RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 RPUSD4Q96CM3 377 aaKnown RBP11.28□□□□□ -0.6
HERC1-207ENST00000560316 EXTL2Q9UBQ6 330 aa11.28□□□□□ -0.6
HERC1-207ENST00000560316 HMCN2Q8NDA2 5059 aa11.28□□□□□ -0.6
HERC1-207ENST00000560316 A0A0B4J2A0 478 aa11.27□□□□□ -0.61
HERC1-207ENST00000560316 VBP1P61758 197 aa11.27□□□□□ -0.61
HERC1-207ENST00000560316 GFI1BQ5VTD9 330 aa11.27□□□□□ -0.61
HERC1-207ENST00000560316 LRRC20Q8TCA0 184 aa11.27□□□□□ -0.61
HERC1-207ENST00000560316 C20orf144Q9BQM9 153 aa11.27□□□□□ -0.61
HERC1-207ENST00000560316 SHANK2-AS3Q9BTD1 123 aa11.27□□□□□ -0.61
HERC1-207ENST00000560316 SHPKQ9UHJ6 478 aa11.27□□□□□ -0.61
HERC1-207ENST00000560316 KCNIP3Q9Y2W7 256 aa11.27□□□□□ -0.61
HERC1-207ENST00000560316 KRTAP29-1A8MX34 341 aaPredicted RBP11.26□□□□□ -0.61
HERC1-207ENST00000560316 DISC1C4P0D8 188 aa11.26□□□□□ -0.61
HERC1-207ENST00000560316 RPL7P18124 248 aaKnown RBP11.26□□□□□ -0.61
HERC1-207ENST00000560316 S100A7P31151 101 aa11.26□□□□□ -0.61
HERC1-207ENST00000560316 TRGV2A0A075B6R0 118 aa11.25□□□□□ -0.61
HERC1-207ENST00000560316 PRSS46E5RG02 174 aa11.25□□□□□ -0.61
HERC1-207ENST00000560316 J3KRW8 73 aa11.25□□□□□ -0.61
HERC1-207ENST00000560316 AKR1C4P17516 323 aa11.25□□□□□ -0.61
HERC1-207ENST00000560316 AKR1C1Q04828 323 aa11.25□□□□□ -0.61
HERC1-207ENST00000560316 MZT2AQ6P582 158 aa11.25□□□□□ -0.61
HERC1-207ENST00000560316 CCDC190Q86UF4 302 aa11.25□□□□□ -0.61
HERC1-207ENST00000560316 HIGD1AQ9Y241 93 aa11.25□□□□□ -0.61
HERC1-207ENST00000560316 A0A087X0K7 114 aa11.24□□□□□ -0.61
HERC1-207ENST00000560316 RAP2BP61225 183 aa11.24□□□□□ -0.61
HERC1-207ENST00000560316 DAZ2Q13117 558 aaKnown RBP11.24□□□□□ -0.61
HERC1-207ENST00000560316 TMEM70Q9BUB7 260 aa11.24□□□□□ -0.61
HERC1-207ENST00000560316 LCE2BO14633 110 aa11.23□□□□□ -0.61
HERC1-207ENST00000560316 PITX3O75364 302 aa11.23□□□□□ -0.61
HERC1-207ENST00000560316 SNRPCP09234 159 aaKnown RBP11.23□□□□□ -0.61
HERC1-207ENST00000560316 OR51S1Q8NGJ8 323 aa11.23□□□□□ -0.61
HERC1-207ENST00000560316 MSRB1Q9NZV6 116 aa11.23□□□□□ -0.61
HERC1-207ENST00000560316 ICOSQ9Y6W8 199 aa11.23□□□□□ -0.61
HERC1-207ENST00000560316 IGLV5-52A0A0A0MRZ9 124 aa11.22□□□□□ -0.61
HERC1-207ENST00000560316 TRAV12-3A0A0B4J271 114 aa11.22□□□□□ -0.61
HERC1-207ENST00000560316 PRAC2D3DTV9 90 aa11.22□□□□□ -0.61
HERC1-207ENST00000560316 HYPMO75409 117 aa11.22□□□□□ -0.61
HERC1-207ENST00000560316 OR5G3P0C626 314 aa11.22□□□□□ -0.61
HERC1-207ENST00000560316 SERTAD4-AS1Q5TG53 156 aa11.22□□□□□ -0.61
HERC1-207ENST00000560316 LYPD5Q6UWN5 251 aa11.22□□□□□ -0.61
HERC1-207ENST00000560316 CYP2G1PQ6ZSU1 146 aa11.22□□□□□ -0.61
HERC1-207ENST00000560316 FUNDC2Q9BWH2 189 aa11.22□□□□□ -0.61
HERC1-207ENST00000560316 FAM30AQ9NZY2 134 aa11.22□□□□□ -0.61
HERC1-207ENST00000560316 TRAV9-2A0A087WT02 112 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 TRGV1A0A0A0MS02 117 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 PMS2P5A8MQ11 134 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 PAX4O43316 350 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 ZNF324O75467 553 aaPredicted RBP11.21□□□□□ -0.61
HERC1-207ENST00000560316 IL5P05113 134 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 AKAIN1P0CW23 69 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 SSBP1Q04837 148 aaKnown RBP11.21□□□□□ -0.61
HERC1-207ENST00000560316 ACOT7LQ6ZUV0 252 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 SYT8Q8NBV8 401 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 C15orf40Q8WUR7 153 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 PRRT1Q99946 306 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 GSN-AS1Q9NRJ2 163 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 FUT9Q9Y231 359 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 LY96Q9Y6Y9 160 aa11.21□□□□□ -0.61
HERC1-207ENST00000560316 DNAH8Q96JB1 4490 aa11.2□□□□□ -0.62
HERC1-207ENST00000560316 NPIPB6E9PJ23 425 aa11.2□□□□□ -0.62
HERC1-207ENST00000560316 WRBO00258 174 aa11.2□□□□□ -0.62
HERC1-207ENST00000560316 MRPS12O15235 138 aaKnown RBP11.2□□□□□ -0.62
HERC1-207ENST00000560316 LINC00869P0C866 280 aa11.2□□□□□ -0.62
HERC1-207ENST00000560316 RPP30P78346 268 aaKnown RBP11.2□□□□□ -0.62
HERC1-207ENST00000560316 SPANXN5Q5MJ07 72 aa11.2□□□□□ -0.62
HERC1-207ENST00000560316 CLVS1Q8IUQ0 354 aaPredicted RBP11.2□□□□□ -0.62
HERC1-207ENST00000560316 LINC00467Q9BRT7 94 aa11.2□□□□□ -0.62
HERC1-207ENST00000560316 ZNF331Q9NQX6 463 aaPredicted RBP11.2□□□□□ -0.62
HERC1-207ENST00000560316 LINC00854A0A1B0GVQ3 168 aa11.19□□□□□ -0.62
HERC1-207ENST00000560316 SMCO3A2RU48 225 aa11.19□□□□□ -0.62
HERC1-207ENST00000560316 IGHV3-53P01767 116 aa11.19□□□□□ -0.62
HERC1-207ENST00000560316 ANXA7P20073 488 aaKnown RBP11.19□□□□□ -0.62
HERC1-207ENST00000560316 C11orf72Q8NBR9 251 aa11.19□□□□□ -0.62
HERC1-207ENST00000560316 ZNF431Q8TF32 576 aaPredicted RBP11.19□□□□□ -0.62
HERC1-207ENST00000560316 AP3S1Q92572 193 aa11.19□□□□□ -0.62
HERC1-207ENST00000560316 PYGO2Q9BRQ0 406 aa11.19□□□□□ -0.62
HERC1-207ENST00000560316 VCX3AQ9NNX9 186 aa11.19□□□□□ -0.62
HERC1-207ENST00000560316 H3BP45 60 aa11.18□□□□□ -0.62
HERC1-207ENST00000560316 H3BTX0 84 aa11.18□□□□□ -0.62
HERC1-207ENST00000560316 MED6O75586 246 aa11.18□□□□□ -0.62
HERC1-207ENST00000560316 PLA2G1BP04054 148 aaKnown RBP11.18□□□□□ -0.62
HERC1-207ENST00000560316 CT45A10P0DMU9 189 aa11.18□□□□□ -0.62
HERC1-207ENST00000560316 ANXA3P12429 323 aa11.18□□□□□ -0.62
HERC1-207ENST00000560316 PLP1P60201 277 aa11.18□□□□□ -0.62
HERC1-207ENST00000560316 SRPXP78539 464 aa11.18□□□□□ -0.62
HERC1-207ENST00000560316 PATE2Q6UY27 113 aa11.18□□□□□ -0.62
HERC1-207ENST00000560316 WFDC10BQ8IUB3 73 aa11.18□□□□□ -0.62
HERC1-207ENST00000560316 CIB3Q96Q77 187 aaPredicted RBP11.18□□□□□ -0.62
HERC1-207ENST00000560316 LRP1Q07954 4544 aaKnown RBP11.17□□□□□ -0.62
HERC1-207ENST00000560316 SLC17A3O00476 420 aa11.17□□□□□ -0.62
HERC1-207ENST00000560316 SYNGR2O43760 224 aa11.17□□□□□ -0.62
HERC1-207ENST00000560316 ATP6V1G2O95670 118 aa11.17□□□□□ -0.62
HERC1-207ENST00000560316 CXCL2P19875 107 aa11.17□□□□□ -0.62
HERC1-207ENST00000560316 LCN15Q6UWW0 184 aa11.17□□□□□ -0.62
HERC1-207ENST00000560316 ZBTB8BQ8NAP8 495 aaPredicted RBP11.17□□□□□ -0.62
HERC1-207ENST00000560316 SMIM4Q8WVI0 70 aa11.17□□□□□ -0.62
HERC1-207ENST00000560316 SLC50A1Q9BRV3 221 aa11.17□□□□□ -0.62
HERC1-207ENST00000560316 ARL6Q9H0F7 186 aa11.17□□□□□ -0.62
HERC1-207ENST00000560316 MIXL1Q9H2W2 232 aa11.17□□□□□ -0.62
HERC1-207ENST00000560316 KLF12Q9Y4X4 402 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms