RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 NEU4Q8WWR8 484 aaPredicted RBP13.04□□□□□ -0.32
SPG11-215ENST00000559193 MCRIP2Q9BUT9 160 aaKnown RBP13.04□□□□□ -0.32
SPG11-215ENST00000559193 MAP1LC3CQ9BXW4 147 aa13.04□□□□□ -0.32
SPG11-215ENST00000559193 LY6HO94772 140 aa13.03□□□□□ -0.32
SPG11-215ENST00000559193 NDUFA3O95167 84 aa13.03□□□□□ -0.32
SPG11-215ENST00000559193 PET117Q6UWS5 81 aa13.03□□□□□ -0.32
SPG11-215ENST00000559193 C8orf49Q96NF6 230 aa13.03□□□□□ -0.32
SPG11-215ENST00000559193 DPM3Q9P2X0 92 aa13.03□□□□□ -0.32
SPG11-215ENST00000559193 CCL25O15444 150 aa13.03□□□□□ -0.32
SPG11-215ENST00000559193 ARF6P62330 175 aa13.03□□□□□ -0.32
SPG11-215ENST00000559193 KLRD1Q13241 179 aa13.03□□□□□ -0.32
SPG11-215ENST00000559193 NPBQ8NG41 125 aa13.03□□□□□ -0.32
SPG11-215ENST00000559193 OR11H6Q8NGC7 330 aa13.03□□□□□ -0.32
SPG11-215ENST00000559193 FAM90A27PA6NNH2 459 aa13.02□□□□□ -0.32
SPG11-215ENST00000559193 FANCD2OSQ96PS1 177 aa13.02□□□□□ -0.33
SPG11-215ENST00000559193 RAB1BQ9H0U4 201 aa13.02□□□□□ -0.33
SPG11-215ENST00000559193 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.33
SPG11-215ENST00000559193 H0Y8G0 127 aa13.01□□□□□ -0.33
SPG11-215ENST00000559193 GNG7O60262 68 aa13.01□□□□□ -0.33
SPG11-215ENST00000559193 ZNF738Q8NE65 137 aa13.01□□□□□ -0.33
SPG11-215ENST00000559193 TPPP3Q9BW30 176 aa13.01□□□□□ -0.33
SPG11-215ENST00000559193 IGLV11-55A0A075B6I3 123 aa13.01□□□□□ -0.33
SPG11-215ENST00000559193 A0A1B0GW15 77 aa13.01□□□□□ -0.33
SPG11-215ENST00000559193 F8W735 103 aaPredicted RBP13.01□□□□□ -0.33
SPG11-215ENST00000559193 SCRT2Q9NQ03 307 aa13.01□□□□□ -0.33
SPG11-215ENST00000559193 C5orf64Q2M2E5 130 aa13□□□□□ -0.33
SPG11-215ENST00000559193 MPV17L2Q567V2 206 aa13□□□□□ -0.33
SPG11-215ENST00000559193 LINC01545Q5VT33 79 aa13□□□□□ -0.33
SPG11-215ENST00000559193 Q6AWC8 147 aa13□□□□□ -0.33
SPG11-215ENST00000559193 SLC25A34Q6PIV7 304 aa13□□□□□ -0.33
SPG11-215ENST00000559193 PMCHL2Q9BQD1 86 aa13□□□□□ -0.33
SPG11-215ENST00000559193 AP5S1Q9NUS5 200 aa13□□□□□ -0.33
SPG11-215ENST00000559193 TIMM8BQ9Y5J9 83 aaPredicted RBP13□□□□□ -0.33
SPG11-215ENST00000559193 ODF3BA8MYP8 253 aa13□□□□□ -0.33
SPG11-215ENST00000559193 PTTG1IPP53801 180 aa13□□□□□ -0.33
SPG11-215ENST00000559193 PDE6HQ13956 83 aa13□□□□□ -0.33
SPG11-215ENST00000559193 TRAV30A0A087WSZ9 112 aa12.99□□□□□ -0.33
SPG11-215ENST00000559193 A0A1W2PRD5 423 aa12.99□□□□□ -0.33
SPG11-215ENST00000559193 A0A1W2PRF3 423 aa12.99□□□□□ -0.33
SPG11-215ENST00000559193 A0A1W2PRM7 423 aa12.99□□□□□ -0.33
SPG11-215ENST00000559193 HSBP1L1C9JCN9 74 aa12.99□□□□□ -0.33
SPG11-215ENST00000559193 NDPQ00604 133 aa12.99□□□□□ -0.33
SPG11-215ENST00000559193 HES1Q14469 280 aa12.99□□□□□ -0.33
SPG11-215ENST00000559193 CSMD1Q96PZ7 3565 aa12.99□□□□□ -0.33
SPG11-215ENST00000559193 NPIPB5A8MRT5 1133 aa12.99□□□□□ -0.33
SPG11-215ENST00000559193 CEACAM3P40198 252 aa12.99□□□□□ -0.33
SPG11-215ENST00000559193 AAMDCQ9H7C9 122 aa12.99□□□□□ -0.33
SPG11-215ENST00000559193 TPRP12270 2363 aaKnown RBP12.99□□□□□ -0.33
SPG11-215ENST00000559193 CT45A10P0DMU9 189 aa12.98□□□□□ -0.33
SPG11-215ENST00000559193 MFAP4P55083 255 aa12.98□□□□□ -0.33
SPG11-215ENST00000559193 UBE2V1Q13404 147 aa12.98□□□□□ -0.33
SPG11-215ENST00000559193 ZNF493Q6ZR52 646 aa12.98□□□□□ -0.33
SPG11-215ENST00000559193 ZNF48Q96MX3 618 aaPredicted RBP12.98□□□□□ -0.33
SPG11-215ENST00000559193 ZNF747Q9BV97 191 aa12.98□□□□□ -0.33
SPG11-215ENST00000559193 TMSB15BA0A087X1C1 80 aa12.98□□□□□ -0.33
SPG11-215ENST00000559193 FA2HQ7L5A8 372 aa12.98□□□□□ -0.33
SPG11-215ENST00000559193 SH2D1AO60880 128 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 FAM106CPP0CH98 169 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 FBXL19-AS1Q494R0 122 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 FAM106AQ4KMX7 169 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 LYZL1Q6UWQ5 148 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 ARPC1AQ92747 370 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 CBY1Q9Y3M2 126 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 TACC2O95359 2948 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 TMEM213A2RRL7 107 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 K7ENP7 123 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 NCR2O95944 276 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 PRSS3P2Q8NHM4 247 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 MS4A6AQ9H2W1 248 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 ARHGAP32A7KAX9 2087 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 SPTBN2O15020 2390 aa12.97□□□□□ -0.33
SPG11-215ENST00000559193 IGKV2-40A0A087WW87 121 aaPredicted RBP12.96□□□□□ -0.33
SPG11-215ENST00000559193 A0A096LNJ9 63 aa12.96□□□□□ -0.33
SPG11-215ENST00000559193 M0R1W7 72 aa12.96□□□□□ -0.33
SPG11-215ENST00000559193 NUDT3O95989 172 aa12.96□□□□□ -0.33
SPG11-215ENST00000559193 IGKV2D-40P01614 121 aaPredicted RBP12.96□□□□□ -0.33
SPG11-215ENST00000559193 IGHV3-23P01764 117 aa12.96□□□□□ -0.33
SPG11-215ENST00000559193 LOXL1Q08397 574 aaPredicted RBP12.96□□□□□ -0.33
SPG11-215ENST00000559193 BVES-AS1Q5T3Y7 98 aa12.96□□□□□ -0.33
SPG11-215ENST00000559193 OR10AG1Q8NH19 301 aa12.96□□□□□ -0.33
SPG11-215ENST00000559193 TMEM189A5PLL7 270 aa12.96□□□□□ -0.34
SPG11-215ENST00000559193 D6R8Y8 96 aa12.96□□□□□ -0.34
SPG11-215ENST00000559193 PRTN3P24158 256 aa12.96□□□□□ -0.34
SPG11-215ENST00000559193 IFI27P40305 119 aaPredicted RBP12.96□□□□□ -0.34
SPG11-215ENST00000559193 ZNF562Q6V9R5 426 aa12.96□□□□□ -0.34
SPG11-215ENST00000559193 S100A7AQ86SG5 101 aa12.96□□□□□ -0.34
SPG11-215ENST00000559193 DYNAPQ8N1N2 210 aa12.96□□□□□ -0.34
SPG11-215ENST00000559193 C21orf62Q9NYP8 219 aa12.96□□□□□ -0.34
SPG11-215ENST00000559193 ANKHD1Q8IWZ3 2542 aaKnown RBP12.96□□□□□ -0.34
SPG11-215ENST00000559193 TLN1Q9Y490 2541 aaKnown RBP12.96□□□□□ -0.34
SPG11-215ENST00000559193 NBL1P41271 181 aa12.95□□□□□ -0.34
SPG11-215ENST00000559193 CSN1S1P47710 185 aa12.95□□□□□ -0.34
SPG11-215ENST00000559193 TTC9CQ8N5M4 171 aa12.95□□□□□ -0.34
SPG11-215ENST00000559193 U3KQK5 164 aa12.95□□□□□ -0.34
SPG11-215ENST00000559193 LOC105371242A0A075B767 164 aa12.95□□□□□ -0.34
SPG11-215ENST00000559193 SERTM2A0A1B0GWG4 89 aa12.95□□□□□ -0.34
SPG11-215ENST00000559193 CDSNQ15517 529 aa12.95□□□□□ -0.34
SPG11-215ENST00000559193 AMN1Q8IY45 258 aa12.95□□□□□ -0.34
SPG11-215ENST00000559193 DCHS2Q6V1P9 2916 aa12.95□□□□□ -0.34
SPG11-215ENST00000559193 PSG9Q00887 426 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms