RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 PSMG4Q5JS54 123 aa8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 EBLN2Q6P2I7 272 aa8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 FOXI2Q6ZQN5 318 aa8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 TMUB2Q71RG4 321 aa8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 LYPD1Q8N2G4 141 aa8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 ACTR3CQ9C0K3 210 aaPredicted RBP8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 OR51M1Q9H341 326 aa8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 AAMDCQ9H7C9 122 aa8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 ZMAT4Q9H898 229 aa8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 UBQLN2Q9UHD9 624 aa8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 SELENOKQ9Y6D0 94 aa8.95□□□□□ -0.98
RABGGTA-215ENST00000560207 DUSP14O95147 198 aaKnown RBP8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 CDC34P49427 236 aaPredicted RBP8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 AKR1C8PQ5T2L2 129 aa8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 DPPA3Q6W0C5 159 aa8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 BAP18Q8IXM2 172 aa8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 ARL6IP6Q8N6S5 226 aa8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 STOML3Q8TAV4 291 aa8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 MRPL53Q96EL3 112 aaKnown RBP8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 PAXXQ9BUH6 204 aa8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 ZNF471Q9BX82 626 aaPredicted RBP8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 C1QTNF4Q9BXJ3 329 aa8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 ZNF331Q9NQX6 463 aaPredicted RBP8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 CYTL1Q9NRR1 136 aa8.94□□□□□ -0.98
RABGGTA-215ENST00000560207 TRBV19A0A075B6N1 114 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 OR7C2O60412 319 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 NBEAP1P0C6P0 100 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 HLA-DRB4P13762 266 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 PSG3Q16557 428 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 GCSAMLQ5JQS6 135 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 FAM74A1Q5RGS3 127 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 Q6ZWC4 215 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 LINC00052Q96N35 136 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 SPATA25Q9BR10 227 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 SLC25A2Q9BXI2 301 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 TP53TG1Q9Y2A0 90 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 HLA-DRB4X5D2U9 266 aa8.93□□□□□ -0.98
RABGGTA-215ENST00000560207 RAB5CP51148 216 aa8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 LGALSLQ3ZCW2 172 aaPredicted RBP8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 MIR17HGQ75NE6 70 aa8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 SLC51BQ86UW2 128 aa8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 APRG1Q8IVJ8 170 aa8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 RPP25LQ8N5L8 163 aaKnown RBP8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 RNF141Q8WVD5 230 aa8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 SAT2Q96F10 170 aaPredicted RBP8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 FAM167A-AS1Q96KT0 104 aa8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 CSTL1Q9H114 145 aa8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 SAV1Q9H4B6 383 aaPredicted RBP8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 TMEM167BQ9NRX6 74 aa8.92□□□□□ -0.98
RABGGTA-215ENST00000560207 TRAV5A0A0B4J249 113 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 CTXND1A0A1B0GTU2 59 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 RBMY1BA6NDE4 496 aaKnown RBP8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 RBMY1EA6NEQ0 496 aaKnown RBP8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 CXorf1O96002 111 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 AMBPP02760 352 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 RBMY1DP0C7P1 496 aaKnown RBP8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 STAG3L2P0CL84 134 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 STAG3L3P0CL85 134 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 RAB2AP61019 212 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 UBE2L3P68036 154 aaKnown RBP8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 HAGHQ16775 308 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 ACTL10Q5JWF8 245 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 MORN5Q5VZ52 161 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 FAM122CQ6P4D5 195 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 TRPT1Q86TN4 253 aaKnown RBP8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 FAM24BQ8N5W8 94 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 ZNF738Q8NE65 137 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 RXFP4Q8TDU9 374 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 RAB24Q969Q5 203 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 TM2D3Q9BRN9 247 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 NKX6-2Q9C056 277 aaPredicted RBP8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 ZNF586Q9NXT0 402 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 AGRNO00468 2067 aa8.91□□□□□ -0.98
RABGGTA-215ENST00000560207 DNAH3Q8TD57 4116 aa8.9□□□□□ -0.98
RABGGTA-215ENST00000560207 A0A0J9YX75 114 aa8.9□□□□□ -0.98
RABGGTA-215ENST00000560207 H3BMM0 161 aa8.9□□□□□ -0.98
RABGGTA-215ENST00000560207 H3BQ15 152 aa8.9□□□□□ -0.98
RABGGTA-215ENST00000560207 TEX46H3BTG2 121 aa8.9□□□□□ -0.98
RABGGTA-215ENST00000560207 CSN1S1P47710 185 aa8.9□□□□□ -0.98
RABGGTA-215ENST00000560207 FXYD5Q96DB9 178 aa8.9□□□□□ -0.98
RABGGTA-215ENST00000560207 C17orf77Q96MU5 243 aa8.9□□□□□ -0.98
RABGGTA-215ENST00000560207 CITED4Q96RK1 184 aa8.9□□□□□ -0.98
RABGGTA-215ENST00000560207 WFDC10AQ9H1F0 79 aa8.9□□□□□ -0.98
RABGGTA-215ENST00000560207 SH3BGRL3Q9H299 93 aa8.9□□□□□ -0.98
RABGGTA-215ENST00000560207 TRAV8-2A0A0B4J237 113 aa8.89□□□□□ -0.99
RABGGTA-215ENST00000560207 A0A1B0GVG6 124 aa8.89□□□□□ -0.99
RABGGTA-215ENST00000560207 SBSPONQ8IVN8 264 aa8.89□□□□□ -0.99
RABGGTA-215ENST00000560207 OR10J6PQ8NGY7 276 aa8.89□□□□□ -0.99
RABGGTA-215ENST00000560207 RPUSD4Q96CM3 377 aaKnown RBP8.89□□□□□ -0.99
RABGGTA-215ENST00000560207 PHYHIPLQ96FC7 376 aa8.89□□□□□ -0.99
RABGGTA-215ENST00000560207 SERTM2A0A1B0GWG4 89 aa8.88□□□□□ -0.99
RABGGTA-215ENST00000560207 A8MTW9 85 aa8.88□□□□□ -0.99
RABGGTA-215ENST00000560207 PYYP10082 97 aa8.88□□□□□ -0.99
RABGGTA-215ENST00000560207 PPT1P50897 306 aa8.88□□□□□ -0.99
RABGGTA-215ENST00000560207 C9orf62Q8N4C0 152 aa8.88□□□□□ -0.99
RABGGTA-215ENST00000560207 OR8A1Q8NGG7 326 aa8.88□□□□□ -0.99
RABGGTA-215ENST00000560207 SUN5Q8TC36 379 aa8.88□□□□□ -0.99
RABGGTA-215ENST00000560207 BLNKQ8WV28 456 aa8.88□□□□□ -0.99
RABGGTA-215ENST00000560207 FBLL1A6NHQ2 334 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms