RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SMIM12Q96EX1 92 aa9.75□□□□□ -0.85
USP3-213ENST00000559711 FMC1Q96HJ9 113 aa9.75□□□□□ -0.85
USP3-213ENST00000559711 OR5B12Q96R08 314 aa9.75□□□□□ -0.85
USP3-213ENST00000559711 IMMP2LQ96T52 175 aa9.75□□□□□ -0.85
USP3-213ENST00000559711 PYGO2Q9BRQ0 406 aa9.75□□□□□ -0.85
USP3-213ENST00000559711 TMEM160Q9NX00 188 aa9.75□□□□□ -0.85
USP3-213ENST00000559711 TGIF2-C20orf24A0A0A6YYL0 155 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 GGCTO75223 188 aaKnown RBP9.74□□□□□ -0.85
USP3-213ENST00000559711 UBE2G1P62253 170 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 PSG9Q00887 426 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 DUX5Q96PT3 197 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 PEF1Q9UBV8 284 aaKnown RBP9.74□□□□□ -0.85
USP3-213ENST00000559711 ACANP16112 2415 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 NOTCH2Q04721 2471 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 TRBV6-1A0A0K0K1D8 114 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 APOHP02749 345 aaPredicted RBP9.74□□□□□ -0.85
USP3-213ENST00000559711 S100PP25815 95 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 OR5I1Q13606 314 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 UNQ9165/PRO28630Q6UXU0 137 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 OSTCQ9NRP0 149 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 SERTAD4Q9NUC0 356 aa9.74□□□□□ -0.85
USP3-213ENST00000559711 SONP18583 2426 aaKnown RBP9.73□□□□□ -0.85
USP3-213ENST00000559711 LTAP01374 205 aa9.73□□□□□ -0.85
USP3-213ENST00000559711 FOXL1Q12952 345 aa9.73□□□□□ -0.85
USP3-213ENST00000559711 C1QL4Q86Z23 238 aa9.73□□□□□ -0.85
USP3-213ENST00000559711 FAM210BQ96KR6 192 aa9.73□□□□□ -0.85
USP3-213ENST00000559711 MLST8Q9BVC4 326 aa9.73□□□□□ -0.85
USP3-213ENST00000559711 AAMDCQ9H7C9 122 aa9.73□□□□□ -0.85
USP3-213ENST00000559711 RPH3ALQ9UNE2 315 aa9.73□□□□□ -0.85
USP3-213ENST00000559711 DNAJC9-AS1A6NH13 148 aa9.72□□□□□ -0.85
USP3-213ENST00000559711 DIRC3C9JPN6 131 aa9.72□□□□□ -0.85
USP3-213ENST00000559711 ZNF207O43670 478 aaKnown RBP9.72□□□□□ -0.85
USP3-213ENST00000559711 IGLV2-11P01706 119 aa9.72□□□□□ -0.85
USP3-213ENST00000559711 RPLP1P05386 114 aaKnown RBP9.72□□□□□ -0.85
USP3-213ENST00000559711 MEOX2P50222 304 aa9.72□□□□□ -0.85
USP3-213ENST00000559711 ERVFC1-1P60608 527 aa9.72□□□□□ -0.85
USP3-213ENST00000559711 C16orf54Q6UWD8 224 aa9.72□□□□□ -0.85
USP3-213ENST00000559711 GOLT1AQ6ZVE7 132 aa9.72□□□□□ -0.85
USP3-213ENST00000559711 ZNF331Q9NQX6 463 aaPredicted RBP9.72□□□□□ -0.85
USP3-213ENST00000559711 MLXQ9UH92 298 aa9.72□□□□□ -0.85
USP3-213ENST00000559711 MYO9AB2RTY4 2548 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 IGHV3-66A0A0C4DH42 116 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 SERTM2A0A1B0GWG4 89 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 ZNF785A8K8V0 405 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 M0R3E3 92 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 MGST1P10620 155 aaKnown RBP9.71□□□□□ -0.85
USP3-213ENST00000559711 SCGB2A2Q13296 93 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 KCNIP4Q6PIL6 250 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 FAM231DQ6ZW35 169 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 GPHB5Q86YW7 130 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 TMEM75Q8N9X5 138 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 GLMPQ8WWB7 406 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 UBE2E2Q96LR5 201 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 V9GYV3 84 aa9.71□□□□□ -0.85
USP3-213ENST00000559711 IGHV3OR16-13A0A075B7E8 117 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 IGHV3-74A0A0B4J1X5 117 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 FAM181BA6NEQ2 426 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 C1orf196B1AJZ1 125 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 K7EMT4 169 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 K7EQM0 130 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 HAX1O00165 279 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 RPS10P46783 165 aaKnown RBP9.71□□□□□ -0.86
USP3-213ENST00000559711 CSN1S1P47710 185 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 NHLRC2Q8NBF2 726 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 SGK494Q96LW2 274 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 RNASE7Q9H1E1 156 aaKnown RBP9.71□□□□□ -0.86
USP3-213ENST00000559711 ESM1Q9NQ30 184 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 IL36BQ9NZH7 164 aa9.71□□□□□ -0.86
USP3-213ENST00000559711 ANK3Q12955 4377 aaKnown RBP9.7□□□□□ -0.86
USP3-213ENST00000559711 IGHV3-49A0A0A0MS15 119 aa9.7□□□□□ -0.86
USP3-213ENST00000559711 TRAV8-1A0A0A6YYK1 113 aa9.7□□□□□ -0.86
USP3-213ENST00000559711 LOC105371267A0A1B0GV96 52 aa9.7□□□□□ -0.86
USP3-213ENST00000559711 A0A1W2PS18 150 aa9.7□□□□□ -0.86
USP3-213ENST00000559711 LGALS1P09382 135 aaKnown RBP9.7□□□□□ -0.86
USP3-213ENST00000559711 FLI1Q01543 452 aaPredicted RBP9.7□□□□□ -0.86
USP3-213ENST00000559711 PSG3Q16557 428 aa9.7□□□□□ -0.86
USP3-213ENST00000559711 FAM106AQ4KMX7 169 aa9.7□□□□□ -0.86
USP3-213ENST00000559711 IBA57Q5T440 356 aaKnown RBP9.7□□□□□ -0.86
USP3-213ENST00000559711 Q6ZSV7 163 aa9.7□□□□□ -0.86
USP3-213ENST00000559711 Q86TA4 180 aa9.7□□□□□ -0.86
USP3-213ENST00000559711 SLC50A1Q9BRV3 221 aa9.7□□□□□ -0.86
USP3-213ENST00000559711 OTOGQ6ZRI0 2925 aa9.69□□□□□ -0.86
USP3-213ENST00000559711 ZNF320A2RRD8 509 aa9.69□□□□□ -0.86
USP3-213ENST00000559711 TYMSP04818 313 aa9.69□□□□□ -0.86
USP3-213ENST00000559711 FAM3BP58499 235 aaPredicted RBP9.69□□□□□ -0.86
USP3-213ENST00000559711 RAB5BP61020 215 aa9.69□□□□□ -0.86
USP3-213ENST00000559711 TMEM183AQ8IXX5 376 aa9.69□□□□□ -0.86
USP3-213ENST00000559711 BTF3L4Q96K17 158 aa9.69□□□□□ -0.86
USP3-213ENST00000559711 SRD5A3Q9H8P0 318 aa9.69□□□□□ -0.86
USP3-213ENST00000559711 BIN3Q9NQY0 253 aa9.69□□□□□ -0.86
USP3-213ENST00000559711 DAZ1Q9NQZ3 744 aaKnown RBP9.69□□□□□ -0.86
USP3-213ENST00000559711 ZFP30Q9Y2G7 519 aa9.69□□□□□ -0.86
USP3-213ENST00000559711 TRAV9-1A0A075B6T8 112 aa9.68□□□□□ -0.86
USP3-213ENST00000559711 A0A1W2PPQ1 181 aa9.68□□□□□ -0.86
USP3-213ENST00000559711 KLHDC1Q8N7A1 406 aa9.68□□□□□ -0.86
USP3-213ENST00000559711 GRAMD2BQ96HH9 432 aa9.68□□□□□ -0.86
USP3-213ENST00000559711 PSG8Q9UQ74 426 aa9.68□□□□□ -0.86
USP3-213ENST00000559711 IGHV7-4-1A0A0J9YVY3 117 aa9.67□□□□□ -0.86
USP3-213ENST00000559711 FBLL1A6NHQ2 334 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms