RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, human

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-222	ENST00000560131	MAPKAPK5-AS1	Q8N8E1	139 aa		4.12	□□□□□ -1.75
TPM1-222	ENST00000560131	FXYD5	Q96DB9	178 aa		4.12	□□□□□ -1.75
TPM1-222	ENST00000560131	PAXX	Q9BUH6	204 aa		4.12	□□□□□ -1.75
TPM1-222	ENST00000560131	IFI27L2	Q9H2X8	130 aa		4.12	□□□□□ -1.75
TPM1-222	ENST00000560131	MED12L	Q86YW9	2145 aa		4.12	□□□□□ -1.75
TPM1-222	ENST00000560131	SRCAP	Q6ZRS2	3230 aa		4.12	□□□□□ -1.75
TPM1-222	ENST00000560131	MYO7A	Q13402	2215 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	DYSF	O75923	2080 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	IGKV1OR2-108	A0A075B7D4	117 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	TRAV26-1	A0A087WT03	109 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	IGHV1OR15-9	A0A0B4J2B8	117 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131		A0A1B0GUT8	65 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131		A0A1B0GWB2	263 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	KLRC4-KLRK1	H3BQV0	150 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	CCL24	O00175	119 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	UPK2	O00526	184 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	CCL11	P51671	97 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	CRYBA4	P53673	196 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	PAX8	Q06710	450 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	AES	Q08117	197 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	SMAGP	Q0VAQ4	97 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	GAGE5	Q13069	117 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	GAGE6	Q13070	117 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	KLRD1	Q13241	179 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	ESPL1	Q14674	2120 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	DEFB133	Q30KQ1	61 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	SPINK9	Q5DT21	86 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	PVRIG	Q6DKI7	326 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131		Q6ZR03	302 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	BAD	Q92934	168 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	GTSF1L	Q9H1H1	148 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	CXXC4	Q9H2H0	198 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	TP73-AS1	Q9UF72	201 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	PRO0461	Q9UI25	63 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	CYSLTR1	Q9Y271	337 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	INSIG2	Q9Y5U4	225 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131		R4GN57	208 aa		4.11	□□□□□ -1.75
TPM1-222	ENST00000560131	F5	P12259	2224 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131		A0A096LNJ9	63 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	TRAV3	A0A0B4J244	114 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	TCRBV4S1A1T	A0A5B7	111 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	FBLL1	A6NHQ2	334 aa	Known RBP	4.1	□□□□□ -1.75
TPM1-222	ENST00000560131		H0Y8G0	127 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131		H3BMG7	143 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131		M0QXV9	152 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	KLF7	O75840	302 aa	Predicted RBP	4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	HBD	P02042	147 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	CRYGC	P07315	174 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	CGB3	P0DN86	165 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	CGB7	P0DN87	165 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	RNASE2	P10153	161 aa	Known RBP	4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	EVI2A	P22794	236 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	CFHR2	P36980	270 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	FABP6	P51161	128 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	SUB1	P53999	127 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	MEF2C	Q06413	473 aa	Predicted RBP	4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	LTC4S	Q16873	150 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	TBC1D28	Q2M2D7	210 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	C10orf113	Q5VZT2	155 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	PDPN	Q86YL7	162 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	C11orf53	Q8IXP5	236 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	OR13A1	Q8NGR1	328 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	ITLN1	Q8WWA0	313 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	SIRPD	Q9H106	197 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	GEMIN7	Q9H840	131 aa	Known RBP	4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	LINC00574	Q9H8X3	128 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	TMEM14C	Q9P0S9	112 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131	LINC00312	Q9Y6C7	94 aa		4.1	□□□□□ -1.75
TPM1-222	ENST00000560131		A0A0U1RRA0	63 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	SERTM2	A0A1B0GWG4	89 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	IGLL5	B9A064	214 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131		K7EQM0	130 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	COX7A2P2	O60397	106 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	MOS	P00540	346 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	TCRA	P04437	139 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	IGHV4-31	P0DP07	118 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	UQCRFS1	P47985	274 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	PATE2	Q6UY27	113 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	COX8C	Q7Z4L0	72 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	YRDC	Q86U90	279 aa	Known RBP	4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	CEND1	Q8N111	149 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	ARPC1A	Q92747	370 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	ZNF414	Q96IQ9	312 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	TPPP3	Q9BW30	176 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	TMEM133	Q9H2Q1	129 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	OTOR	Q9NRC9	128 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	THYN1	Q9P016	225 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	ERG28	Q9UKR5	140 aa		4.09	□□□□□ -1.75
TPM1-222	ENST00000560131	IGLV5-45	A0A087WSX0	123 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	NCR2	O95944	276 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	IGHV4-39	P01824	125 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	SLC25A5	P05141	298 aa	Known RBP	4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	CCL2	P13500	99 aa		4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	FCGR2B	P31994	310 aa	Predicted RBP	4.08	□□□□□ -1.76
TPM1-222	ENST00000560131	HERV-K104	P63124	156 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms