RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TMEM14EPQ6UXP3 125 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 KRTAP13-1Q8IUC0 172 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 LINC00471Q8N535 108 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 LINC00304Q8N9R0 145 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 MORN4Q8NDC4 146 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 OR5H6Q8NGV6 325 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 AP1S3Q96PC3 154 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 CXCL16Q9H2A7 254 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 RPL26L1Q9UNX3 145 aaKnown RBP1.79□□□□□ -2.12
SPG11-218ENST00000559754 LHFPL6Q9Y693 200 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 CCDC171Q6TFL3 1326 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 DSPPQ9NZW4 1301 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 FAM135BQ49AJ0 1406 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 DLC1Q96QB1 1528 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 NCKAP5O14513 1909 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 MYH1P12882 1939 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 COL11A1P12107 1806 aaPredicted RBP1.78□□□□□ -2.12
SPG11-218ENST00000559754 DISP2A7MBM2 1401 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 ZNF705FA8MVS1 300 aaPredicted RBP1.78□□□□□ -2.12
SPG11-218ENST00000559754 C17orf112F2Z3M2 114 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 M0R2Z0 102 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 TPST1O60507 370 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 PROSCO94903 275 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 MT-ND4LP03901 98 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 TSPAN19P0C672 248 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 P0C880 135 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 MGST1P10620 155 aaKnown RBP1.78□□□□□ -2.12
SPG11-218ENST00000559754 CRYGSP22914 178 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 RAB5CP51148 216 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 MRPS36P82909 103 aaKnown RBP1.78□□□□□ -2.12
SPG11-218ENST00000559754 TMEM244Q5VVB8 128 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 Q8IYB0 196 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 FAM216BQ8N7L0 139 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 LINC00301Q8NCQ3 95 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 TSTD1Q8NFU3 115 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 CHCHD1Q96BP2 118 aaKnown RBP1.78□□□□□ -2.12
SPG11-218ENST00000559754 CGREF1Q99674 301 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 RETNLBQ9BQ08 111 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 SMIM3Q9BZL3 60 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 TAF9BQ9HBM6 251 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 LY96Q9Y6Y9 160 aa1.78□□□□□ -2.12
SPG11-218ENST00000559754 MYO9BQ13459 2157 aa1.78□□□□□ -2.13
SPG11-218ENST00000559754 NUMA1Q14980 2115 aa1.78□□□□□ -2.13
SPG11-218ENST00000559754 MPDZO75970 2070 aa1.78□□□□□ -2.13
SPG11-218ENST00000559754 KDM6AO15550 1401 aaPredicted RBP1.77□□□□□ -2.13
SPG11-218ENST00000559754 PRG4Q92954 1404 aaPredicted RBP1.77□□□□□ -2.13
SPG11-218ENST00000559754 TRAV3A0A0B4J244 114 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 TRAV1-1A0A0B4J248 108 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 UQCRQO14949 82 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 LYRM1O43325 122 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 DNAJB13P59910 316 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 ROMO1P60602 79 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 MAXP61244 160 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 NCS1P62166 190 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 QRFPP83859 136 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 GLYATL3Q5SZD4 288 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 HCP5Q6MZN7 132 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 MMGT1Q8N4V1 131 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 C9orf163Q8N9P6 203 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 SLC50A1Q9BRV3 221 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 TIMM21Q9BVV7 248 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 CALML5Q9NZT1 146 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 MYH7P12883 1935 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 SPEF2Q9C093 1822 aa1.77□□□□□ -2.13
SPG11-218ENST00000559754 KDM5CP41229 1560 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 DISP1Q96F81 1524 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 RTEL1-TNFRSF6BF6WH68 1400 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 MEIKINA0A087WXM9 373 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 A0A0G2JQZ4 141 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 SDHAF1A6NFY7 115 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 J3QR89 54 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 UBL3O95164 117 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 NCR2O95944 276 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 ZNF93P35789 620 aaPredicted RBP1.76□□□□□ -2.13
SPG11-218ENST00000559754 FOXA3P55318 350 aaPredicted RBP1.76□□□□□ -2.13
SPG11-218ENST00000559754 LSM3P62310 102 aaKnown RBP1.76□□□□□ -2.13
SPG11-218ENST00000559754 CDK5R1Q15078 307 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 TPRXLQ17RH7 258 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 HSD17B12Q53GQ0 312 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 OR4C6Q8NH72 309 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 CCL4L1Q8NHW4 92 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 POP5Q969H6 163 aaKnown RBP1.76□□□□□ -2.13
SPG11-218ENST00000559754 ERG28Q9UKR5 140 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 POLEQ07864 2286 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 MYH6P13533 1939 aa1.76□□□□□ -2.13
SPG11-218ENST00000559754 PLXNA4Q9HCM2 1894 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 NALCNQ8IZF0 1738 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 RIMS1Q86UR5 1692 aaKnown RBP1.75□□□□□ -2.13
SPG11-218ENST00000559754 CCDC160A6NGH7 325 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 OR2T8A6NH00 312 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 ZNF727A8MUV8 499 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 SMIM24O75264 130 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 IGLV1-51P01701 117 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 TCRAP04437 139 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 TPT1P13693 172 aaKnown RBP1.75□□□□□ -2.13
SPG11-218ENST00000559754 FABP4P15090 132 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 KDELR1P24390 212 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 SSR2P43308 183 aa1.75□□□□□ -2.13
SPG11-218ENST00000559754 ZNF846Q147U1 533 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms