8.29□□□□□ -1.08
SNRPA1-211ENST00000560433 SYNJ2BPP57105 145 aa8.29□□□□□ -1.08
SNRPA1-211ENST00000560433 PDE6HQ13956 83 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms