RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CACNG7P62955 275 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 GNG5P63218 68 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 C17orf58Q2M2W7 97 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 LYRM7Q5U5X0 104 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 FAM104BQ5XKR9 115 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 ZNF474Q6S9Z5 364 aaPredicted RBP4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 LINC00322Q6ZN03 302 aaPredicted RBP4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 ZNF788Q6ZQV5 615 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 LINC00305Q7Z4B0 112 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 COX8CQ7Z4L0 72 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 ORMDL3Q8N138 153 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 Q8N1X5 172 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 CIARTQ8N365 385 aaPredicted RBP4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 OR8A1Q8NGG7 326 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 RFESDQ8TAC1 157 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 RAB37Q96AX2 223 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 C8orf49Q96NF6 230 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 SPAG8Q99932 426 aaPredicted RBP4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 HINT2Q9BX68 163 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 SLC25A39Q9BZJ4 359 aaPredicted RBP4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 FAM234AQ9H0X4 552 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 Q9H3A6 140 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 GEMIN7Q9H840 131 aaKnown RBP4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 KLF13Q9Y2Y9 288 aaPredicted RBP4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 A0A0C4DFX4 3053 aa4.71□□□□□ -1.66
SNRPA1-209ENST00000560307 USF3Q68DE3 2245 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 IGKV1D-17A0A075B6S4 117 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 TRAV26-1A0A087WT03 109 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 H0Y8G0 127 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 KLRC4-KLRK1H3BQV0 150 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 TIMM8AO60220 97 aaPredicted RBP4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 IGKV3-15P01624 115 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 CSN3P07498 182 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 ARMS2P0C7Q2 107 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 SAA1P0DJI8 122 aaPredicted RBP4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 ACP1P24666 158 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 FXYD2P54710 66 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 TCTAP57738 103 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 HOXA4Q00056 320 aaPredicted RBP4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 FOXE3Q13461 319 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 EDDM3AQ14507 147 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 TWIST1Q15672 202 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 ZNF826PQ6ZT77 177 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 ZNF833PQ6ZTB9 187 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 MOB3BQ86TA1 216 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 DEFB119Q8N690 84 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 ZNF479Q96JC4 524 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 PRELID3AQ96N28 172 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 C1QTNF4Q9BXJ3 329 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 AKIRIN1Q9H9L7 192 aaPredicted RBP4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 PRO0461Q9UI25 63 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 TANC2Q9HCD6 1990 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 ZNF407Q9C0G0 2248 aa4.7□□□□□ -1.66
SNRPA1-209ENST00000560307 K7EM74 188 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 M0QXV9 152 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 NTN3O00634 580 aaPredicted RBP4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 SNAI2O43623 268 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 NDUFS7O75251 213 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 IGKCP01834 107 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 IGHG4P01861 327 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 IFI27P40305 119 aaPredicted RBP4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 NMUP48645 174 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 ZNF138P52744 262 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 Q0VFX4 171 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 PLGLAQ15195 96 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 RRN3P1Q2M238 152 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 ALKBH6Q3KRA9 238 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 KLF17Q5JT82 389 aaPredicted RBP4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 ZNF562Q6V9R5 426 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 S100A7AQ86SG5 101 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 C8orf31Q8N9H6 132 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 SRSF12Q8WXF0 261 aaKnown RBP4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 ZC2HC1AQ96GY0 325 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 DCTN5Q9BTE1 182 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 TTTY12Q9BZ98 90 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 MAP1LC3AQ9H492 121 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 NXT2Q9NPJ8 142 aaKnown RBP4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 RPUSD1Q9UJJ7 312 aaKnown RBP4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 ERG28Q9UKR5 140 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 LINC00312Q9Y6C7 94 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 RTTNQ86VV8 2226 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 UNC13CQ8NB66 2214 aa4.69□□□□□ -1.66
SNRPA1-209ENST00000560307 TRBV25-1A0A075B6N4 114 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 WI2-2373I1.2A0A1W2PRP0 233 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 EPOPA6NHQ4 379 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 D6R8Y8 96 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 TMEM262E9PQX1 116 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 DPM2O94777 84 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 GOSR1O95249 250 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 LHBP01229 141 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 IGLV1-44P01699 117 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 IGLV2-11P01706 119 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 MYOD1P15172 320 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 IGHV1-2P23083 117 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 FCER1GP30273 86 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 SSBP2P81877 361 aaPredicted RBP4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 FOXI1Q12951 378 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 WFDC2Q14508 124 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 C12orf74Q32Q52 190 aa4.68□□□□□ -1.66
SNRPA1-209ENST00000560307 LINC00696Q6ZRV3 163 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms