RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 RPL7P18124 248 aaKnown RBP7.02□□□□□ -1.29
HERC1-206ENST00000559996 GCHFRP30047 84 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 PMS2P11Q13670 270 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 PQLC2Q6ZP29 291 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 ZNF767PQ75MW2 155 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 FAM24BQ8N5W8 94 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 SFT2D1Q8WV19 159 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 GPR82Q96P67 336 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 MAP1LC3BQ9GZQ8 125 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 MS4A6AQ9H2W1 248 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 HRH4Q9H3N8 390 aa7.02□□□□□ -1.29
HERC1-206ENST00000559996 NOTCH3Q9UM47 2321 aa7.01□□□□□ -1.29
HERC1-206ENST00000559996 K7EQG2 157 aa7.01□□□□□ -1.29
HERC1-206ENST00000559996 CXorf1O96002 111 aa7.01□□□□□ -1.29
HERC1-206ENST00000559996 HLA-DMBP28068 263 aa7.01□□□□□ -1.29
HERC1-206ENST00000559996 INSL3P51460 131 aa7.01□□□□□ -1.29
HERC1-206ENST00000559996 TAS2R45P59539 299 aa7.01□□□□□ -1.29
HERC1-206ENST00000559996 BLOC1S1P78537 153 aa7.01□□□□□ -1.29
HERC1-206ENST00000559996 BEAN1Q3B7T3 259 aa7.01□□□□□ -1.29
HERC1-206ENST00000559996 KHDC3LQ587J8 217 aa7.01□□□□□ -1.29
HERC1-206ENST00000559996 IGFL4Q6B9Z1 124 aa7.01□□□□□ -1.29
HERC1-206ENST00000559996 C20orf173Q96LM9 149 aa7.01□□□□□ -1.29
HERC1-206ENST00000559996 PKD1L1Q8TDX9 2849 aa7□□□□□ -1.29
HERC1-206ENST00000559996 TRAV25A0A0B4J276 109 aa7□□□□□ -1.29
HERC1-206ENST00000559996 A0A1B0GV50 99 aa7□□□□□ -1.29
HERC1-206ENST00000559996 OR7C2O60412 319 aa7□□□□□ -1.29
HERC1-206ENST00000559996 S100A7P31151 101 aa7□□□□□ -1.29
HERC1-206ENST00000559996 CLLU1Q5K131 121 aa7□□□□□ -1.29
HERC1-206ENST00000559996 C9orf66Q5T8R8 295 aa7□□□□□ -1.29
HERC1-206ENST00000559996 LCE3BQ5TA77 95 aa7□□□□□ -1.29
HERC1-206ENST00000559996 S100A7AQ86SG5 101 aa7□□□□□ -1.29
HERC1-206ENST00000559996 CCDC28AQ8IWP9 274 aa7□□□□□ -1.29
HERC1-206ENST00000559996 GBGT1Q8N5D6 347 aa7□□□□□ -1.29
HERC1-206ENST00000559996 STXBP6Q8NFX7 210 aa7□□□□□ -1.29
HERC1-206ENST00000559996 OR2K2Q8NGT1 345 aa7□□□□□ -1.29
HERC1-206ENST00000559996 LRRC20Q8TCA0 184 aa7□□□□□ -1.29
HERC1-206ENST00000559996 GRAMD2BQ96HH9 432 aa7□□□□□ -1.29
HERC1-206ENST00000559996 NARS2Q96I59 477 aaKnown RBP7□□□□□ -1.29
HERC1-206ENST00000559996 TMEM231Q9H6L2 316 aa7□□□□□ -1.29
HERC1-206ENST00000559996 NRN1Q9NPD7 142 aa7□□□□□ -1.29
HERC1-206ENST00000559996 ZNF331Q9NQX6 463 aaPredicted RBP7□□□□□ -1.29
HERC1-206ENST00000559996 C19orf73Q9NVV2 129 aa7□□□□□ -1.29
HERC1-206ENST00000559996 PFDN2Q9UHV9 154 aa7□□□□□ -1.29
HERC1-206ENST00000559996 YTHDF2Q9Y5A9 579 aaKnown RBP7□□□□□ -1.29
HERC1-206ENST00000559996 DNHD1Q96M86 4753 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 IGKV3-7A0A075B6H7 116 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 TRAV2A0A0B4J234 112 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 HELTA6NFD8 242 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 FAM74A7A6NL05 159 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 ZNF253O75346 499 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 CD5P06127 495 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 GALR1P47211 349 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 KRTAP10-11P60412 298 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 PDE6HQ13956 83 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 BLNKQ8WV28 456 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 KRTAP4-12Q9BQ66 201 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 MCRIP2Q9BUT9 160 aaKnown RBP6.99□□□□□ -1.29
HERC1-206ENST00000559996 RNF24Q9Y225 148 aa6.99□□□□□ -1.29
HERC1-206ENST00000559996 DNAH3Q8TD57 4116 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 A0A1W2PRE2 83 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 G3V4G9 280 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 PRB4P10163 310 aaPredicted RBP6.98□□□□□ -1.29
HERC1-206ENST00000559996 BMI1P35226 326 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 PSMB3P49720 205 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 RANP62826 216 aaKnown RBP6.98□□□□□ -1.29
HERC1-206ENST00000559996 UBE2L3P68036 154 aaKnown RBP6.98□□□□□ -1.29
HERC1-206ENST00000559996 EGFEM1PQ0D2K5 195 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 GUK1Q16774 197 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 WFDC3Q8IUB2 231 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 EXOC3-AS1Q8N2X6 119 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 DYNLRB2Q8TF09 96 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 SPAG8Q99932 426 aaPredicted RBP6.98□□□□□ -1.29
HERC1-206ENST00000559996 RARRES2Q99969 163 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 TMEM167BQ9NRX6 74 aa6.98□□□□□ -1.29
HERC1-206ENST00000559996 ZNF705FA8MVS1 300 aaPredicted RBP6.97□□□□□ -1.29
HERC1-206ENST00000559996 GGTLC3B5MD39 225 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 PRAC2D3DTV9 90 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 TEX46H3BTG2 121 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 PAGE4O60829 102 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 HBE1P02100 147 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 CD7P09564 240 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 ATF4P18848 351 aaPredicted RBP6.97□□□□□ -1.29
HERC1-206ENST00000559996 TFPI2P48307 235 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 DEFB1P60022 68 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 RPL11P62913 178 aaKnown RBP6.97□□□□□ -1.29
HERC1-206ENST00000559996 SUMO1P63165 101 aaKnown RBP6.97□□□□□ -1.29
HERC1-206ENST00000559996 SRSF3P84103 164 aaKnown RBP6.97□□□□□ -1.29
HERC1-206ENST00000559996 ODF3L2Q3SX64 289 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 RBPMS2Q6ZRY4 209 aaKnown RBP6.97□□□□□ -1.29
HERC1-206ENST00000559996 Q8N1Y9 231 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 LYPD1Q8N2G4 141 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 RNF182Q8N6D2 247 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 CITED4Q96RK1 184 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 Q9H3A6 140 aa6.97□□□□□ -1.29
HERC1-206ENST00000559996 PGPA6NDG6 321 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 C9JQL5 133 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 M0R3E3 92 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 ISLRO14498 428 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 ATP5G3P48201 142 aa6.96□□□□□ -1.3
HERC1-206ENST00000559996 MEOX2P50222 304 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms